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hypothetical_protein_MIV102R
Euk-VirInvertebrate_iridescent_virus_3
hypothetical_protein_MIV102R__YP_654674__Invertebrate_iridescent_virus_3__345201
Identity
- Accession:
- YP_654674 ↗
- Protein ID:
- hypothetical_protein_MIV102R
- Kingdom:
- euk
Quality
70.0
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Megaviricetes›
Pimascovirales›
Iridoviridae›
Chloriridovirus›
Invertebrate_iridescent_virus_3
TaxID: 345201
Cluster
View cluster (2 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 3-56
Domain cluster:
representative
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2zdiB00 | 1.10.287.370 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.96 | 65.0 | 5.01e-01 | 70.4% | 35.8% |
| 3aeiA00 | 1.10.287.370 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.83 | 57.0 | 4.72e-01 | 72.2% | 41.5% |
| 6n8eA02 | 3.30.559.30 | Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Nonribosomal peptide synthetase, condensation domain | 0.73 | 44.0 | 2.80e-01 | 83.3% | 12.7% |
| 2ffgA00 | 3.30.720.20 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Protein of unknown function DUF1797 | 0.66 | 45.0 | 3.89e-01 | 70.4% | 51.2% |
| 3bjoA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.66 | 56.0 | 4.49e-01 | 94.4% | 67.0% |
| 2vqcA00 | 1.10.10.1470 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › F-112 protein-like | 0.62 | 40.0 | 3.72e-01 | 74.1% | 51.4% |
| 2hqyA01 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.58 | 39.0 | 2.98e-01 | 70.4% | 44.6% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3603208 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.85 | 69.0 | 6.30e-01 | 87.0% | 98.6% |
| 4012962 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.83 | 56.0 | 3.58e-01 | 70.4% | 17.8% |
| 3615693 | 304.48.1.0 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like | 0.75 | 58.0 | 3.83e-01 | 94.4% | 20.5% |
| 3672413 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.62 | 52.0 | 4.34e-01 | 90.7% | 63.3% |
| 3811338 | 109.4.1.2260 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_1, TPR_6, TPR_19 | 0.60 | 51.0 | 3.19e-01 | 92.6% | 43.4% |
D2
medium
residues 67-99
Domain cluster:
representative
CATH (32)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3k59A06 | 1.10.287.690 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › B family DNA polymerase, finger domain | 0.80 | 57.0 | 5.04e-01 | 75.8% | 57.4% |
| 1ukfA00 | 3.90.70.20 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › | 0.79 | 65.0 | 4.09e-01 | 100.0% | 18.6% |
| 3tdvA02 | 3.90.1200.10 | Alpha Beta › Alpha-Beta Complex › Aminoglycoside 3'-phosphotransferase; Chain: A, domain 2 › Aminoglycoside phosphotransferase (APH), C-terminal lobe | 0.79 | 65.0 | 3.97e-01 | 100.0% | 16.0% |
| 1yzmA00 | 4.10.860.20 | Few Secondary Structures › Irregular › DNA Excision Repair, Uvrb; Chain A › Rabenosyn, Rab binding domain | 0.78 | 55.0 | 4.96e-01 | 75.8% | 58.7% |
| 1z0jB00 | 4.10.860.20 | Few Secondary Structures › Irregular › DNA Excision Repair, Uvrb; Chain A › Rabenosyn, Rab binding domain | 0.77 | 54.0 | 4.72e-01 | 75.8% | 52.9% |
| 3ltoA02 | 3.30.70.890 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › GHMP kinase, C-terminal domain | 0.76 | 54.0 | 3.54e-01 | 75.8% | 20.1% |
| 1vmgA00 | 1.10.287.1080 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like | 0.75 | 53.0 | 3.96e-01 | 75.8% | 32.9% |
| 2yxhA00 | 1.10.287.1080 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like | 0.75 | 53.0 | 3.64e-01 | 75.8% | 23.9% |
