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hypothetical_protein_MIV019R

Euk-Vir

Invertebrate_iridescent_virus_3

hypothetical_protein_MIV019R__YP_654591__Invertebrate_iridescent_virus_3__345201

Identity

Accession:
YP_654591 ↗
Protein ID:
hypothetical_protein_MIV019R
Kingdom:
euk

Quality

80.4 mean pLDDT

Taxonomy

Bamfordvirae› Nucleocytoviricota› Megaviricetes› Pimascovirales› Iridoviridae› Chloriridovirus› Invertebrate_iridescent_virus_3

TaxID: 345201

Cluster

View cluster (42 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 13-129
PDB
Domain cluster: rep: IMGVR_UViG_3300000568_000096-3300000568-Draft_1006303631__D8-117
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF02498.23 best Bro-N 78.3 7.70e-22 90.6% 90.6%
D2 high residues 192-324
PDB
Domain cluster: rep: MTG-like_gene_family_protein__YP_009001723__Anomala_cuprea_entomopoxvirus__62099__D191-355
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF10544.16 best T5orf172 49.6 6.50e-13 69.2% 98.0%
D3 high residues 330-404
PDB
Domain cluster: rep: MTG-like_gene_family_protein__YP_009001487__Anomala_cuprea_entomopoxvirus__62099__D358-424
CATH (32)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3dteA02 1.10.10.1030 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › IrrE, HTH domain 0.82 45.0 5.75e-01 72.0% 100.0%
2dceA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 50.0 5.05e-01 97.3% 73.7%
1le8A00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.71 45.0 5.14e-01 89.3% 92.5%
1sd4A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 52.0 5.57e-01 100.0% 93.8%
2p5kA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 51.0 5.54e-01 100.0% 95.2%
4fcyA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.68 45.0 4.48e-01 90.7% 65.4%
2om6A02 1.10.150.400 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 0.68 48.0 4.76e-01 77.3% 70.9%
2g9wA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 52.0 5.48e-01 90.7% 94.0%
1bifA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.65 44.0 3.26e-01 100.0% 26.2%
1gkuB06 1.10.460.10 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; domain 2 › Topoisomerase I, domain 2 0.59 47.0 3.84e-01 92.0% 59.6%
2p6vA00 1.20.120.1110 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › TAFH/NHR1 domain 0.58 48.0 4.46e-01 94.7% 93.8%
3e1sA01 1.10.10.2220 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.57 49.0 4.61e-01 100.0% 78.9%
3rmqA02 6.10.140.1650 Special › Helix non-globular › Helix Hairpins › 0.56 35.0 3.99e-01 80.0% 83.9%
2esnA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 42.0 4.06e-01 96.0% 69.7%
4km3B00 3.90.230.10 Alpha Beta › Alpha-Beta Complex › Creatine Amidinohydrolase › Creatinase/methionine aminopeptidase superfamily 0.56 47.0 3.27e-01 97.3% 47.3%
3of4A00 3.40.109.10 Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase 0.56 44.0 3.28e-01 88.0% 44.4%
1zp2A02 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.55 47.0 4.10e-01 93.3% 84.8%
4pxoA02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.55 43.0 3.67e-01 86.7% 91.6%
1z21A00 1.10.10.1000 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Type III secretion system virulence factor YopR, core domain 0.55 48.0 4.50e-01 100.0% 82.3%
1l9lA00 1.10.225.10 Mainly Alpha › Orthogonal Bundle › NK-Lysin › Saposin-like 0.54 42.0 4.22e-01 92.0% 87.8%
4me3A01 3.30.1640.10 Alpha Beta › 2-Layer Sandwich › mini-chromosome maintenance (MCM) complex, chain A, domain 1 › mini-chromosome maintenance (MCM) complex, chain A, domain 1 0.54 45.0 4.31e-01 100.0% 91.5%
2rdcA00 1.10.287.800 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › protein ne1242 0.53 44.0 3.73e-01 94.7% 85.0%
6xxvC00 1.10.132.20 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor 0.53 45.0 4.05e-01 98.7% 88.3%
3fdiB00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.53 43.0 3.28e-01 89.3% 83.8%
7vb8A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 45.0 4.03e-01 98.7% 71.7%
4cvuA03 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.52 41.0 2.62e-01 98.7% 16.7%
3lw7A00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.52 42.0 3.26e-01 88.0% 82.9%
4bxoA02 1.10.150.20 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain 0.52 33.0 3.45e-01 86.7% 71.6%
3n2oA02 3.20.20.10 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Alanine racemase 0.52 45.0 3.10e-01 100.0% 96.1%
2va8A03 1.10.3380.30 Mainly Alpha › Orthogonal Bundle › Sec63 N-terminal domain-like fold › 0.52 40.0 2.94e-01 86.7% 59.5%
3cm0A00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.51 39.0 2.99e-01 84.0% 36.4%
1chkA01 1.20.141.10 Mainly Alpha › Up-down Bundle › Chitosanase, subunit A; domain 1 › Chitosanase, subunit A, domain 1 0.51 40.0 3.36e-01 90.7% 73.4%
