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hypothetical_protein_MIV021L
Euk-VirInvertebrate_iridescent_virus_3
hypothetical_protein_MIV021L__YP_654593__Invertebrate_iridescent_virus_3__345201
Identity
- Accession:
- YP_654593 ↗
- Protein ID:
- hypothetical_protein_MIV021L
- Kingdom:
- euk
Quality
71.3
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Megaviricetes›
Pimascovirales›
Iridoviridae›
Chloriridovirus›
Invertebrate_iridescent_virus_3
TaxID: 345201
Cluster
View cluster (2 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 129-203
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF13920.13 best | zf-C3HC4_3 | 48.8 | 6.90e-13 | 65.3% | 91.8% |
CATH (22)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2yhoE00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.93 | 70.0 | 7.30e-01 | 85.3% | 84.3% |
| 4r7eA00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.89 | 71.0 | 7.44e-01 | 84.0% | 95.7% |
| 5trbA00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.84 | 66.0 | 6.84e-01 | 82.7% | 94.2% |
| 2cklB01 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.82 | 57.0 | 5.83e-01 | 72.0% | 83.1% |
| 3lrqB00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.80 | 64.0 | 6.32e-01 | 85.3% | 82.5% |
| 2ma6A00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.80 | 55.0 | 6.05e-01 | 73.3% | 88.5% |
| 5eyaF00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.78 | 54.0 | 5.43e-01 | 72.0% | 78.9% |
| 2y43A00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.77 | 63.0 | 5.94e-01 | 88.0% | 73.9% |
| 5dinA00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.76 | 54.0 | 4.59e-01 | 74.7% | 47.5% |
| 5mnjH00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.75 | 51.0 | 5.47e-01 | 70.7% | 87.5% |
| 1rmdA01 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.74 | 56.0 | 5.36e-01 | 80.0% | 72.1% |
| 2ecgA00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.74 | 60.0 | 6.09e-01 | 100.0% | 89.3% |
| 3l11A00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.73 | 52.0 | 4.64e-01 | 74.7% | 62.5% |
| 5dkaA00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.73 | 50.0 | 4.57e-01 | 70.7% | 55.2% |
| 3ddtC00 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.71 | 41.0 | 4.94e-01 | 73.3% | 95.5% |
| 4wz0A00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.69 | 52.0 | 4.63e-01 | 81.3% | 56.0% |
| 2ldrA00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.69 | 49.0 | 4.81e-01 | 76.0% | 69.5% |
| 2djaA00 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.68 | 41.0 | 3.95e-01 | 74.7% | 52.4% |
| 2bayE00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.68 | 47.0 | 5.13e-01 | 72.0% | 93.2% |
| 3ng2B00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.67 | 47.0 | 4.97e-01 | 73.3% | 88.1% |
| 2yvrA00 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.66 | 38.0 | 4.56e-01 | 74.7% | 93.3% |
| 2csvA00 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.66 | 39.0 | 4.00e-01 | 78.7% | 61.1% |
ECOD (82)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3370810 | 376.1.1.22 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_3 | 0.97 | 68.0 | 8.00e-01 | 76.0% | 98.2% |
| 3822895 | 376.1.1.22 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_3 | 0.97 | 73.0 | 7.99e-01 | 81.3% | 92.1% |
| 3998169 | 376.1.1.22 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_3 | 0.95 | 76.0 | 8.20e-01 | 82.7% | 98.5% |
| 4886797 | 376.1.1.22 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_3 | 0.94 | 76.0 | 7.58e-01 | 88.0% | 81.8% |
| 3392356 | 376.1.1.22 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_3 | 0.93 | 63.0 | 6.93e-01 | 73.3% | 82.5% |
