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hypothetical_protein_MIV069L

Euk-Vir

Invertebrate_iridescent_virus_3

hypothetical_protein_MIV069L__YP_654641__Invertebrate_iridescent_virus_3__345201

Identity

Accession:
YP_654641 ↗
Protein ID:
hypothetical_protein_MIV069L
Kingdom:
euk

Quality

70.3 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 206-271
PDB
CATH (64)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3mcaA01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.80 73.0 5.94e-01 100.0% 71.2%
2yweA02 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.78 71.0 6.13e-01 100.0% 88.0%
3gqbA01 2.40.30.20 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.76 68.0 6.67e-01 100.0% 94.4%
6oqrA01 2.40.30.20 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.76 68.0 6.12e-01 100.0% 74.4%
1vw3C01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.75 67.0 5.34e-01 100.0% 67.9%
2nv4A00 2.40.30.70 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › YaeB-like 0.75 65.0 5.16e-01 95.5% 90.9%
4g6iC02 2.40.30.20 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.75 67.0 5.97e-01 100.0% 87.2%
3w1eA03 2.40.10.410 Mainly Beta › Beta Barrel › Thrombin, subunit H › FlgT, C-terminal domain 0.75 65.0 5.92e-01 98.5% 96.6%
3qtgA02 2.40.33.10 Mainly Beta › Beta Barrel › M1 Pyruvate Kinase; Domain 3 › PK beta-barrel domain-like 0.75 66.0 5.89e-01 100.0% 92.6%
2v31A01 2.40.30.180 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Ubiquitin-activating enzyme E1, FCCH domain 0.74 66.0 5.79e-01 100.0% 81.4%
7oo1A01 2.40.33.10 Mainly Beta › Beta Barrel › M1 Pyruvate Kinase; Domain 3 › PK beta-barrel domain-like 0.74 58.0 5.49e-01 83.3% 96.1%
1kzlA02 2.40.30.20 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.74 65.0 5.69e-01 100.0% 83.2%
4g6iB01 2.40.30.20 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.74 65.0 5.93e-01 100.0% 92.1%
3gg8C03 2.40.33.10 Mainly Beta › Beta Barrel › M1 Pyruvate Kinase; Domain 3 › PK beta-barrel domain-like 0.73 65.0 5.71e-01 98.5% 93.8%
4zgnB00 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.72 58.0 5.01e-01 87.9% 75.7%
8eq1A01 2.40.33.10 Mainly Beta › Beta Barrel › M1 Pyruvate Kinase; Domain 3 › PK beta-barrel domain-like 0.72 61.0 5.57e-01 93.9% 100.0%
3t05A02 2.40.33.10 Mainly Beta › Beta Barrel › M1 Pyruvate Kinase; Domain 3 › PK beta-barrel domain-like 0.72 63.0 5.58e-01 98.5% 93.8%
6su1D01 2.40.33.10 Mainly Beta › Beta Barrel › M1 Pyruvate Kinase; Domain 3 › PK beta-barrel domain-like 0.71 61.0 5.51e-01 93.9% 100.0%
7r6yA01 2.40.33.10 Mainly Beta › Beta Barrel › M1 Pyruvate Kinase; Domain 3 › PK beta-barrel domain-like 0.70 60.0 5.38e-01 93.9% 100.0%
3kw2A01 2.40.240.20 Mainly Beta › Beta Barrel › Ribosomal Protein L25; Chain P › Hypothetical PUA domain-like; domain 1 0.70 53.0 5.28e-01 81.8% 92.6%
1a3wB03 2.40.33.10 Mainly Beta › Beta Barrel › M1 Pyruvate Kinase; Domain 3 › PK beta-barrel domain-like 0.70 60.0 5.37e-01 100.0% 92.8%
3okxB00 2.40.30.70 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › YaeB-like 0.69 61.0 4.73e-01 100.0% 80.5%
4lusB01 2.40.37.10 Mainly Beta › Beta Barrel › Lyase, Ornithine Decarboxylase; Chain A, domain 1 › Lyase, Ornithine Decarboxylase; Chain A, domain 1 0.69 61.0 4.71e-01 100.0% 62.4%
2greF02 2.40.30.40 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Peptidase M42, domain 2 0.69 60.0 5.69e-01 98.5% 100.0%
2j5uA02 2.40.10.340 Mainly Beta › Beta Barrel › Thrombin, subunit H › Rod shape-determining protein MreC, domain 1 0.69 60.0 5.57e-01 100.0% 91.7%
4ac9C04 2.40.10.190 Mainly Beta › Beta Barrel › Thrombin, subunit H › translation elongation factor selb, chain A, domain 4 0.69 60.0 5.67e-01 100.0% 88.7%
1kjzA03 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.68 54.0 4.86e-01 87.9% 79.3%
5ycqA00 2.30.30.390 Mainly Beta › Roll › SH3 type barrels. › Hemimethylated DNA-binding domain 0.67 47.0 4.44e-01 72.7% 72.7%
4n0rA03 2.60.40.3950 Mainly Beta › Sandwich › Immunoglobulin-like › 0.64 56.0 4.77e-01 100.0% 79.1%
3v76A02 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.64 50.0 4.63e-01 89.4% 74.4%
3gidB02 3.30.1490.20 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain 0.64 51.0 4.75e-01 100.0% 69.9%
4v15A01 2.40.37.20 Mainly Beta › Beta Barrel › Lyase, Ornithine Decarboxylase; Chain A, domain 1 › D-serine dehydratase-like domain 0.63 54.0 4.30e-01 100.0% 47.9%
5z0uA03 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.63 53.0 4.79e-01 98.5% 67.8%
2aaaA02 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.61 52.0 4.52e-01 100.0% 61.8%
2ra1A04 2.60.40.1220 Mainly Beta › Sandwich › Immunoglobulin-like › 0.60 50.0 4.53e-01 98.5% 76.3%
2wanA01 2.60.40.1130 Mainly Beta › Sandwich › Immunoglobulin-like › Rab geranylgeranyltransferase alpha-subunit, insert domain 0.60 50.0 4.57e-01 100.0% 83.2%
1r8nA00 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.60 44.0 3.26e-01 78.8% 94.1%
2zxdA02 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.60 50.0 4.59e-01 100.0% 71.4%
3vm7A02 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.59 50.0 4.39e-01 100.0% 64.3%
7m0rA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.59 49.0 4.66e-01 95.5% 84.6%
3fb9B00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.58 48.0 4.50e-01 92.4% 84.5%
4e2oA02 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.58 47.0 4.29e-01 100.0% 67.0%
2g3mA04 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.58 46.0 4.21e-01 100.0% 65.2%
1lmiA00 2.60.40.1240 Mainly Beta › Sandwich › Immunoglobulin-like › 0.58 49.0 4.03e-01 100.0% 89.3%
1y96D00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.58 42.0 3.94e-01 78.8% 78.3%
2it1A03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.57 39.0 4.07e-01 100.0% 78.7%
4j27A02 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.57 48.0 4.41e-01 100.0% 73.0%
3lnnA01 2.40.420.20 Mainly Beta › Beta Barrel › conserved putative lor/sdh protein from methanococcus maripaludis s2 fold › 0.57 45.0 4.16e-01 90.9% 80.2%
3zn6A02 2.60.40.3410 Mainly Beta › Sandwich › Immunoglobulin-like › 0.56 47.0 4.39e-01 100.0% 96.6%
7v4mB01 2.60.120.330 Mainly Beta › Sandwich › Jelly Rolls › B-lactam Antibiotic, Isopenicillin N Synthase; Chain 0.56 41.0 3.08e-01 100.0% 31.1%
4f7uG00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.56 38.0 3.85e-01 72.7% 95.6%