ECOD (43)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4983598 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.76 55.0 5.84e-01 98.7% 87.7%
4938693 101.1.2.70 ↗ alpha arrays › HTH › HTH › winged helix domain › PqqD 0.73 50.0 4.82e-01 90.7% 62.4%
3930245 101.1.2.407 ↗ alpha arrays › HTH › HTH › winged helix domain › WHD_ORC2 0.72 63.0 5.48e-01 94.7% 69.1%
3257129 101.1.2.407 ↗ alpha arrays › HTH › HTH › winged helix domain › WHD_ORC2 0.71 61.0 5.19e-01 94.7% 62.5%
4995680 101.35.1.0 ↗ alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX 0.70 52.0 5.71e-01 96.0% 100.0%
3473648 101.1.2.312 ↗ alpha arrays › HTH › HTH › winged helix domain › MSC 0.70 58.0 3.96e-01 92.0% 28.9%
4931473 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.70 54.0 5.70e-01 98.7% 95.4%
4928472 101.1.2.70 ↗ alpha arrays › HTH › HTH › winged helix domain › PqqD 0.69 47.0 4.66e-01 93.3% 66.3%
5035859 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.69 55.0 5.60e-01 92.0% 86.5%
4946851 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.69 58.0 4.76e-01 100.0% 52.3%
2478 101.1.1.15 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_Mu_1 0.67 44.0 4.06e-01 90.7% 51.5%
3239643 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.67 52.0 5.55e-01 98.7% 98.5%
3473498 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.66 56.0 5.45e-01 94.7% 90.6%
3331123 101.35.1.23 ↗ alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › Ovate 0.66 49.0 5.29e-01 90.7% 100.0%
4972208 101.1.2.57 ↗ alpha arrays › HTH › HTH › winged helix domain › EAP30 0.66 58.0 5.48e-01 98.7% 87.8%
3700785 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.65 50.0 5.25e-01 100.0% 100.0%
3979215 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.65 43.0 4.81e-01 77.3% 92.7%
5049306 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.65 56.0 4.85e-01 96.0% 64.3%
4008061 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.65 52.0 5.22e-01 100.0% 88.0%
1175749 101.1.2.145 ↗ alpha arrays › HTH › HTH › winged helix domain › HHH_4 0.64 49.0 4.71e-01 100.0% 72.1%
3814573 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.64 53.0 4.80e-01 93.3% 69.5%
4345084 4973.1.1.0 ↗ alpha bundles › helical domain in DNA primase DnaG catalytic core › helical domain in DNA primase DnaG catalytic core › helical domain in DNA primase DnaG catalytic core 0.63 43.0 4.37e-01 93.3% 72.0%
3809378 101.1.2.10 ↗ alpha arrays › HTH › HTH › winged helix domain › Linker_histone 0.62 50.0 5.14e-01 100.0% 95.7%
3880787 101.1.2.526 ↗ alpha arrays › HTH › HTH › winged helix domain › PF27602 0.62 51.0 4.59e-01 94.7% 69.1%
3286147 101.1.2.25 ↗ alpha arrays › HTH › HTH › winged helix domain › FUR 0.62 54.0 4.43e-01 98.7% 59.3%
3571987 101.1.2.24 ↗ alpha arrays › HTH › HTH › winged helix domain › MAGE 0.61 51.0 4.84e-01 93.3% 85.6%
1551401 3869.1.1.1 ↗ alpha arrays › Mitochondrial 54S ribosomal protein L2 › Mitochondrial 54S ribosomal protein L2 › Mitochondrial 54S ribosomal protein L2 › Ribosomal_L27_C 0.61 50.0 3.62e-01 92.0% 37.9%
3694484 2003.1.2.18 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.61 51.0 3.21e-01 98.7% 64.5%
3724203 244.1.1.6 ↗ a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C › Amino_oxidase 0.60 51.0 3.21e-01 100.0% 64.3%
3279756 101.1.2.25 ↗ alpha arrays › HTH › HTH › winged helix domain › FUR 0.60 53.0 4.36e-01 100.0% 58.6%
3908545 101.1.2.4 ↗ alpha arrays › HTH › HTH › winged helix domain › Forkhead 0.59 49.0 4.32e-01 93.3% 67.8%
3838246 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.58 49.0 4.41e-01 96.0% 80.9%
3537242 101.1.2.34 ↗ alpha arrays › HTH › HTH › winged helix domain › RFX_DNA_binding 0.58 52.0 4.75e-01 100.0% 76.0%
4936336 230.4.1.1 ↗ a+b two layers › T-fold › ApbE-like › ApbE-like › ApbE 0.58 44.0 3.39e-01 84.0% 85.0%
4025332 2003.1.2.24 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 0.58 51.0 3.25e-01 100.0% 42.6%
4970900 632.7.1.0 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain 0.56 38.0 3.63e-01 70.7% 70.0%
None — 0.55 48.0 3.12e-01 98.7% 53.5%
4076872 2003.1.2.24 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 0.54 48.0 3.14e-01 98.7% 53.5%
None — 0.54 47.0 3.12e-01 98.7% 53.5%
4394509 2004.1.1.188 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Cytidylate_kin2 0.54 43.0 3.23e-01 88.0% 70.5%
3655985 10.12.1.3 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_1 0.53 44.0 3.72e-01 90.7% 100.0%
None — 0.51 41.0 2.99e-01 89.3% 34.5%
3972782 148.1.3.172 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_14 0.51 40.0 3.82e-01 98.7% 72.9%
D4 medium residues 138-191
PDB
Domain cluster: representative