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hypothetical_protein_MIV055R
Euk-VirInvertebrate_iridescent_virus_3
hypothetical_protein_MIV055R__YP_654627__Invertebrate_iridescent_virus_3__345201
Identity
- Accession:
- YP_654627 ↗
- Protein ID:
- hypothetical_protein_MIV055R
- Kingdom:
- euk
Quality
75.5
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Megaviricetes›
Pimascovirales›
Iridoviridae›
Chloriridovirus›
Invertebrate_iridescent_virus_3
TaxID: 345201
Cluster
View cluster (3 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-63
Domain cluster:
representative
CATH (21)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7kypB01 | 1.10.3470.10 | Mainly Alpha › Orthogonal Bundle › ABC transporter involved in vitamin B12 uptake, BtuC › ABC transporter involved in vitamin B12 uptake, BtuC | 0.67 | 56.0 | 3.74e-01 | 100.0% | 81.9% |
| 5grqA00 | 1.10.8.810 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Daxx helical bundle domain | 0.64 | 53.0 | 4.81e-01 | 100.0% | 81.1% |
| 2yi9A05 | 1.20.1270.270 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › VP1, C-terminal extension domain | 0.63 | 45.0 | 4.23e-01 | 83.6% | 61.0% |
| 3letA00 | 1.10.3290.10 | Mainly Alpha › Orthogonal Bundle › Fic-like fold › Fido-like domain | 0.63 | 51.0 | 3.28e-01 | 90.2% | 19.9% |
| 3iylB02 | 1.10.2050.10 | Mainly Alpha › Orthogonal Bundle › Protein mu-1, chain B, domain 3 › Protein mu-1, chain B, domain 3 | 0.63 | 46.0 | 3.65e-01 | 80.3% | 71.6% |
| 2zopA00 | 1.10.520.30 | Mainly Alpha › Orthogonal Bundle › Peroxidase; domain 1 › AF1862-like domain | 0.62 | 44.0 | 3.67e-01 | 77.0% | 60.7% |
| 3f5cB00 | 1.10.565.10 | Mainly Alpha › Orthogonal Bundle › Retinoid X Receptor › Retinoid X Receptor | 0.59 | 47.0 | 3.46e-01 | 91.8% | 48.1% |
| 2g8lB01 | 1.10.8.380 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Uncharacterised protein PF01937, DUF89, domain 1 | 0.59 | 46.0 | 4.54e-01 | 88.5% | 83.6% |
| 3h3aA04 | 1.10.246.80 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › | 0.59 | 43.0 | 4.69e-01 | 98.4% | 98.0% |
| 3hx3A01 | 1.10.8.20 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › N-terminal domain of phosphatidylinositol transfer protein sec14p | 0.59 | 46.0 | 4.55e-01 | 90.2% | 82.1% |
| 2e52B01 | 3.40.91.70 | Alpha Beta › 3-Layer(aba) Sandwich › Restriction Endonuclease › Type II restriction endonuclease, HindIII | 0.58 | 47.0 | 3.36e-01 | 100.0% | 64.7% |
| 4m70B00 | 1.10.246.200 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › WPP domain | 0.57 | 46.0 | 4.13e-01 | 91.8% | 81.3% |
| 7w5lA01 | 3.40.605.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 | 0.57 | 41.0 | 2.76e-01 | 77.0% | 60.2% |
| 3djaA01 | 1.20.920.70 | Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › | 0.57 | 44.0 | 3.44e-01 | 86.9% | 42.1% |
| 4nqwA01 | 1.10.1740.10 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif | 0.57 | 45.0 | 4.12e-01 | 88.5% | 69.0% |
| 1w5dA01 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.56 | 48.0 | 3.26e-01 | 100.0% | 33.2% |
| 5dicA00 | 1.10.238.20 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › Pheromone/general odorant binding protein domain | 0.56 | 40.0 | 3.32e-01 | 96.7% | 40.9% |
| 2zxqA06 | 1.20.1270.70 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Designed single chain three-helix bundle | 0.55 | 42.0 | 4.15e-01 | 86.9% | 80.3% |
| 1kyoF00 | 1.10.287.20 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Ubiquinol-cytochrome C reductase hinge domain | 0.53 | 36.0 | 3.44e-01 | 70.5% | 81.1% |