1lnzA01 2.70.210.12 Mainly Beta › Distorted Sandwich › Spo0b-associated Gtp-binding Protein; Chain: A, › GTP1/OBG domain 0.55 50.0 3.76e-01 100.0% 95.5%
3v0dA02 2.60.40.1110 Mainly Beta › Sandwich › Immunoglobulin-like › 0.54 43.0 3.44e-01 90.9% 51.0%
4fxtA01 2.60.40.1120 Mainly Beta › Sandwich › Immunoglobulin-like › Carboxypeptidase-like, regulatory domain 0.54 41.0 3.83e-01 89.4% 65.1%
2bseA00 2.60.40.1830 Mainly Beta › Sandwich › Immunoglobulin-like › Phage tail base-plate Siphoviridae RBP, head domain 0.53 43.0 3.85e-01 100.0% 68.2%
6phxA03 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.53 46.0 4.15e-01 100.0% 72.6%
3zssA04 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.53 46.0 4.19e-01 100.0% 75.6%
3fqmA01 2.20.25.210 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › Hepatitis C NS5A, domain 1B 0.53 38.0 3.97e-01 95.5% 88.5%
5cyxA03 2.60.40.60 Mainly Beta › Sandwich › Immunoglobulin-like › Cadherins 0.53 43.0 3.79e-01 97.0% 69.7%
1wfjA01 2.60.40.150 Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain 0.53 41.0 3.42e-01 87.9% 54.0%
4jx0A02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.52 43.0 3.50e-01 100.0% 54.5%
3mmlE02 2.40.100.10 Mainly Beta › Beta Barrel › Cyclophilin › Cyclophilin-like 0.52 43.0 3.68e-01 100.0% 75.0%
1a9xB02 3.40.50.880 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Class I glutamine amidotransferase (GATase) domain 0.52 36.0 2.58e-01 74.2% 46.5%
4oumA00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.50 41.0 3.45e-01 100.0% 92.4%
ECOD (97)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3964292 1.1.13.38 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_BR0599 0.87 80.0 6.65e-01 100.0% 65.5%
1954233 11.21.1.1 beta sandwiches › Immunoglobulin-like beta-sandwich › Ig-like domain in tailspike protein › Ig-like domain in tailspike protein › TSP_Ig-like 0.86 79.0 7.05e-01 100.0% 96.6%
3973332 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.85 78.0 7.44e-01 100.0% 90.7%
1714452 11.21.1.1 beta sandwiches › Immunoglobulin-like beta-sandwich › Ig-like domain in tailspike protein › Ig-like domain in tailspike protein › TSP_Ig-like 0.84 77.0 6.98e-01 100.0% 95.4%
3782195 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.83 76.0 6.94e-01 100.0% 92.9%
3513769 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.83 76.0 7.24e-01 100.0% 93.3%
3739976 7558.1.1.0 a/b three-layered sandwiches › Glycerol-3-phosphate (1)-acyltransferase › Glycerol-3-phosphate (1)-acyltransferase › Glycerol-3-phosphate (1)-acyltransferase 0.82 75.0 6.87e-01 100.0% 92.9%
3177070 7558.1.1.0 a/b three-layered sandwiches › Glycerol-3-phosphate (1)-acyltransferase › Glycerol-3-phosphate (1)-acyltransferase › Glycerol-3-phosphate (1)-acyltransferase 0.82 75.0 7.03e-01 100.0% 98.8%
3969204 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.82 76.0 7.26e-01 100.0% 94.7%
3781314 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.82 75.0 6.73e-01 100.0% 92.2%
4217174 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.82 75.0 7.41e-01 100.0% 94.3%
3172227 7558.1.1.0 a/b three-layered sandwiches › Glycerol-3-phosphate (1)-acyltransferase › Glycerol-3-phosphate (1)-acyltransferase › Glycerol-3-phosphate (1)-acyltransferase 0.81 74.0 6.48e-01 100.0% 94.7%
5051090 1.1.7.17 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.81 74.0 6.89e-01 100.0% 87.5%
5012839 1.1.7.13 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › TrmO 0.78 68.0 5.28e-01 95.5% 81.4%
5078547 1.1.7.17 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.78 70.0 6.19e-01 100.0% 70.5%
4943228 1.1.7.146 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_Xtn 0.77 68.0 6.90e-01 97.0% 100.0%
140548 1.1.7.13 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › TrmO 0.77 67.0 5.05e-01 95.5% 75.0%
2448699 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.77 69.0 6.86e-01 98.5% 95.6%
4880433 1.1.7.17 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.77 62.0 6.16e-01 87.9% 82.9%
3973553 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.77 69.0 6.82e-01 100.0% 94.3%
4949065 1.1.7.13 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › TrmO 0.77 64.0 5.35e-01 92.4% 73.7%
3204011 1.1.7.17 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.77 69.0 6.21e-01 100.0% 76.7%
4994399 1.1.15.1 beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like › PK 0.77 68.0 6.00e-01 98.5% 93.7%
3332862 1.1.7.35 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › E1_FCCH 0.77 68.0 6.04e-01 100.0% 85.3%
3975132 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.76 69.0 6.20e-01 100.0% 73.3%
5080901 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.76 69.0 6.47e-01 100.0% 82.5%
4083044 1.1.7.17 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.76 67.0 6.49e-01 100.0% 94.7%
4407497 1.1.7.17 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.76 66.0 6.73e-01 97.0% 98.5%
3829837 1.1.15.0 beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like 0.76 66.0 5.51e-01 95.5% 95.5%
4338601 1.1.7.17 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.76 67.0 6.06e-01 100.0% 74.4%
4066146 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.75 65.0 5.68e-01 100.0% 66.7%
3310664 1.1.15.1 beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like › PK 0.75 68.0 5.97e-01 100.0% 93.7%
4958018 1.1.7.13 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › TrmO 0.75 64.0 5.01e-01 95.5% 84.3%
4984743 1.1.15.1 beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like › PK 0.75 65.0 5.78e-01 97.0% 92.6%
4949379 1.1.15.1 beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like › PK 0.75 67.0 5.83e-01 100.0% 90.0%
1516038 1.1.15.0 beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like 0.75 66.0 5.89e-01 100.0% 92.6%
5057245 1.1.15.0 beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like 0.74 65.0 5.89e-01 98.5% 91.1%
4954732 1.1.15.0 beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like 0.74 66.0 5.94e-01 98.5% 94.4%
4316004 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.74 67.0 6.14e-01 100.0% 80.0%
4379635 1.1.15.1 beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like › PK 0.74 66.0 5.87e-01 100.0% 94.7%
4235076 1.1.7.17 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.74 65.0 6.12e-01 100.0% 86.3%