| 3595411 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.93 | 63.0 | 7.11e-01 | 70.7% | 88.1% |
| 3606012 | 376.1.1.22 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_3 | 0.93 | 60.0 | 7.05e-01 | 70.7% | 90.9% |
| 3469438 | 376.1.1.22 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_3 | 0.93 | 82.0 | 7.64e-01 | 98.7% | 77.8% |
| 3782724 | 376.1.1.22 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_3 | 0.91 | 63.0 | 7.03e-01 | 70.7% | 93.2% |
| 3671724 | 376.1.1.22 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_3 | 0.91 | 70.0 | 7.86e-01 | 80.0% | 100.0% |
| 3841616 | 376.1.1.22 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_3 | 0.91 | 75.0 | 7.81e-01 | 85.3% | 95.7% |
| 3666739 | 376.1.1.22 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_3 | 0.91 | 62.0 | 6.70e-01 | 70.7% | 84.6% |
| 3594564 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.90 | 65.0 | 6.78e-01 | 78.7% | 80.0% |
| 3607912 | 376.1.1.22 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_3 | 0.90 | 61.0 | 7.09e-01 | 72.0% | 94.5% |
| 3397810 | 376.1.1.22 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_3 | 0.90 | 64.0 | 5.27e-01 | 74.7% | 45.8% |
| 3675514 | 376.1.1.22 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_3 | 0.89 | 66.0 | 6.84e-01 | 76.0% | 81.4% |
| 3485528 | 5046.1.1.194 ↗ | extended segments › F-type ATP synthase subunit b › F-type ATP synthase subunit b › F-type ATP synthase subunit b › zf-C3HC4 | 0.89 | 71.0 | 4.72e-01 | 84.0% | 25.4% |
| 3725332 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.89 | 61.0 | 5.85e-01 | 70.7% | 81.9% |
| 3225382 | 376.1.1.22 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_3 | 0.88 | 71.0 | 7.67e-01 | 84.0% | 96.9% |
| 4529546 | 376.1.1.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 | 0.88 | 70.0 | 6.11e-01 | 82.7% | 61.9% |
| 4148983 | 376.1.1.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 | 0.88 | 67.0 | 7.22e-01 | 80.0% | 96.9% |
| 3540501 | 376.1.1.22 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_3 | 0.87 | 64.0 | 7.10e-01 | 84.0% | 95.0% |
| 3608535 | 376.1.1.22 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_3 | 0.87 | 60.0 | 6.05e-01 | 78.7% | 70.7% |
| 3996841 | 376.1.1.22 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_3 | 0.87 | 60.0 | 6.40e-01 | 70.7% | 93.8% |
| 3403866 | 376.1.1.22 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_3 | 0.86 | 59.0 | 5.40e-01 | 70.7% | 64.2% |
| 4488278 | 376.1.1.22 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_3 | 0.86 | 67.0 | 5.40e-01 | 81.3% | 48.5% |
| 4564843 | 376.1.1.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 | 0.86 | 67.0 | 5.74e-01 | 82.7% | 57.0% |
| 3928312 | 376.1.1.22 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_3 | 0.86 | 75.0 | 7.35e-01 | 98.7% | 88.7% |
| 3676856 | 376.1.1.22 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_3 | 0.85 | 64.0 | 6.85e-01 | 77.3% | 90.8% |
| 3799493 | 109.4.1.801 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › zf-C3HC4_3 | 0.85 | 55.0 | 3.45e-01 | 73.3% | 14.3% |
| 4024984 | 376.1.1.22 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_3 | 0.84 | 57.0 | 6.36e-01 | 70.7% | 98.3% |
| 3559763 | 376.1.1.22 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_3 | 0.84 | 62.0 | 6.93e-01 | 78.7% | 96.7% |
| 3249904 | 376.1.1.20 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_UBOX | 0.84 | 65.0 | 6.42e-01 | 86.7% | 77.5% |
| 3994535 | 3755.3.1.137 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › zf-C3HC4_3 | 0.82 | 70.0 | 5.73e-01 | 100.0% | 51.9% |
| 3531184 | 376.1.1.23 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_2 | 0.82 | 58.0 | 5.53e-01 | 73.3% | 65.9% |
