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hypothetical_protein_MIV060L

Euk-Vir

Invertebrate_iridescent_virus_3

hypothetical_protein_MIV060L__YP_654632__Invertebrate_iridescent_virus_3__345201

Identity

Accession:
YP_654632 ↗
Protein ID:
hypothetical_protein_MIV060L
Kingdom:
euk

Quality

77.8 mean pLDDT

Taxonomy

Bamfordvirae› Nucleocytoviricota› Megaviricetes› Pimascovirales› Iridoviridae› Chloriridovirus› Invertebrate_iridescent_virus_3

TaxID: 345201

Cluster

View cluster (140 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 18-136
PDB
Domain cluster: rep: IMGVR_UViG_3300033990_000272-3300033990-Ga0373184_0008483_4516_5451__D198-306
CATH (30)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1rwzA00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.88 78.0 5.93e-01 99.2% 44.7%
3ifvC00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.88 75.0 5.75e-01 98.3% 44.2%
1ge8A00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.87 79.0 6.07e-01 99.2% 47.5%
3p91A00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.86 80.0 6.09e-01 100.0% 46.9%
2ix2B00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.86 78.0 5.92e-01 98.3% 45.7%
1ud9A00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.85 77.0 5.89e-01 98.3% 46.3%
1u7bA00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.85 80.0 6.05e-01 99.2% 46.6%
1plqA00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.84 79.0 5.94e-01 99.2% 45.3%
6j8yA00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.83 78.0 5.87e-01 98.3% 46.7%
1sxjH01 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.83 76.0 7.53e-01 97.5% 92.7%
6j8yC00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.82 78.0 5.87e-01 100.0% 46.3%
3a1jB00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.81 77.0 5.72e-01 100.0% 49.1%
2ix2A01 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.80 71.0 5.62e-01 98.3% 50.2%
1vpkA01 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.79 68.0 6.86e-01 99.2% 90.8%
3t0pA02 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.78 67.0 5.63e-01 100.0% 56.5%
1sxjH02 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.78 73.0 7.15e-01 100.0% 93.0%
1t6lA00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.78 72.0 5.50e-01 100.0% 47.0%
5wceA03 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.76 67.0 6.71e-01 100.0% 93.3%
1vpkA03 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.76 67.0 6.71e-01 100.0% 93.3%
8dqwG01 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.76 71.0 6.14e-01 100.0% 94.9%
2avtA02 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.76 68.0 5.65e-01 100.0% 57.3%
1b77A00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.75 64.0 5.11e-01 100.0% 47.4%
2z0lA00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.75 68.0 5.06e-01 100.0% 47.7%
5w7zA01 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.74 63.0 6.47e-01 98.3% 94.7%
5aguA03 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.71 65.0 6.38e-01 100.0% 92.9%
3hslX00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.69 63.0 4.72e-01 100.0% 45.3%
4hbrA00 3.10.450.360 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.61 33.0 3.10e-01 100.0% 44.3%
1p9rA01 3.30.450.90 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.54 39.0 4.01e-01 93.3% 79.3%
3cjeA00 3.30.300.20 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain 0.53 38.0 3.55e-01 74.8% 86.0%
2x5cA01 3.30.70.3590 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.52 28.0 3.13e-01 87.4% 65.9%
ECOD (95)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4178829 227.1.1.1 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.90 81.0 8.00e-01 100.0% 89.6%
4995027 227.1.1.1 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.89 79.0 7.79e-01 100.0% 88.0%
4937819 227.1.1.1 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.89 82.0 8.05e-01 99.2% 91.2%
143269 227.1.1.1 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.88 80.0 7.89e-01 98.3% 89.6%
5990 227.1.1.1 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.88 78.0 7.74e-01 99.2% 89.3%
4987602 227.1.1.1 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.88 81.0 7.95e-01 98.3% 90.4%
4057537 227.1.1.1 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.88 80.0 7.86e-01 100.0% 89.6%
4599875 227.1.1.1 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.88 77.0 7.69e-01 99.2% 90.0%
4941928 227.1.1.1 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.88 80.0 8.06e-01 100.0% 94.2%