4311355 1.1.15.1 beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like › PK 0.74 65.0 5.62e-01 97.0% 95.0%
4251719 1.1.15.0 beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like 0.74 65.0 5.80e-01 100.0% 94.7%
3332717 1.1.15.0 beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like 0.74 64.0 5.50e-01 97.0% 86.7%
4104961 1.1.15.1 beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like › PK 0.73 63.0 5.67e-01 95.5% 94.4%
3966502 1.1.15.1 beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like › PK 0.73 66.0 5.73e-01 100.0% 92.0%
4337888 1.1.15.1 beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like › PK 0.73 65.0 5.70e-01 100.0% 90.0%
4203356 1.1.15.1 beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like › PK 0.73 64.0 5.72e-01 98.5% 94.7%
4468653 1.1.15.1 beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like › PK 0.73 65.0 5.74e-01 98.5% 93.7%
4949140 1.1.7.13 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › TrmO 0.73 64.0 5.84e-01 97.0% 98.9%
3281973 1.1.15.1 beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like › PK 0.73 63.0 5.63e-01 98.5% 93.7%
3415703 1.1.15.1 beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like › PK 0.72 65.0 5.73e-01 100.0% 96.8%
4932128 1.1.15.0 beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like 0.72 63.0 5.80e-01 98.5% 96.5%
4192745 1.1.15.1 beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like › PK 0.72 64.0 5.64e-01 98.5% 94.7%
4972564 1.1.15.1 beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like › PK 0.72 62.0 5.57e-01 98.5% 92.6%
3590326 1.1.15.1 beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like › PK 0.72 64.0 5.45e-01 98.5% 95.2%
3644791 1.1.15.0 beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like 0.72 62.0 5.40e-01 95.5% 89.0%
4944119 1.1.15.1 beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like › PK 0.72 62.0 5.54e-01 97.0% 92.6%
5072694 1.1.15.1 beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like › PK 0.72 62.0 5.73e-01 98.5% 95.3%
4272870 1.1.15.1 beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like › PK 0.72 62.0 5.49e-01 97.0% 93.7%
3177101 1.1.15.1 beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like › PK 0.71 63.0 5.47e-01 98.5% 94.0%
3965822 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.71 62.0 5.62e-01 98.5% 96.7%
5001027 1.1.15.0 beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like 0.71 62.0 5.62e-01 97.0% 96.7%
3880866 1.1.15.1 beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like › PK 0.71 63.0 5.43e-01 100.0% 91.4%
1515984 1.1.15.1 beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like › PK 0.71 62.0 5.43e-01 98.5% 93.0%
3396811 1.1.15.0 beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like 0.71 63.0 5.51e-01 100.0% 94.0%
3596767 1.1.15.0 beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like 0.71 63.0 5.49e-01 100.0% 94.0%
5041126 1.1.15.0 beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like 0.71 61.0 5.50e-01 100.0% 93.7%
3313542 1.1.15.0 beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like 0.70 63.0 5.41e-01 100.0% 95.2%
3481480 1.1.15.1 beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like › PK 0.70 61.0 5.27e-01 95.5% 96.0%
5050004 1.1.15.1 beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like › PK 0.70 60.0 5.47e-01 98.5% 100.0%
3261422 1.1.15.1 beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like › PK 0.70 63.0 5.37e-01 100.0% 90.5%
5033714 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.70 61.0 5.65e-01 98.5% 100.0%
3386080 1.1.15.1 beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like › PK 0.70 61.0 5.39e-01 100.0% 94.0%
3987212 1.1.15.1 beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like › PK 0.70 62.0 5.31e-01 100.0% 93.3%
5008884 1.1.15.1 beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like › PK 0.68 59.0 5.44e-01 98.5% 92.9%
4009430 11.1.4.25 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › PapC_C 0.67 50.0 4.57e-01 87.9% 60.2%
5060624 11.1.4.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.67 51.0 4.97e-01 87.9% 73.3%
3273346 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.63 55.0 4.90e-01 98.5% 73.7%
3436022 4.1.1.175 beta barrels › SH3 › SH3 › SH3 › MSSS 0.62 46.0 5.02e-01 100.0% 94.5%
3675341 4.1.1.175 beta barrels › SH3 › SH3 › SH3 › MSSS 0.61 46.0 4.98e-01 100.0% 94.5%
2546598 12.1.1.14 beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › A_amylase_dom_C 0.59 50.0 4.79e-01 100.0% 82.9%
5048696 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.57 49.0 3.64e-01 98.5% 37.1%
1248302 12.1.1.0 beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain 0.57 47.0 4.26e-01 100.0% 66.3%
3754881 11.1.1.29 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TIG 0.56 47.0 4.33e-01 97.0% 83.3%
4631118 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.56 48.0 2.80e-01 97.0% 11.0%
5027525 11.1.4.23 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › CarboxypepD_reg 0.56 43.0 3.98e-01 89.4% 64.7%
4930861 4.1.1.13 beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.56 46.0 4.65e-01 92.4% 96.9%
3251002 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.55 47.0 4.30e-01 98.5% 84.4%
3266596 11.1.1.29 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TIG 0.55 47.0 4.27e-01 98.5% 84.4%
3276828 11.1.1.698 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_TgrO1 0.55 45.0 4.23e-01 98.5% 87.1%
5002954 4081.1.1.0 beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related 0.55 47.0 3.55e-01 100.0% 42.9%
5047975 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.53 45.0 4.11e-01 97.0% 78.9%
3561340 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.53 45.0 4.09e-01 100.0% 80.0%
3249571 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.52 43.0 3.95e-01 98.5% 75.8%
3648087 10.12.1.53 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › 2OG-FeII_Oxy_3 0.52 36.0 2.72e-01 78.8% 87.1%
3988650 3370.1.1.1 beta sandwiches › Lactococcin 972 › Lactococcin 972 › Lactococcin 972 › Lactococcin_972 0.51 41.0 3.96e-01 97.0% 78.7%
D2 medium residues 1-38_280-423
PDB
D3 medium residues 58-136
PDB
Domain cluster: representative
CATH (67)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2awnC02 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.76 43.0 4.42e-01 100.0% 57.7%