| 3998855 | 376.1.1.22 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_3 | 0.82 | 56.0 | 5.80e-01 | 70.7% | 92.9% |
| 3180912 | 376.1.1.20 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_UBOX | 0.82 | 68.0 | 5.04e-01 | 88.0% | 39.1% |
| 4024061 | 376.1.1.20 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_UBOX | 0.81 | 64.0 | 6.04e-01 | 84.0% | 71.1% |
| 3570018 | 376.1.1.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 | 0.81 | 75.0 | 4.83e-01 | 100.0% | 24.8% |
| 3416902 | 192.8.1.119 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain › zf-C3HC4 | 0.81 | 71.0 | 4.60e-01 | 94.7% | 23.2% |
| 3779926 | 376.1.1.22 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_3 | 0.81 | 54.0 | 5.53e-01 | 70.7% | 71.2% |
| 4528585 | 376.1.1.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 | 0.81 | 69.0 | 4.66e-01 | 90.7% | 28.0% |
| 3687275 | 376.1.1.22 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_3 | 0.80 | 63.0 | 5.49e-01 | 81.3% | 67.6% |
| 4630831 | 376.1.1.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 | 0.80 | 73.0 | 6.84e-01 | 98.7% | 84.4% |
| 3860997 | 376.1.1.22 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_3 | 0.80 | 66.0 | 6.86e-01 | 96.0% | 95.7% |
| 3215339 | 376.1.1.23 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_2 | 0.80 | 55.0 | 5.32e-01 | 72.0% | 63.5% |
| 3739407 | 376.1.1.23 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_2 | 0.80 | 61.0 | 6.02e-01 | 81.3% | 77.5% |
| 3651050 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.80 | 63.0 | 5.94e-01 | 84.0% | 71.1% |
| 3430514 | 376.1.1.23 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_2 | 0.80 | 64.0 | 6.16e-01 | 85.3% | 75.3% |
| 4423910 | 376.1.1.22 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_3 | 0.80 | 55.0 | 6.15e-01 | 74.7% | 90.0% |
| 3254172 | 73.1.1.1 ↗ | beta sandwiches › SMAD/FHA domain › SMAD/FHA domain › SMAD/FHA domain › FHA | 0.80 | 57.0 | 3.94e-01 | 74.7% | 24.3% |
| 3251626 | 376.1.1.22 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_3 | 0.80 | 70.0 | 7.10e-01 | 97.3% | 100.0% |
| 3596936 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.79 | 58.0 | 6.05e-01 | 76.0% | 100.0% |
| 3829581 | 376.1.1.22 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_3 | 0.79 | 55.0 | 5.87e-01 | 72.0% | 96.9% |
| 3756089 | 376.1.1.22 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_3 | 0.78 | 60.0 | 5.93e-01 | 81.3% | 76.2% |
| 3786153 | 376.1.1.23 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_2 | 0.78 | 63.0 | 5.37e-01 | 86.7% | 55.7% |
| 3591166 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.78 | 63.0 | 5.46e-01 | 85.3% | 66.4% |
| 3690337 | 376.1.1.23 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_2 | 0.78 | 69.0 | 6.90e-01 | 97.3% | 94.7% |
| 3849195 | 376.1.1.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 | 0.78 | 69.0 | 5.57e-01 | 100.0% | 52.4% |
| 4515977 | 376.1.1.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 | 0.78 | 68.0 | 5.83e-01 | 98.7% | 61.7% |
| 3832761 | 376.1.1.22 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_3 | 0.77 | 64.0 | 4.54e-01 | 90.7% | 32.0% |
| 4272127 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.77 | 59.0 | 5.47e-01 | 84.0% | 64.2% |
| 3210749 | 376.1.1.22 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_3 | 0.77 | 60.0 | 5.98e-01 | 81.3% | 87.2% |
| 3668905 | 376.1.1.23 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_2 | 0.77 | 71.0 | 6.14e-01 | 98.7% | 70.0% |
| 3263768 | 376.1.1.22 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_3 | 0.77 | 58.0 | 6.36e-01 | 84.0% | 98.3% |
| 4012449 | 376.1.1.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 | 0.77 | 53.0 | 5.06e-01 | 70.7% | 63.5% |
