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hypothetical_protein_MIV039R

Euk-Vir

Invertebrate_iridescent_virus_3

hypothetical_protein_MIV039R__YP_654611__Invertebrate_iridescent_virus_3__345201

Identity

Accession:
YP_654611 ↗
Protein ID:
hypothetical_protein_MIV039R
Kingdom:
euk

Quality

72.0 mean pLDDT

Taxonomy

Bamfordvirae› Nucleocytoviricota› Megaviricetes› Pimascovirales› Iridoviridae› Chloriridovirus› Invertebrate_iridescent_virus_3

TaxID: 345201

Cluster

View cluster (37 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 79-266
PDB
Domain cluster: rep: hypothetical_protein_F8204_gp086__YP_009702079__Heliothis_virescens_ascovirus_3g__1246651__D76-202_214-282
CATH (11)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3qwuA02 3.30.470.30 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › DNA ligase/mRNA capping enzyme 0.67 59.0 6.01e-01 94.7% 97.8%
4glwA01 3.30.470.30 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › DNA ligase/mRNA capping enzyme 0.64 55.0 5.23e-01 92.0% 94.1%
2hivA02 3.30.470.30 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › DNA ligase/mRNA capping enzyme 0.61 55.0 5.35e-01 95.7% 97.6%
6imjA01 3.30.470.30 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › DNA ligase/mRNA capping enzyme 0.61 54.0 5.44e-01 93.6% 100.0%
6rarI01 3.30.470.30 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › DNA ligase/mRNA capping enzyme 0.61 54.0 5.38e-01 94.1% 100.0%
2cfmA02 3.30.470.30 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › DNA ligase/mRNA capping enzyme 0.59 52.0 5.16e-01 94.1% 97.5%
2kjzA01 3.30.720.120 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › 0.59 17.0 3.39e-01 96.8% 94.4%
4pz6A02 3.30.470.30 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › DNA ligase/mRNA capping enzyme 0.56 50.0 4.65e-01 95.2% 84.3%
8egxA01 2.60.40.60 Mainly Beta › Sandwich › Immunoglobulin-like › Cadherins 0.53 27.0 3.68e-01 96.3% 100.0%
1ywmA01 2.60.500.10 Mainly Beta › Sandwich › Surface Active Protein fold › Surface Active Protein domain 0.51 24.0 3.24e-01 95.7% 85.7%
3og4B01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.50 28.0 3.53e-01 97.9% 94.2%
ECOD (28)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3708389 206.1.3.24 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › RNA_lig_T4_1 0.74 70.0 5.57e-01 100.0% 63.7%
3271939 206.1.3.24 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › RNA_lig_T4_1 0.72 68.0 5.75e-01 99.5% 73.1%
193072 206.1.3.23 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › RNA_ligase 0.70 65.0 5.97e-01 98.4% 97.0%
5024218 206.1.3.23 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › RNA_ligase 0.70 65.0 5.41e-01 100.0% 81.9%
5077223 206.1.3.23 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › RNA_ligase 0.69 65.0 5.04e-01 100.0% 73.1%
3594981 206.1.3.23 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › RNA_ligase 0.69 64.0 5.49e-01 100.0% 87.5%
4160069 206.1.3.0 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp 0.65 58.0 4.90e-01 96.3% 74.5%
5036153 206.1.3.1 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › DNA_ligase_A_M 0.63 56.0 5.56e-01 94.7% 99.5%
3605538 206.1.3.1 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › DNA_ligase_A_M 0.61 56.0 4.97e-01 97.9% 89.1%
4947307 206.1.3.1 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › DNA_ligase_A_M 0.61 56.0 4.59e-01 97.9% 60.9%
4325132 4095.1.1.2 ↗ alpha bundles › ATP-dependent DNA ligase DNA-binding domain › ATP-dependent DNA ligase DNA-binding domain › ATP-dependent DNA ligase DNA-binding domain › DNA_ligase_A_M+DNA_ligase_A_N 0.61 56.0 4.57e-01 97.3% 63.0%
4937749 206.1.3.1 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › DNA_ligase_A_M 0.61 55.0 4.50e-01 95.7% 60.6%
4399570 206.1.3.1 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › DNA_ligase_A_M 0.61 54.0 5.10e-01 94.7% 96.4%
5042001 206.1.3.1 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › DNA_ligase_A_M 0.61 55.0 4.51e-01 96.3% 61.5%
4951306 206.1.3.1 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › DNA_ligase_A_M 0.59 53.0 4.09e-01 95.7% 46.0%
3387834 206.1.3.1 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › DNA_ligase_A_M 0.59 53.0 5.37e-01 95.2% 97.8%
4680450 206.1.3.1 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › DNA_ligase_A_M 0.59 52.0 4.97e-01 94.1% 96.3%
5076593 206.1.3.1 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › DNA_ligase_A_M 0.58 53.0 5.31e-01 96.3% 98.4%
4914243 206.1.3.116 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › DNA_ligase_A_M, DNA_ligase_A_C 0.58 46.0 4.47e-01 81.9% 87.3%
3703188 206.1.3.0 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp 0.58 53.0 4.94e-01 99.5% 81.3%
4311607 4272.1.1.1 ↗ a+b two layers › Nqo5-like › Nqo5-like › Nqo5-like › Complex1_30kDa 0.58 24.0 2.81e-01 96.8% 51.4%
3593973 206.1.3.0 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp 0.58 52.0 4.42e-01 95.7% 69.8%
3495502 206.1.3.4 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › mRNA_cap_enzyme 0.57 51.0 4.43e-01 95.2% 79.6%
4360726 206.1.3.0 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp 0.57 52.0 4.44e-01 97.9% 69.7%
4468440 55.1.1.1 ↗ beta barrels › Urease metallochperone UreE-N › Urease metallochperone UreE-N › Urease metallochperone UreE-N › UreE_N 0.55 18.0 2.71e-01 95.7% 66.7%
4411335 206.1.3.5 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › DNA_ligase_aden 0.54 48.0 4.15e-01 97.9% 67.0%
4545884 55.1.1.1 ↗ beta barrels › Urease metallochperone UreE-N › Urease metallochperone UreE-N › Urease metallochperone UreE-N › UreE_N 0.53 19.0 2.97e-01 96.3% 81.4%
3326493 211.1.1.1 ↗ a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase 0.51 24.0 3.27e-01 97.9% 88.9%
D2 high residues 273-389
PDB
Domain cluster: rep: hypothetical_protein_D1R32_gp108__YP_009506870__Tunisvirus_fontaine2__1421067__D281-403
D3 medium residues 6-78
PDB