2zzeA03 2.40.30.130 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.73 61.0 5.72e-01 100.0% 74.5%
2ey4D00 2.40.10.230 Mainly Beta › Beta Barrel › Thrombin, subunit H › Probable tRNA pseudouridine synthase domain 0.72 60.0 6.18e-01 100.0% 97.3%
1k28D03 2.40.30.150 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Bacteriophage T4, Gp27, baseplate hub, domain 3 0.72 55.0 5.18e-01 82.3% 83.2%
1vq8S00 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.71 60.0 5.95e-01 91.1% 96.3%
5mmiU01 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.70 59.0 5.87e-01 92.4% 96.3%
2p5zX01 2.30.110.50 Mainly Beta › Roll › Pnp Oxidase; Chain A › 0.69 59.0 4.57e-01 92.4% 86.7%
1vwxf00 2.40.10.190 Mainly Beta › Beta Barrel › Thrombin, subunit H › translation elongation factor selb, chain A, domain 4 0.69 63.0 5.61e-01 100.0% 90.8%
2piaA01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.68 60.0 5.53e-01 100.0% 88.5%
6toaE01 2.40.10.270 Mainly Beta › Beta Barrel › Thrombin, subunit H › Bacteriophage SPP1 head-tail adaptor protein 0.67 48.0 4.48e-01 74.7% 72.4%
2e8yA01 2.60.40.2320 Mainly Beta › Sandwich › Immunoglobulin-like › 0.67 56.0 5.17e-01 98.7% 72.3%
2ra1A04 2.60.40.1220 Mainly Beta › Sandwich › Immunoglobulin-like › 0.67 57.0 5.40e-01 100.0% 78.4%
5tr9A01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.67 59.0 5.59e-01 100.0% 94.8%
2x8kA01 2.40.30.200 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.67 52.0 4.80e-01 86.1% 89.5%
2f1lA01 2.40.30.60 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › RimM 0.66 59.0 5.71e-01 100.0% 89.9%
1ywxA01 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.66 50.0 4.78e-01 81.0% 78.3%
3wdhA01 2.60.40.2320 Mainly Beta › Sandwich › Immunoglobulin-like › 0.66 56.0 5.27e-01 98.7% 77.1%
2e1bA02 3.30.980.10 Alpha Beta › 2-Layer Sandwich › Threonyl-tRNA Synthetase; Chain A, domain 2 › Threonyl-trna Synthetase; Chain A, domain 2 0.65 48.0 4.17e-01 79.7% 83.7%
3co8A01 2.40.37.10 Mainly Beta › Beta Barrel › Lyase, Ornithine Decarboxylase; Chain A, domain 1 › Lyase, Ornithine Decarboxylase; Chain A, domain 1 0.65 58.0 4.75e-01 100.0% 63.5%
5gxuB01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.63 56.0 4.86e-01 100.0% 92.6%
4w64B00 2.30.110.20 Mainly Beta › Roll › Pnp Oxidase; Chain A › Hcp1-like 0.63 50.0 4.06e-01 89.9% 75.6%
4pbdA00 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.62 53.0 4.94e-01 98.7% 90.2%
4labA00 3.30.2350.10 Alpha Beta › 2-Layer Sandwich › Pseudouridine synthase › Pseudouridine synthase 0.62 53.0 4.03e-01 94.9% 49.2%
2raqA01 3.30.70.1340 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › MTH889-like domain 0.62 47.0 4.67e-01 86.1% 77.6%
4pg4B03 3.30.70.3100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.61 44.0 4.50e-01 87.3% 80.0%
1blxA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.61 47.0 4.50e-01 82.3% 88.0%
2apoA03 3.30.70.3190 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.61 49.0 4.71e-01 88.6% 79.3%
2v9kA04 3.30.70.3190 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.61 48.0 4.35e-01 87.3% 85.3%
2cg9X01 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.60 51.0 4.76e-01 94.9% 96.0%
3dbaA00 3.30.450.40 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain 0.60 43.0 3.40e-01 75.9% 70.8%
1wh0A01 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.60 52.0 4.68e-01 98.7% 91.9%
2xcmC00 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.59 51.0 4.88e-01 96.2% 96.7%
2gysA03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.59 52.0 5.08e-01 100.0% 98.8%
2ausC02 3.30.2350.10 Alpha Beta › 2-Layer Sandwich › Pseudouridine synthase › Pseudouridine synthase 0.59 49.0 3.77e-01 93.7% 49.0%
3eniC00 2.50.10.10 Mainly Beta › Clam › Bacteriochlorophyll-a Protein › Bacteriochlorophyll A 0.59 48.0 3.15e-01 89.9% 39.0%
4bbyA05 3.30.300.330 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › 0.59 46.0 4.22e-01 86.1% 78.7%
1jj2L00 3.40.1120.10 Alpha Beta › 3-Layer(aba) Sandwich › Ribosomal protein L15e › Ribosomal protein L15 0.59 52.0 3.90e-01 97.5% 64.9%
1k8wA01 3.30.2350.10 Alpha Beta › 2-Layer Sandwich › Pseudouridine synthase › Pseudouridine synthase 0.58 48.0 3.51e-01 93.7% 59.3%
5w7tA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.57 42.0 3.92e-01 77.2% 74.2%
2nyiA01 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.57 43.0 4.33e-01 84.8% 80.2%
2pmzB07 2.40.50.150 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II, Rpb2 subunit, wall domain 0.57 40.0 3.55e-01 75.9% 93.5%
1sc6A03 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.57 43.0 4.28e-01 84.8% 79.3%
6bq9A02 3.30.1360.40 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › 0.56 49.0 4.70e-01 100.0% 84.0%
2ca9A02 3.30.70.1150 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT-like. Chain A, domain 2 0.56 43.0 4.21e-01 86.1% 75.3%
6s8zA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.56 41.0 4.56e-01 100.0% 100.0%
1q5yC00 3.30.70.1150 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT-like. Chain A, domain 2 0.55 42.0 4.24e-01 83.5% 81.7%
2d9qB01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 47.0 4.48e-01 98.7% 90.4%
3f3zA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.55 40.0 4.00e-01 78.5% 80.5%
1eerC01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 45.0 4.28e-01 98.7% 84.5%
1mruA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.54 41.0 3.98e-01 84.8% 80.4%
3gniB01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.53 41.0 3.99e-01 83.5% 83.1%
4bwpB01 1.10.510.10 Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 0.53 46.0 3.31e-01 98.7% 64.4%
1d5aA01 3.30.342.10 Alpha Beta › 2-Layer Sandwich › DNA Polymerase; Chain A, domain 1 › DNA Polymerase, chain B, domain 1 0.53 42.0 3.48e-01 88.6% 46.4%
4o4bB00 3.30.470.160 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › Inositol polyphosphate kinase 0.53 46.0 3.30e-01 100.0% 86.0%
6lbsB01 3.30.1370.230 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › Stn1, C-terminal wHTH domain 0.53 39.0 3.99e-01 81.0% 93.7%
1vioA03 3.30.70.1560 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Alpha-L RNA-binding motif 0.53 39.0 3.93e-01 88.6% 80.5%
2x7fC01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.53 40.0 3.84e-01 83.5% 77.7%