| 3667523 | 192.8.1.119 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain › zf-C3HC4 | 0.77 | 71.0 | 4.74e-01 | 98.7% | 30.2% |
| 3632969 | 192.8.1.0 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain | 0.77 | 69.0 | 4.67e-01 | 100.0% | 28.1% |
| 3511172 | 376.1.1.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 | 0.76 | 69.0 | 4.95e-01 | 98.7% | 36.1% |
| 3829429 | 192.8.1.132 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain › zf-C3HC4_3 | 0.76 | 69.0 | 5.13e-01 | 98.7% | 43.3% |
| 3179643 | 376.1.1.23 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_2 | 0.76 | 54.0 | 5.45e-01 | 74.7% | 84.0% |
| 3653237 | 376.1.1.22 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_3 | 0.76 | 57.0 | 5.75e-01 | 80.0% | 85.3% |
| 3821195 | 376.1.1.23 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_2 | 0.76 | 65.0 | 6.00e-01 | 93.3% | 75.8% |
| 167367 | 376.1.1.22 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_3 | 0.75 | 60.0 | 6.25e-01 | 98.7% | 94.1% |
| 3481026 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.75 | 59.0 | 5.56e-01 | 84.0% | 70.0% |
| 3867225 | 376.1.1.22 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_3 | 0.75 | 57.0 | 5.59e-01 | 80.0% | 75.0% |
| 3224515 | 376.1.1.22 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_3 | 0.73 | 62.0 | 6.00e-01 | 97.3% | 84.7% |
| 3641037 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.73 | 57.0 | 5.53e-01 | 85.3% | 80.0% |
| 3430951 | 376.1.1.22 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_3 | 0.71 | 60.0 | 5.75e-01 | 100.0% | 80.7% |
| 3311630 | 376.1.1.22 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_3 | 0.71 | 50.0 | 4.75e-01 | 74.7% | 63.3% |
| 3452792 | 376.1.1.20 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_UBOX | 0.69 | 52.0 | 4.87e-01 | 80.0% | 65.6% |
| 4021100 | 376.1.1.23 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_2 | 0.68 | 56.0 | 4.66e-01 | 89.3% | 56.2% |
D2
medium
residues 1-52
Domain cluster:
representative
CATH (23)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1a62A01 | 1.10.720.10 | Mainly Alpha › Orthogonal Bundle › Transcription Termination Factor Rho, Rna-binding Domain; Chain A, Domain 1 › | 0.91 | 72.0 | 7.65e-01 | 98.1% | 95.7% |
| 3l0oA01 | 1.10.720.10 | Mainly Alpha › Orthogonal Bundle › Transcription Termination Factor Rho, Rna-binding Domain; Chain A, Domain 1 › | 0.76 | 61.0 | 6.26e-01 | 100.0% | 93.9% |
| 4ci1B03 | 1.20.58.1480 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.65 | 53.0 | 4.90e-01 | 94.2% | 97.1% |
| 4huqA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.62 | 42.0 | 2.65e-01 | 82.7% | 13.0% |
| 2yu1A02 | 1.20.58.1360 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.61 | 46.0 | 3.69e-01 | 82.7% | 80.2% |
| 2x1dA02 | 1.10.10.2120 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.61 | 43.0 | 3.88e-01 | 76.9% | 93.2% |
| 1k82A02 | 1.10.8.50 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.60 | 49.0 | 3.68e-01 | 90.4% | 55.3% |
| 1i4wA02 | 1.10.8.100 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › rRNA adenine dimethylase, C-terminal domain | 0.59 | 48.0 | 4.40e-01 | 96.2% | 92.0% |
| 4a17U01 | 1.10.287.310 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.59 | 43.0 | 3.73e-01 | 76.9% | 77.9% |
| 1ofcX04 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.59 | 46.0 | 3.77e-01 | 92.3% | 46.8% |
| 3w0fA02 | 1.10.8.50 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.59 | 48.0 | 3.53e-01 | 90.4% | 50.0% |
| 6ifsB02 | 1.10.8.100 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › rRNA adenine dimethylase, C-terminal domain | 0.59 | 48.0 | 4.33e-01 | 90.4% | 100.0% |