| 3craB01 | 1.10.287.1080 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like | 0.73 | 53.0 | 3.90e-01 | 75.8% | 31.4% |
| 4tq1A03 | 1.10.246.190 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › Autophagy protein Apg5, helix rich domain | 0.73 | 58.0 | 4.93e-01 | 93.9% | 75.9% |
| 4u1cA01 | 4.10.860.10 | Few Secondary Structures › Irregular › DNA Excision Repair, Uvrb; Chain A › UVR domain | 0.73 | 51.0 | 4.45e-01 | 75.8% | 51.9% |
| 7e9uA01 | 1.50.10.10 | Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › | 0.72 | 52.0 | 2.89e-01 | 93.9% | 5.8% |
| 3fdqA01 | 1.20.120.1030 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Motility repressor MogR, DNA-binding domain | 0.69 | 59.0 | 4.03e-01 | 100.0% | 28.7% |
| 2ra1A03 | 1.20.58.770 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.69 | 48.0 | 3.94e-01 | 75.8% | 58.7% |
| 4g09A03 | 1.20.5.1300 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.68 | 49.0 | 4.20e-01 | 75.8% | 47.3% |
| 2f93B00 | 1.10.287.470 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.68 | 57.0 | 4.96e-01 | 97.0% | 94.1% |
| 2qvaA02 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.67 | 47.0 | 4.17e-01 | 75.8% | 50.9% |
| 5jajA03 | 1.20.1320.30 | Mainly Alpha › Up-down Bundle › phosphoenolpyruvate carboxylase, domain 3 › | 0.67 | 54.0 | 3.77e-01 | 97.0% | 54.3% |
| 7tzoA01 | 1.10.1070.11 | Mainly Alpha › Orthogonal Bundle › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, Domain 5 › Phosphatidylinositol 3-/4-kinase, catalytic domain | 0.67 | 47.0 | 3.03e-01 | 78.8% | 15.5% |
| 6he1B01 | 1.10.287.40 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain | 0.65 | 48.0 | 3.94e-01 | 78.8% | 51.6% |
| 3nymA00 | 6.10.290.10 | Special › Helix non-globular › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.64 | 51.0 | 3.55e-01 | 97.0% | 79.0% |
| 4efcA03 | 1.10.40.30 | Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase Protein R1; domain 1 › Fumarase/aspartase (C-terminal domain) | 0.63 | 53.0 | 4.46e-01 | 100.0% | 57.4% |
| 5jc3A02 | 1.20.1320.30 | Mainly Alpha › Up-down Bundle › phosphoenolpyruvate carboxylase, domain 3 › | 0.63 | 50.0 | 3.46e-01 | 97.0% | 49.2% |
| 4k51B00 | 1.25.40.860 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.63 | 51.0 | 3.30e-01 | 100.0% | 20.1% |
| 3r6nA02 | 1.20.58.1060 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.62 | 47.0 | 3.05e-01 | 84.8% | 19.4% |
| 4ar9A02 | 1.10.390.20 | Mainly Alpha › Orthogonal Bundle › Neutral Protease; domain 2 › | 0.61 | 47.0 | 3.13e-01 | 87.9% | 21.8% |
| 3gffA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.61 | 49.0 | 2.86e-01 | 93.9% | 20.3% |
| 2hnhA01 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.60 | 51.0 | 3.03e-01 | 100.0% | 20.4% |
| 1kaeA03 | 1.20.5.1300 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.60 | 46.0 | 4.01e-01 | 84.8% | 49.1% |
| 2ouwB00 | 1.20.1290.10 | Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like | 0.59 | 49.0 | 3.35e-01 | 100.0% | 26.5% |
| 2jqtA00 | 1.20.1280.40 | Mainly Alpha › Up-down Bundle › Monooxygenase › HHA | 0.58 | 43.0 | 3.80e-01 | 87.9% | 54.4% |
| 1zhxA04 | 3.30.70.3490 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.54 | 48.0 | 3.18e-01 | 100.0% | 74.0% |
ECOD (42)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3552824 | 3877.1.1.1 ↗ | alpha bundles › Membrane protein insertase YidC-related › Membrane protein insertase YidC-related › Membrane protein insertase YidC › 60KD_IMP | 0.86 | 73.0 | 4.36e-01 | 100.0% | 16.0% |