1dr9A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 44.0 4.18e-01 94.9% 83.2%
6fdyU01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.52 37.0 3.77e-01 75.9% 85.0%
1tdqA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 45.0 4.39e-01 100.0% 90.0%
1golA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.52 38.0 3.23e-01 77.2% 57.0%
2oznA00 2.60.40.680 Mainly Beta › Sandwich › Immunoglobulin-like › 0.51 41.0 3.57e-01 98.7% 54.1%
1kskA02 3.30.2350.10 Alpha Beta › 2-Layer Sandwich › Pseudouridine synthase › Pseudouridine synthase 0.51 42.0 3.42e-01 96.2% 53.3%
2ahoB03 3.30.70.1130 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › EIF_2_alpha 0.51 39.0 3.87e-01 86.1% 83.0%
3o4oC03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 43.0 3.94e-01 98.7% 89.1%
2onlC01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.51 38.0 3.78e-01 83.5% 76.7%
2zbbA02 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.50 36.0 3.67e-01 79.7% 86.4%
ECOD (93)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3966429 1.1.13.5 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_GPD 0.78 58.0 5.60e-01 79.7% 87.8%
3968713 1.1.13.5 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_GPD 0.75 58.0 5.58e-01 82.3% 85.6%
1779597 1.15.1.1 beta barrels › cradle loop barrel › Baseplate wedge protein gp7 domain V › Baseplate wedge protein gp7 domain V › Gp7_5th 0.75 57.0 5.24e-01 88.6% 63.4%
4976800 1.1.7.9 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › tRNA-synt_2c 0.74 64.0 6.15e-01 100.0% 83.3%
3970827 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.73 54.0 5.35e-01 79.7% 90.6%
4322439 1.1.7.9 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › tRNA-synt_2c 0.72 60.0 5.35e-01 98.7% 64.5%
4395103 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.72 66.0 6.31e-01 100.0% 88.9%
5036581 1.1.7.9 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › tRNA-synt_2c 0.72 60.0 5.56e-01 100.0% 72.0%
4942485 1.1.7.20 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Gar1 0.72 63.0 6.37e-01 98.7% 97.5%
4982501 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.72 64.0 6.02e-01 100.0% 94.7%
5041917 1.1.7.8 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Ribosomal_L35Ae 0.71 64.0 6.14e-01 100.0% 93.3%
4931041 1.1.7.9 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › tRNA-synt_2c 0.71 63.0 5.54e-01 100.0% 67.0%
4083333 1.1.7.11 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM 0.71 65.0 6.08e-01 100.0% 88.4%
4988964 1.1.8.0 beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain 0.71 58.0 5.71e-01 88.6% 83.5%
3216247 1.1.7.25 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › AARP2CN 0.70 61.0 5.90e-01 96.2% 93.3%
5074909 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.70 63.0 6.06e-01 98.7% 96.6%
4955533 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.70 62.0 5.63e-01 100.0% 73.3%
4405079 1.1.7.11 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM 0.70 63.0 5.91e-01 100.0% 84.2%
3277088 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.70 52.0 5.37e-01 78.5% 100.0%
4260597 1.1.7.11 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM 0.69 62.0 5.87e-01 100.0% 87.4%
4980136 1.1.7.8 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Ribosomal_L35Ae 0.69 62.0 5.97e-01 100.0% 95.5%
4208972 1.1.7.11 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM 0.69 62.0 5.75e-01 100.0% 85.0%
4085735 1.1.7.11 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM 0.68 61.0 5.86e-01 100.0% 90.0%
4587522 1.1.7.11 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM 0.68 60.0 5.71e-01 100.0% 88.4%
4144850 11.1.1.1257 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF29761 0.68 58.0 5.39e-01 100.0% 76.0%
4451587 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.67 58.0 5.30e-01 100.0% 86.4%
4064793 1.1.7.11 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM 0.66 59.0 5.47e-01 100.0% 80.0%
4938551 1.1.9.0 beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.66 49.0 4.75e-01 79.7% 100.0%
4018781 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.65 59.0 5.20e-01 100.0% 81.7%
5022986 304.113.1.0 a+b two layers › Alpha-beta plaits › Alpha subunit of glutamate synthase, insertion domain › Alpha subunit of glutamate synthase, insertion domain 0.65 52.0 5.23e-01 86.1% 92.5%
3603610 11.1.1.33 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Arch_flagellin 0.65 57.0 5.10e-01 100.0% 79.8%
3772547 304.9.1.0 a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD 0.65 52.0 4.41e-01 87.3% 71.5%
3868227 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.65 56.0 5.33e-01 100.0% 87.4%
5081164 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.64 56.0 5.08e-01 100.0% 81.8%
4071868 1.1.7.11 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM 0.64 56.0 5.38e-01 100.0% 90.0%
4999960 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.64 56.0 5.03e-01 100.0% 90.0%
4969148 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.63 54.0 5.09e-01 93.7% 84.2%
3809348 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.63 54.0 4.69e-01 100.0% 79.2%
3990697 304.9.1.0 a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD 0.63 50.0 4.70e-01 86.1% 78.9%
4103518 304.102.1.4 a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruB_N 0.62 53.0 3.92e-01 94.9% 65.6%
4941685 304.8.1.2 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT 0.62 48.0 5.07e-01 84.8% 94.3%
4558386 304.102.1.4 a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruB_N 0.62 53.0 3.91e-01 94.9% 67.3%
4931484 304.102.1.7 a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › Pus10_C 0.62 53.0 3.86e-01 94.9% 68.0%
3956348 304.102.1.1 a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_2 0.62 53.0 4.07e-01 94.9% 50.0%
4604111 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.62 48.0 4.87e-01 83.5% 83.7%
3602819 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.62 54.0 5.11e-01 100.0% 87.4%
4031786 1.1.13.20 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Prophage_tailD1 0.61 45.0 4.43e-01 78.5% 85.9%
4883825 1.1.13.20 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Prophage_tailD1 0.61 47.0 4.52e-01 83.5% 82.6%
1501 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.61 54.0 5.11e-01 98.7% 90.4%
1918525 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.61 52.0 4.91e-01 100.0% 89.0%