4936049 227.1.1.1 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.88 77.0 7.73e-01 99.2% 90.8%
4059128 227.1.1.1 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.88 77.0 7.71e-01 99.2% 90.8%
5056757 227.1.1.1 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.87 80.0 7.86e-01 100.0% 90.4%
5037344 227.1.1.1 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.87 80.0 7.99e-01 98.3% 94.2%
5044014 227.1.1.1 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.87 79.0 8.05e-01 99.2% 97.4%
4943404 227.1.1.0 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.87 83.0 8.01e-01 100.0% 90.8%
4939065 227.1.1.1 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.87 76.0 7.65e-01 99.2% 90.8%
5047575 227.1.1.1 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.87 80.0 7.87e-01 99.2% 91.2%
4142781 227.1.1.1 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.87 80.0 7.86e-01 100.0% 91.2%
162047 227.1.1.1 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.87 80.0 7.80e-01 100.0% 89.8%
5023031 227.1.1.1 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.87 81.0 7.99e-01 100.0% 92.8%
5043506 227.1.1.1 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.87 78.0 7.69e-01 99.2% 89.6%
4302174 227.1.1.1 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.86 78.0 7.67e-01 99.2% 89.6%
5078494 227.1.1.1 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.86 78.0 7.71e-01 99.2% 90.4%
4980359 227.1.1.1 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.86 75.0 7.53e-01 99.2% 90.8%
4172290 227.1.1.1 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.86 81.0 7.84e-01 99.2% 90.0%
2442100 227.1.1.1 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.86 81.0 7.72e-01 100.0% 86.8%
5027066 227.1.1.1 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.85 77.0 7.62e-01 100.0% 90.4%
4625643 227.1.1.4 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 0.85 74.0 7.46e-01 100.0% 90.8%
4956739 227.1.1.1 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.85 78.0 7.65e-01 100.0% 91.2%
5052550 227.1.1.1 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.85 80.0 7.89e-01 100.0% 94.4%
3503503 227.1.1.12 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 0.85 79.0 7.32e-01 98.3% 93.1%
4983063 227.1.1.1 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.84 77.0 7.59e-01 99.2% 91.2%
1822927 227.1.1.2 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.84 79.0 7.00e-01 99.2% 71.8%
5070586 227.1.1.1 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.84 77.0 7.56e-01 100.0% 91.2%
3407531 227.1.1.4 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 0.84 80.0 7.63e-01 100.0% 87.4%
3624709 227.1.1.4 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 0.84 79.0 7.65e-01 100.0% 90.0%
3230926 227.1.1.4 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 0.84 79.0 7.64e-01 100.0% 90.0%
3789624 227.1.1.0 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.84 80.0 7.49e-01 100.0% 90.7%
4024730 227.1.1.0 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.84 58.0 6.84e-01 70.6% 100.0%
2392830 227.1.1.1 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.84 77.0 7.47e-01 100.0% 87.8%
4043935 227.1.1.1 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.84 80.0 7.71e-01 100.0% 93.1%
4026073 227.1.1.1 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.84 79.0 7.78e-01 99.2% 97.6%
4934001 227.1.1.1 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.83 79.0 7.83e-01 100.0% 95.2%
3788095 227.1.1.4 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 0.83 80.0 7.58e-01 100.0% 90.4%
5056758 227.1.1.6 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.83 73.0 7.47e-01 100.0% 96.5%
4870150 227.1.1.1 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.82 77.0 7.37e-01 99.2% 87.3%
3520418 227.1.1.1 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.82 78.0 7.09e-01 99.2% 90.7%
2834340 227.1.1.4 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 0.82 78.0 7.36e-01 100.0% 89.9%
4619259 227.1.1.4 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 0.82 78.0 7.21e-01 100.0% 83.4%
5033948 227.1.1.6 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.82 74.0 7.21e-01 100.0% 87.7%
3932752 227.1.1.0 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.82 75.0 7.43e-01 100.0% 92.8%
3256387 227.1.1.4 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 0.82 77.0 6.98e-01 100.0% 94.2%
5052551 227.1.1.6 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.82 74.0 7.31e-01 100.0% 91.2%