| 3193662 | 592.1.1.1 ↗ | alpha arrays › PWI domain-like › PWI domain › PWI domain › PWI | 0.83 | 69.0 | 5.26e-01 | 100.0% | 41.2% |
| 3640310 | 5076.2.1.1 ↗ | alpha complex topology › Mitochondrial ADP/ATP carrier-like › Putative sulfate permease CysZ › Putative sulfate permease CysZ › EI24 | 0.81 | 68.0 | 4.07e-01 | 100.0% | 14.0% |
| 4640528 | 4146.1.1.0 ↗ | alpha bundles › YqgQ-like › YqgQ-like › YqgQ-like | 0.81 | 58.0 | 5.43e-01 | 75.8% | 67.5% |
| 3280308 | 192.11.1.0 ↗ | alpha bundles › Long alpha-hairpin › C-terminal UvrC-binding domain of UvrB › C-terminal UvrC-binding domain of UvrB | 0.80 | 57.0 | 5.59e-01 | 75.8% | 77.1% |
| 4883518 | 304.1.1.0 ↗ | a+b two layers › Alpha-beta plaits › GHMP Kinase, C-terminal domain › GHMP Kinase, C-terminal domain | 0.80 | 57.0 | 4.40e-01 | 75.8% | 39.7% |
| 3230775 | 192.1.1.25 ↗ | alpha bundles › Long alpha-hairpin › GreA transcript cleavage protein, N-terminal domain › GreA transcript cleavage protein, N-terminal domain › VPS18_RING_C | 0.80 | 57.0 | 3.87e-01 | 75.8% | 24.5% |
| 4433045 | 507.1.1.0 ↗ | alpha arrays › DnaB helicase N-terminal domain-related › DnaB helicase N-terminal domain-related › DnaB helicase N-terminal domain-related | 0.79 | 56.0 | 3.67e-01 | 75.8% | 20.0% |
| 991025 | 192.1.1.0 ↗ | alpha bundles › Long alpha-hairpin › GreA transcript cleavage protein, N-terminal domain › GreA transcript cleavage protein, N-terminal domain | 0.79 | 57.0 | 5.13e-01 | 75.8% | 60.0% |
| 4930198 | 605.1.1.2 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › H-kinase_dim | 0.79 | 56.0 | 4.56e-01 | 75.8% | 45.0% |
| 5036797 | 3291.1.1.0 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related | 0.79 | 56.0 | 3.50e-01 | 75.8% | 15.9% |
| 3213282 | 616.1.1.21 ↗ | alpha arrays › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain › DUF4473 | 0.77 | 55.0 | 4.34e-01 | 100.0% | 36.0% |
| 4998253 | 4953.1.1.0 ↗ | beta barrels › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like | 0.76 | 60.0 | 5.16e-01 | 100.0% | 53.3% |
| 3900350 | 7005.1.1.2 ↗ | a+b duplicates or obligate multimers › LUBAC-tethering domain › LUBAC-tethering domain › LUBAC-tethering domain › LTM | 0.76 | 52.0 | 4.70e-01 | 72.7% | 57.8% |
| 4973347 | 515.1.1.4 ↗ | alpha arrays › Transcription factor STAT-4 N-domain › Transcription factor STAT-4 N-domain › Transcription factor STAT-4 N-domain › EMC3_TMCO1 | 0.75 | 54.0 | 3.37e-01 | 75.8% | 15.9% |
| 3738041 | 192.5.1.1 ↗ | alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat › HR1 | 0.75 | 53.0 | 3.91e-01 | 75.8% | 31.8% |
| 3808016 | 109.4.1.883 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 | 0.75 | 53.0 | 3.59e-01 | 75.8% | 22.5% |
| 4066875 | 7005.1.1.2 ↗ | a+b duplicates or obligate multimers › LUBAC-tethering domain › LUBAC-tethering domain › LUBAC-tethering domain › LTM | 0.75 | 53.0 | 4.62e-01 | 75.8% | 54.0% |
| 3650242 | 109.4.1.883 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 | 0.74 | 57.0 | 3.47e-01 | 84.8% | 14.0% |
| 4936633 | 3877.1.1.0 ↗ | alpha bundles › Membrane protein insertase YidC-related › Membrane protein insertase YidC-related › Membrane protein insertase YidC | 0.74 | 53.0 | 3.23e-01 | 75.8% | 13.2% |
| 4100663 | 7575.1.1.11 ↗ | a/b three-layered sandwiches › Caspase-like › Caspase-like › Caspase-like › PF31181 | 0.73 | 57.0 | 3.29e-01 | 87.9% | 9.4% |
| 5072052 | 3718.1.1.0 ↗ | alpha bundles › Flagellar protein fliT › Flagellar protein fliT › Flagellar protein fliT | 0.73 | 51.0 | 4.14e-01 | 75.8% | 41.5% |