5033279 304.102.1.4 a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruB_N 0.61 51.0 3.66e-01 93.7% 44.2%
3259959 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.61 54.0 5.00e-01 100.0% 84.0%
184486 1.1.13.26 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › GpP-like_1st 0.61 44.0 4.43e-01 78.5% 84.0%
4197562 304.102.1.6 a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruB_N,TruB_C_2 0.61 51.0 3.67e-01 94.9% 57.6%
4025731 304.102.1.1 a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_2 0.60 52.0 3.88e-01 94.9% 46.5%
3667432 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.60 53.0 5.01e-01 100.0% 95.8%
4646504 304.102.1.4 a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruB_N 0.60 51.0 3.84e-01 94.9% 61.5%
4259247 1.11.1.1 beta barrels › cradle loop barrel › Photosystem II accessory factor Psb28 › Photosystem II accessory factor Psb28 › Psb28 0.60 50.0 4.68e-01 93.7% 87.9%
3317802 304.8.1.45 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant 0.60 52.0 4.95e-01 98.7% 91.6%
4632892 304.102.1.4 a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruB_N 0.60 50.0 3.62e-01 93.7% 60.9%
4022662 304.9.1.0 a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD 0.60 46.0 4.57e-01 84.8% 87.1%
5036163 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.60 51.0 4.60e-01 100.0% 73.9%
3445191 304.8.1.45 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant 0.59 47.0 4.82e-01 86.1% 98.7%
3450309 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.59 50.0 4.71e-01 93.7% 94.7%
5035837 12.5.1.0 beta sandwiches › Glycosyl hydrolase domain-like › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related 0.59 52.0 4.47e-01 97.5% 92.8%
5036917 304.102.1.13 a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruB_C_2 0.59 48.0 3.99e-01 92.4% 70.7%
4977671 304.102.1.0 a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase 0.59 47.0 3.80e-01 88.6% 61.9%
3833068 319.1.1.1 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.59 44.0 4.15e-01 82.3% 99.0%
4065488 304.102.1.4 a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruB_N 0.58 47.0 3.50e-01 93.7% 63.0%
3541117 11.1.1.179 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 0.57 49.0 4.55e-01 100.0% 81.0%
3248012 11.1.1.29 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TIG 0.57 49.0 4.69e-01 100.0% 82.1%
5068929 304.102.1.2 a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruD 0.57 49.0 3.71e-01 94.9% 93.0%
4501615 2003.1.5.68 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › MTS_N 0.57 42.0 3.31e-01 79.7% 90.6%
3505821 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.56 47.0 4.35e-01 97.5% 79.0%
4941622 305.1.1.1 a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase › RNA_pol_L 0.56 48.0 4.63e-01 98.7% 85.6%
5030328 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.55 47.0 4.46e-01 100.0% 79.0%
3613752 206.1.1.1 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.55 47.0 3.32e-01 98.7% 49.1%
3637257 206.1.1.11 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › APH 0.55 47.0 3.25e-01 98.7% 64.3%
4309712 11.1.1.66 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › MdoG 0.54 46.0 4.43e-01 98.7% 82.1%
5035134 12.1.1.114 beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › DUF2341 0.54 47.0 4.15e-01 100.0% 66.7%
4241505 11.1.5.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.53 47.0 4.34e-01 100.0% 94.3%
5035871 12.1.1.0 beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain 0.53 45.0 4.29e-01 98.7% 86.3%
3932880 206.1.1.1 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.53 46.0 3.17e-01 100.0% 48.3%
4874278 11.1.1.117 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › EpoR_lig-bind 0.53 44.0 4.03e-01 98.7% 70.2%
3891879 11.1.1.117 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › EpoR_lig-bind 0.52 44.0 4.08e-01 98.7% 76.2%
3622525 206.1.1.1 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.52 46.0 3.17e-01 100.0% 47.9%
3622526 206.1.1.1 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.52 46.0 3.17e-01 100.0% 48.4%
4448430 206.1.1.74 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, PK_Tyr_Ser-Thr 0.52 45.0 3.00e-01 100.0% 56.0%
3743560 206.1.1.1 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.51 43.0 3.02e-01 100.0% 49.7%
4974179 304.4.1.0 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel 0.51 39.0 3.61e-01 86.1% 73.6%
3560360 11.1.1.1370 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C1-set, V-set 0.51 40.0 3.15e-01 94.9% 36.4%
4258556 11.1.1.66 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › MdoG 0.51 43.0 4.08e-01 98.7% 81.0%
3912840 11.1.1.97 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set 0.50 42.0 3.90e-01 98.7% 81.0%
D4 medium residues 140-199
PDB
Domain cluster: representative
CATH (59)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4ac9C04 2.40.10.190 Mainly Beta › Beta Barrel › Thrombin, subunit H › translation elongation factor selb, chain A, domain 4 0.73 63.0 5.77e-01 100.0% 75.0%
1ep3B01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.72 63.0 5.41e-01 100.0% 87.9%
6oqrA01 2.40.30.20 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.71 63.0 5.51e-01 100.0% 65.6%
6f2mA02 2.40.30.290 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.71 63.0 5.56e-01 100.0% 72.4%
3p26B02 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.70 62.0 5.23e-01 100.0% 79.2%
2ey4D00 2.40.10.230 Mainly Beta › Beta Barrel › Thrombin, subunit H › Probable tRNA pseudouridine synthase domain 0.70 61.0 5.73e-01 100.0% 84.0%
3gqbA01 2.40.30.20 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.69 61.0 5.81e-01 100.0% 84.5%
1zunB02 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.69 61.0 5.36e-01 100.0% 80.0%
2yweA02 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.69 61.0 5.17e-01 100.0% 77.0%
5gxuB01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.69 61.0 4.86e-01 100.0% 81.1%
4dk0A02 2.40.30.170 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain 0.68 59.0 5.21e-01 100.0% 88.9%
3t05A02 2.40.33.10 Mainly Beta › Beta Barrel › M1 Pyruvate Kinase; Domain 3 › PK beta-barrel domain-like 0.68 59.0 5.09e-01 100.0% 75.3%
3qtgA02 2.40.33.10 Mainly Beta › Beta Barrel › M1 Pyruvate Kinase; Domain 3 › PK beta-barrel domain-like 0.68 60.0 5.18e-01 100.0% 81.9%