| 2vf7B03 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.59 | 41.0 | 2.58e-01 | 75.0% | 14.8% |
| 7k5cB01 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.57 | 47.0 | 3.48e-01 | 100.0% | 43.4% |
| 1gksA00 | 1.10.760.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome Bc1 Complex; Chain D, domain 2 › Cytochrome c-like domain | 0.57 | 42.0 | 3.77e-01 | 82.7% | 64.1% |
| 4finB01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.56 | 49.0 | 3.12e-01 | 100.0% | 36.4% |
| 2kjgA00 | 1.20.120.970 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.54 | 38.0 | 3.20e-01 | 76.9% | 54.5% |
| 2iw3A04 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.54 | 43.0 | 3.01e-01 | 100.0% | 30.0% |
| 5gkoA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.54 | 45.0 | 2.93e-01 | 98.1% | 49.0% |
| 1yiqA02 | 1.10.760.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome Bc1 Complex; Chain D, domain 2 › Cytochrome c-like domain | 0.54 | 39.0 | 3.22e-01 | 82.7% | 42.5% |
| 1h99A02 | 1.10.1790.10 | Mainly Alpha › Orthogonal Bundle › PTS-regulatory domain, PRD › PRD domain | 0.53 | 44.0 | 3.61e-01 | 98.1% | 69.8% |
| 1vq8V00 | 1.10.287.310 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.53 | 42.0 | 3.88e-01 | 84.6% | 86.2% |
| 4nxtA01 | 1.10.1410.40 | Mainly Alpha › Orthogonal Bundle › Poly(a)-polymerase, middle domain › | 0.52 | 41.0 | 3.16e-01 | 98.1% | 62.8% |
ECOD (17)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4062718 | 130.1.1.3 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif › Rho_N | 0.89 | 74.0 | 7.51e-01 | 100.0% | 94.0% |
| 3252120 | 130.1.1.0 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif | 0.86 | 71.0 | 6.27e-01 | 100.0% | 62.7% |
| 3296907 | 605.1.1.153 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › Wbp11 | 0.71 | 37.0 | 3.05e-01 | 78.8% | 28.9% |
| 3486170 | 110.1.1.0 ↗ | alpha arrays › DEATH domain › DEATH domain › DEATH domain | 0.66 | 56.0 | 4.55e-01 | 100.0% | 57.1% |
| 3555324 | 102.2.1.0 ↗ | alpha arrays › HhH/H2TH › H2TH › H2TH | 0.63 | 52.0 | 4.20e-01 | 98.1% | 68.2% |
| 3300206 | 103.1.1.0 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain | 0.62 | 50.0 | 4.64e-01 | 88.5% | 100.0% |
| 1884041 | 5051.1.1.10 ↗ | alpha complex topology › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › AA_permease_2 | 0.62 | 48.0 | 2.88e-01 | 88.5% | 75.1% |
| 3208854 | 2004.1.1.430 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran, ABC_tran_Xtn | 0.60 | 50.0 | 2.87e-01 | 100.0% | 13.1% |
| 3960230 | 102.2.1.4 ↗ | alpha arrays › HhH/H2TH › H2TH › H2TH › H2TH | 0.59 | 50.0 | 3.92e-01 | 100.0% | 65.0% |
| 3193554 | 2004.1.1.5 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran | 0.59 | 51.0 | 3.21e-01 | 100.0% | 29.8% |
| 3508095 | 6155.1.1.4 ↗ | alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter › MPC | 0.58 | 38.0 | 2.85e-01 | 100.0% | 31.8% |
| 4265829 | 102.2.1.0 ↗ | alpha arrays › HhH/H2TH › H2TH › H2TH | 0.57 | 49.0 | 4.41e-01 | 98.1% | 98.7% |
| 1309101 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.57 | 50.0 | 3.03e-01 | 98.1% | 58.4% |
| 3423523 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.56 | 42.0 | 3.57e-01 | 82.7% | 82.2% |
| 3451103 | 102.2.1.6 ↗ | alpha arrays › HhH/H2TH › H2TH › H2TH › HI0933_like_1st | 0.55 | 45.0 | 4.08e-01 | 98.1% | 94.7% |
| 3598908 | 192.4.1.0 ↗ | alpha bundles › Long alpha-hairpin › Ribosomal protein L29 (L29p) › Ribosomal protein L29 (L29p) | 0.54 | 43.0 | 4.09e-01 | 84.6% | 85.0% |
| 3189269 | 3184.1.1.1 ↗ | alpha bundles › mRNA 3'-end-processing protein Rna15p hinge domain › mRNA 3'-end-processing protein Rna15p hinge domain › mRNA 3'-end-processing protein Rna15p hinge domain › CSTF2_hinge | 0.52 | 40.0 | 3.37e-01 | 82.7% | 69.9% |