| 3375617 | 192.5.1.30 ↗ | alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat › DUF641 | 0.73 | 51.0 | 3.89e-01 | 75.8% | 33.8% |
| 3643501 | 192.1.1.47 ↗ | alpha bundles › Long alpha-hairpin › GreA transcript cleavage protein, N-terminal domain › GreA transcript cleavage protein, N-terminal domain › DUF641 | 0.72 | 52.0 | 4.20e-01 | 78.8% | 41.5% |
| 5039485 | 3877.1.1.0 ↗ | alpha bundles › Membrane protein insertase YidC-related › Membrane protein insertase YidC-related › Membrane protein insertase YidC | 0.72 | 52.0 | 3.20e-01 | 75.8% | 13.5% |
| 3182551 | 5076.2.1.9 ↗ | alpha complex topology › Mitochondrial ADP/ATP carrier-like › Putative sulfate permease CysZ › Putative sulfate permease CysZ › Choline_transpo | 0.72 | 53.0 | 3.23e-01 | 100.0% | 14.6% |
| 3662300 | 109.4.1.883 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 | 0.71 | 57.0 | 3.16e-01 | 87.9% | 7.6% |
| 5024703 | 3877.1.1.0 ↗ | alpha bundles › Membrane protein insertase YidC-related › Membrane protein insertase YidC-related › Membrane protein insertase YidC | 0.71 | 51.0 | 3.15e-01 | 75.8% | 14.2% |
| 3350838 | 109.4.1.420 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR | 0.71 | 54.0 | 3.38e-01 | 87.9% | 14.7% |
| 5049087 | 1045.1.1.0 ↗ | alpha bundles › Rad50-binding domain of Mre11 › Rad50-binding domain of Mre11 › Rad50-binding domain of Mre11 | 0.71 | 54.0 | 4.93e-01 | 84.8% | 62.2% |
| 3340974 | 109.4.1.883 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 | 0.71 | 55.0 | 3.49e-01 | 87.9% | 18.8% |
| 4945676 | 159.1.2.0 ↗ | alpha bundles › all-alpha NTP pyrophosphatases › all-alpha NTP pyrophosphatases › MazG-related | 0.70 | 49.0 | 3.64e-01 | 75.8% | 30.0% |
| 3914660 | 604.1.1.95 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › KIAA1755_C | 0.69 | 54.0 | 4.00e-01 | 87.9% | 36.5% |
| 4930709 | 3877.1.1.0 ↗ | alpha bundles › Membrane protein insertase YidC-related › Membrane protein insertase YidC-related › Membrane protein insertase YidC | 0.68 | 54.0 | 3.45e-01 | 100.0% | 27.7% |
| 3441654 | 109.3.1.163 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank, Ank_2, Ank_4, Ank_5 | 0.68 | 58.0 | 3.30e-01 | 100.0% | 10.7% |
| 3676669 | 109.4.1.775 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.67 | 55.0 | 3.74e-01 | 97.0% | 25.8% |
| 3616364 | 3877.1.1.1 ↗ | alpha bundles › Membrane protein insertase YidC-related › Membrane protein insertase YidC-related › Membrane protein insertase YidC › 60KD_IMP | 0.66 | 54.0 | 3.33e-01 | 100.0% | 46.0% |
| 3227443 | 375.10.1.2 ↗ | few secondary structure elements › Rubredoxin-like › Zinc finger domain of DNA polymerase-alpha › Zinc finger domain of DNA polymerase-alpha › zf-DPOE | 0.65 | 50.0 | 3.99e-01 | 84.8% | 53.1% |
| 3788436 | 5076.2.1.9 ↗ | alpha complex topology › Mitochondrial ADP/ATP carrier-like › Putative sulfate permease CysZ › Putative sulfate permease CysZ › Choline_transpo | 0.62 | 47.0 | 2.74e-01 | 93.9% | 8.8% |
| 4949471 | 3877.1.1.0 ↗ | alpha bundles › Membrane protein insertase YidC-related › Membrane protein insertase YidC-related › Membrane protein insertase YidC | 0.62 | 54.0 | 3.36e-01 | 97.0% | 55.4% |
| 5061540 | 2498.1.1.147 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › DUF7897 | 0.61 | 51.0 | 2.99e-01 | 100.0% | 20.3% |
| 4960168 | 3877.1.1.0 ↗ | alpha bundles › Membrane protein insertase YidC-related › Membrane protein insertase YidC-related › Membrane protein insertase YidC | 0.56 | 48.0 | 3.08e-01 | 100.0% | 83.0% |