7oo1A01 2.40.33.10 Mainly Beta › Beta Barrel › M1 Pyruvate Kinase; Domain 3 › PK beta-barrel domain-like 0.68 58.0 5.36e-01 96.7% 89.6%
5eanA01 2.40.30.270 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.68 57.0 4.83e-01 100.0% 71.3%
3gg8C03 2.40.33.10 Mainly Beta › Beta Barrel › M1 Pyruvate Kinase; Domain 3 › PK beta-barrel domain-like 0.67 58.0 5.04e-01 100.0% 74.2%
7r6yA01 2.40.33.10 Mainly Beta › Beta Barrel › M1 Pyruvate Kinase; Domain 3 › PK beta-barrel domain-like 0.66 56.0 4.95e-01 96.7% 78.3%
5z0uA03 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.66 48.0 4.24e-01 100.0% 52.2%
4ecnA02 2.60.40.3540 Mainly Beta › Sandwich › Immunoglobulin-like › Domain of unknown function DUF4458 0.66 57.0 4.61e-01 100.0% 61.5%
1a3wB03 2.40.33.10 Mainly Beta › Beta Barrel › M1 Pyruvate Kinase; Domain 3 › PK beta-barrel domain-like 0.65 57.0 4.89e-01 100.0% 75.3%
2dpyA00 3.40.50.12240 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.65 54.0 3.33e-01 100.0% 14.9%
6lf2B01 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.65 47.0 3.80e-01 80.0% 99.2%
1kjzA03 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.65 55.0 4.86e-01 100.0% 76.1%
2f1lA01 2.40.30.60 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › RimM 0.65 55.0 4.94e-01 100.0% 75.3%
3zn6A02 2.60.40.3410 Mainly Beta › Sandwich › Immunoglobulin-like › 0.64 55.0 4.97e-01 100.0% 80.5%
2aaaA02 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.62 45.0 3.84e-01 100.0% 46.1%
3sz6A00 2.60.40.1850 Mainly Beta › Sandwich › Immunoglobulin-like › 0.62 47.0 3.91e-01 86.7% 100.0%
4j27A02 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.62 48.0 4.35e-01 100.0% 60.7%
2bpsA00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.62 50.0 4.58e-01 100.0% 67.9%
4zgnB00 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.61 51.0 4.41e-01 100.0% 71.8%
1txqA00 2.30.30.190 Mainly Beta › Roll › SH3 type barrels. › CAP Gly-rich-like domain 0.60 43.0 4.05e-01 76.7% 94.6%
4ba0A03 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.60 39.0 4.18e-01 100.0% 80.4%
2h5eA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.60 49.0 3.77e-01 100.0% 38.4%
2hrvA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.59 43.0 3.82e-01 81.7% 64.2%
4fmrB01 2.70.50.70 Mainly Beta › Distorted Sandwich › Coagulation Factor XIII; Chain A, domain 1 › 0.59 49.0 3.84e-01 100.0% 52.3%
4psrA02 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.58 47.0 3.96e-01 100.0% 53.3%
4dipH00 3.10.50.40 Alpha Beta › Roll › Chitinase A; domain 3 › 0.58 46.0 3.76e-01 90.0% 85.7%
3u31A02 3.30.1600.10 Alpha Beta › 2-Layer Sandwich › SIR2/SIRT2 'Small Domain' › SIR2/SIRT2 'Small Domain' 0.57 46.0 3.97e-01 91.7% 63.6%
7plsA02 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.57 46.0 4.12e-01 100.0% 63.4%
3lx7A01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.56 37.0 4.11e-01 71.7% 89.1%
4mbsA00 1.20.1070.10 Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins 0.56 42.0 2.66e-01 83.3% 17.6%
2w1jA00 2.40.260.10 Mainly Beta › Beta Barrel › Sortase; Chain: A; › Sortase 0.56 39.0 2.85e-01 76.7% 45.6%
2cjsA01 2.60.40.150 Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain 0.56 45.0 3.50e-01 100.0% 37.9%
2m4vA00 2.20.28.270 Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › RNA polymerase-binding protein A 0.56 37.0 3.41e-01 80.0% 51.2%
1ei5A02 2.40.128.50 Mainly Beta › Beta Barrel › Lipocalin › 0.55 39.0 3.56e-01 76.7% 95.1%
3bc9A01 2.60.40.1220 Mainly Beta › Sandwich › Immunoglobulin-like › 0.54 42.0 3.86e-01 100.0% 62.4%
3bb7A01 3.90.70.50 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Streptopain (SpeB) 0.54 46.0 3.41e-01 100.0% 77.6%
6kwaA01 2.60.120.330 Mainly Beta › Sandwich › Jelly Rolls › B-lactam Antibiotic, Isopenicillin N Synthase; Chain 0.53 38.0 2.70e-01 85.0% 77.7%
2yfoA03 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.53 45.0 3.93e-01 100.0% 92.7%
4iupB01 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.52 36.0 3.64e-01 73.3% 87.1%
3n91A02 2.40.128.420 Mainly Beta › Beta Barrel › Lipocalin › 0.52 38.0 3.04e-01 81.7% 94.1%
2oq8A00 2.60.40.2930 Mainly Beta › Sandwich › Immunoglobulin-like › 0.52 44.0 3.39e-01 100.0% 80.7%
3cp2A02 2.40.30.260 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.52 42.0 3.74e-01 98.3% 90.9%
2ciqA00 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.52 36.0 2.44e-01 76.7% 55.4%
2xn2A03 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.51 44.0 3.83e-01 100.0% 91.7%
1a9xB02 3.40.50.880 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Class I glutamine amidotransferase (GATase) domain 0.51 43.0 2.96e-01 100.0% 28.9%
7xoiP01 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.50 39.0 3.61e-01 85.0% 100.0%
5whzH02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.50 41.0 3.43e-01 100.0% 65.9%
4fl4F02 2.60.40.4130 Mainly Beta › Sandwich › Immunoglobulin-like › 0.50 41.0 3.19e-01 100.0% 38.9%
ECOD (72)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4074297 1.1.7.9 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › tRNA-synt_2c 0.78 70.0 5.61e-01 100.0% 58.3%
3930882 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.74 64.0 5.57e-01 100.0% 84.2%
3634374 1.1.7.17 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.73 53.0 5.65e-01 85.0% 92.0%
3975132 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.73 65.0 5.64e-01 100.0% 65.6%
None 0.73 65.0 4.01e-01 100.0% 18.5%
3781314 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.73 64.0 5.60e-01 100.0% 80.0%
5051090 1.1.7.17 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.72 65.0 5.87e-01 100.0% 76.2%
3303056 1.1.7.19 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GTP_EFTU_D2 0.72 52.0 4.95e-01 76.7% 85.7%
4880433 1.1.7.17 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.72 62.0 5.92e-01 100.0% 82.9%
2448699 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.72 63.0 6.09e-01 100.0% 86.8%
3973553 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.71 63.0 6.01e-01 100.0% 84.3%
4273414 1.1.7.17 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.71 63.0 5.99e-01 100.0% 84.3%
3513769 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.71 60.0 5.65e-01 100.0% 77.3%