| 3b9qA01 | 1.20.120.140 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › SRP54, nucleotide-binding domain | 0.53 | 42.0 | 3.84e-01 | 100.0% | 64.0% |
| 4j8sA00 | 1.25.40.840 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › CCR4-NOT transcription complex subunit 1 TTP binding domain | 0.52 | 41.0 | 3.02e-01 | 91.8% | 30.0% |
ECOD (18)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4243821 | 3317.1.1.0 ↗ | alpha arrays › KorB C-terminal domain-like › KorB C-terminal domain › KorB C-terminal domain | 0.70 | 55.0 | 5.33e-01 | 100.0% | 78.6% |
| 3654648 | 103.9.1.0 ↗ | alpha arrays › RuvA-C › RanGAP2 N-terminal domain › RanGAP2 N-terminal domain | 0.66 | 47.0 | 4.58e-01 | 77.0% | 91.4% |
| 2133274 | 611.10.1.1 ↗ | alpha bundles › N-cbl like › DAXX helical bundle domain › DAXX helical bundle domain › Daxx | 0.64 | 53.0 | 4.91e-01 | 100.0% | 84.9% |
| 4938179 | 103.5.1.0 ↗ | alpha arrays › RuvA-C › post-HMGL domain-like › post-HMGL domain-like | 0.61 | 43.0 | 4.27e-01 | 90.2% | 69.2% |
| 3995291 | 103.1.1.0 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain | 0.60 | 46.0 | 4.58e-01 | 93.4% | 78.5% |
| 3188602 | 865.1.1.0 ↗ | beta complex topology › PheT/TilS domain › PheT/TilS domain › PheT/TilS domain | 0.60 | 45.0 | 3.54e-01 | 82.0% | 51.1% |
| 4032498 | 102.1.1.138 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_RecD2 | 0.60 | 48.0 | 4.87e-01 | 90.2% | 90.0% |
| 3199419 | 148.1.3.179 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_BCS1 | 0.59 | 49.0 | 5.00e-01 | 100.0% | 100.0% |
| 3551458 | 103.1.1.3 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › CRAL_TRIO_N | 0.59 | 47.0 | 4.39e-01 | 90.2% | 71.2% |
| 4303377 | 103.1.1.6 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › RuvA_C | 0.57 | 41.0 | 4.32e-01 | 95.1% | 95.9% |
| 3491685 | 639.1.1.0 ↗ | alpha arrays › HHA-like › Hemolysin expression modulating protein HHA › Hemolysin expression modulating protein HHA | 0.57 | 37.0 | 3.79e-01 | 86.9% | 70.0% |
| 3610952 | 171.1.1.0 ↗ | alpha arrays › RNase III catalytic domain-like › RNase III catalytic domain-like › RNase III catalytic domain-like | 0.56 | 45.0 | 3.72e-01 | 95.1% | 71.2% |
| 4266826 | 632.22.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats | 0.55 | 46.0 | 3.82e-01 | 100.0% | 95.2% |
| 3607282 | 375.1.9.30 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Zinc-nucleated domain of serine integrase › DUF7623 | 0.55 | 46.0 | 4.28e-01 | 98.4% | 86.3% |
| 3538105 | 4207.1.1.123 ↗ | alpha duplicates or obligate multimers › Mediator hinge subcomplex-like › Mediator hinge subcomplex-like › RNA polymerase II holoenzyme component SRB7 (MED21) › TEX13 | 0.53 | 40.0 | 3.13e-01 | 86.9% | 51.3% |
| 3398320 | 632.7.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain | 0.53 | 40.0 | 3.90e-01 | 85.2% | 82.9% |
| 4435347 | 6035.1.1.2 ↗ | alpha bundles › Primase helical domain › Primase helical domain › Primase helical domain › RepB_primase_C | 0.52 | 40.0 | 3.40e-01 | 80.3% | 88.0% |
| 170038 | 132.2.1.1 ↗ | alpha bundles › ACP-like › Colicin E immunity proteins › Colicin E immunity proteins › Colicin_Pyocin | 0.51 | 40.0 | 3.54e-01 | 88.5% | 67.7% |
D2
high
residues 87-136
Domain cluster:
rep: putative_transcription_elongation_factor_S-II-related_protein__YP_009507517__Heterosigma_akashiwo_virus_01__97195__D153-194
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01096.24 best | Zn_ribbon_TFIIS | 57.3 | 1.50e-15 | 78.0% | 97.4% |