3478975 227.1.1.0 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.81 77.0 7.34e-01 99.2% 88.1%
4456195 227.1.1.0 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.81 74.0 7.43e-01 100.0% 95.0%
3936915 227.1.1.0 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.81 77.0 7.44e-01 100.0% 93.1%
3387590 227.1.1.8 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_3 0.81 68.0 6.94e-01 100.0% 91.3%
3346536 227.1.1.4 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 0.81 77.0 7.12e-01 100.0% 86.9%
3351110 227.1.1.1 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.81 77.0 7.68e-01 100.0% 99.2%
3210421 227.1.1.4 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 0.81 77.0 6.94e-01 100.0% 88.4%
3728061 227.1.1.4 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 0.81 76.0 7.28e-01 100.0% 88.0%
3743202 227.1.1.4 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 0.81 74.0 7.46e-01 99.2% 95.8%
4948360 227.1.1.6 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.80 72.0 6.99e-01 98.3% 86.8%
4998585 227.1.1.6 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.80 72.0 7.18e-01 100.0% 93.3%
5011281 227.1.1.6 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.80 73.0 7.18e-01 100.0% 91.2%
3193266 227.1.1.11 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › Hus1 0.80 75.0 7.00e-01 100.0% 91.0%
5010672 227.1.1.0 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.80 73.0 7.33e-01 100.0% 95.8%
5051689 227.1.1.6 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.80 74.0 7.25e-01 100.0% 92.8%
4660283 227.1.1.6 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.80 74.0 7.29e-01 100.0% 93.6%
143267 227.1.1.1 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.80 73.0 7.17e-01 99.2% 91.3%
3624708 227.1.1.4 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 0.79 75.0 7.18e-01 100.0% 88.1%
309454 227.1.1.0 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.79 73.0 7.04e-01 100.0% 87.9%
5060716 227.1.1.0 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.79 75.0 7.25e-01 100.0% 92.3%
5039027 227.1.1.0 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.79 71.0 7.12e-01 100.0% 94.2%
4437554 227.1.1.8 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_3 0.79 71.0 6.99e-01 100.0% 90.4%
3782606 227.1.1.4 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 0.79 74.0 6.90e-01 100.0% 86.9%
4026069 227.1.1.6 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.78 74.0 7.08e-01 100.0% 89.6%
2805173 227.1.1.6 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.78 71.0 6.99e-01 100.0% 91.2%
3251045 227.1.1.6 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.78 73.0 6.63e-01 100.0% 76.6%
2392831 227.1.1.6 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.78 72.0 7.02e-01 100.0% 91.3%
4212381 227.1.1.6 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.78 73.0 6.96e-01 100.0% 87.4%
3810053 227.1.1.0 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.78 74.0 6.65e-01 100.0% 93.5%
4956740 227.1.1.6 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.77 71.0 7.03e-01 100.0% 93.6%
4542774 227.1.1.8 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_3 0.77 68.0 6.87e-01 100.0% 94.2%
4360456 227.1.1.8 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_3 0.76 69.0 6.66e-01 100.0% 87.7%
2096126 227.1.1.8 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_3 0.76 67.0 6.64e-01 100.0% 91.0%
5979 227.1.1.8 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_3 0.76 67.0 6.62e-01 100.0% 90.2%
4500973 227.1.1.8 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_3 0.76 68.0 6.72e-01 100.0% 91.9%
4995028 227.1.1.6 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.76 71.0 6.99e-01 100.0% 95.2%
4995744 227.1.1.0 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.72 62.0 6.19e-01 100.0% 89.4%
3962048 227.1.1.15 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › PF26035 0.71 52.0 5.63e-01 100.0% 91.0%
5039219 227.1.1.0 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.70 64.0 6.31e-01 100.0% 92.8%
4383522 2004.1.1.42 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › T2SSE 0.53 42.0 2.88e-01 95.0% 23.9%
3989004 2004.1.1.42 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › T2SSE 0.52 38.0 2.85e-01 89.1% 29.7%
3903928 10.1.1.17 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 0.51 38.0 3.24e-01 100.0% 48.2%
D2 high residues 156-283
PDB
Domain cluster: rep: proliferating_cell_nuclear_antigen__YP_009021207__Anopheles_minimus_iridovirus__1465751__D85-202