3177070 7558.1.1.0 a/b three-layered sandwiches › Glycerol-3-phosphate (1)-acyltransferase › Glycerol-3-phosphate (1)-acyltransferase › Glycerol-3-phosphate (1)-acyltransferase 0.71 62.0 5.72e-01 100.0% 85.0%
3292420 1.1.7.17 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.71 62.0 5.45e-01 100.0% 65.6%
4047241 1.1.7.17 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.70 62.0 5.30e-01 100.0% 62.1%
3987212 1.1.15.1 beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like › PK 0.70 61.0 5.13e-01 100.0% 73.3%
4943228 1.1.7.146 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_Xtn 0.70 62.0 6.09e-01 100.0% 92.3%
3204011 1.1.7.17 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.70 62.0 5.42e-01 100.0% 66.7%
4407497 1.1.7.17 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.70 62.0 6.07e-01 100.0% 92.3%
3785974 3613.1.1.1 beta barrels › Protein CLP1 C-terminal domain › Protein CLP1 C-terminal domain › Protein CLP1 C-terminal domain › Clp1 0.70 61.0 4.69e-01 100.0% 88.5%
5078547 1.1.7.17 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.70 62.0 5.30e-01 100.0% 63.2%
3710309 1.1.7.19 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GTP_EFTU_D2 0.69 62.0 5.06e-01 100.0% 66.4%
5080901 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.69 61.0 5.53e-01 100.0% 73.8%
4316004 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.69 60.0 5.40e-01 100.0% 69.4%
3590326 1.1.15.1 beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like › PK 0.69 60.0 5.06e-01 100.0% 70.5%
4984743 1.1.15.1 beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like › PK 0.69 61.0 5.22e-01 100.0% 75.8%
4128405 1.1.7.17 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.69 60.0 5.72e-01 100.0% 84.3%
4204303 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.69 60.0 5.23e-01 100.0% 65.6%
3556566 3613.1.1.1 beta barrels › Protein CLP1 C-terminal domain › Protein CLP1 C-terminal domain › Protein CLP1 C-terminal domain › Clp1 0.68 59.0 4.74e-01 100.0% 84.2%
3388074 1.1.7.11 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM 0.67 58.0 5.17e-01 100.0% 80.0%
3244240 4081.1.1.5 beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Peptidase_M1_N 0.67 57.0 3.92e-01 100.0% 26.7%
4671232 3613.1.1.1 beta barrels › Protein CLP1 C-terminal domain › Protein CLP1 C-terminal domain › Protein CLP1 C-terminal domain › Clp1 0.67 57.0 4.99e-01 100.0% 89.5%
4945827 1.1.8.0 beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain 0.66 56.0 4.99e-01 100.0% 80.0%
5031810 3613.1.1.0 beta barrels › Protein CLP1 C-terminal domain › Protein CLP1 C-terminal domain › Protein CLP1 C-terminal domain 0.65 57.0 5.32e-01 100.0% 89.3%
4505321 284.4.1.0 a+b two layers › FKBP-like › Archaeal FKBP insertion domain › Archaeal FKBP insertion domain 0.65 46.0 4.76e-01 76.7% 90.9%
4952455 1.1.8.4 beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › eIF2_C 0.65 55.0 4.91e-01 100.0% 80.9%
4126506 375.1.1.128 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Zn_ribbon_SprT 0.64 39.0 4.21e-01 73.3% 74.0%
3602123 1.1.8.4 beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › eIF2_C 0.64 54.0 5.03e-01 100.0% 79.5%
4963446 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.63 48.0 4.67e-01 81.7% 100.0%
5043602 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.63 51.0 4.44e-01 100.0% 58.9%
4091907 4.1.1.25 beta barrels › SH3 › SH3 › SH3 › PAZ 0.61 50.0 3.95e-01 93.3% 86.7%
3276828 11.1.1.698 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_TgrO1 0.61 54.0 4.82e-01 100.0% 74.1%
3256507 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.61 52.0 4.71e-01 100.0% 74.1%
4982152 11.1.4.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.61 50.0 4.29e-01 100.0% 70.0%
3270694 11.1.1.29 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TIG 0.60 52.0 4.60e-01 100.0% 78.9%
3691410 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.60 48.0 3.85e-01 91.7% 91.5%
5073930 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.60 51.0 4.72e-01 100.0% 77.5%
3436022 4.1.1.175 beta barrels › SH3 › SH3 › SH3 › MSSS 0.60 45.0 4.64e-01 86.7% 87.3%
3622991 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.59 47.0 3.83e-01 91.7% 90.0%
4585317 4.1.1.175 beta barrels › SH3 › SH3 › SH3 › MSSS 0.58 43.0 4.51e-01 85.0% 85.5%
3675341 4.1.1.175 beta barrels › SH3 › SH3 › SH3 › MSSS 0.58 44.0 4.60e-01 88.3% 89.1%
5047975 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.58 50.0 4.44e-01 100.0% 75.6%
4979453 11.1.1.237 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › MG4 0.58 48.0 4.37e-01 100.0% 71.1%
3271989 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.58 48.0 4.32e-01 100.0% 71.1%
5052983 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.57 47.0 4.29e-01 100.0% 81.1%
4048461 11.1.1.335 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › GlgB_N 0.57 50.0 4.20e-01 100.0% 57.1%
4169657 4.1.1.175 beta barrels › SH3 › SH3 › SH3 › MSSS 0.57 42.0 4.47e-01 85.0% 94.0%
4975232 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.57 47.0 4.34e-01 96.7% 91.3%
3512784 4.1.1.25 beta barrels › SH3 › SH3 › SH3 › PAZ 0.56 46.0 3.67e-01 91.7% 84.0%
4516378 4.1.1.175 beta barrels › SH3 › SH3 › SH3 › MSSS 0.56 40.0 3.84e-01 76.7% 64.3%
3842649 11.1.1.584 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CATSPERE_NTD2 0.56 46.0 3.84e-01 100.0% 72.5%
3818309 4.1.1.25 beta barrels › SH3 › SH3 › SH3 › PAZ 0.56 45.0 3.62e-01 93.3% 85.4%
4968580 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.56 48.0 4.69e-01 100.0% 95.4%
5042986 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.55 39.0 3.98e-01 76.7% 93.3%
3709157 10.41.1.1 beta sandwiches › jelly-roll › Protein Hikeshi jelly-roll domain › Protein Hikeshi jelly-roll domain › Hikeshi-like_N 0.53 43.0 3.46e-01 93.3% 72.8%
4800664 12.1.1.28 beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Glyco_hydro_106 0.53 39.0 4.04e-01 100.0% 94.4%
3181439 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.53 42.0 3.56e-01 91.7% 91.7%
5077839 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.53 44.0 3.74e-01 100.0% 55.5%
4293453 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.53 42.0 3.90e-01 91.7% 80.0%
3239741 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.52 44.0 3.83e-01 100.0% 61.1%
3275824 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.51 43.0 3.67e-01 95.0% 76.0%