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hypothetical_protein_MIV105R

Euk-Vir

Invertebrate_iridescent_virus_3

hypothetical_protein_MIV105R__YP_654677__Invertebrate_iridescent_virus_3__345201

Identity

Accession:
YP_654677 ↗
Protein ID:
hypothetical_protein_MIV105R
Kingdom:
euk

Quality

69.1 mean pLDDT

Taxonomy

Bamfordvirae› Nucleocytoviricota› Megaviricetes› Pimascovirales› Iridoviridae› Chloriridovirus› Invertebrate_iridescent_virus_3

TaxID: 345201

Cluster

View cluster (2 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 28-147
PDB
D2 high residues 156-245
PDB
Domain cluster: representative
CATH (25)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1w98B02 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.76 69.0 6.37e-01 100.0% 79.8%
4rocA01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.76 69.0 6.63e-01 100.0% 87.4%
3h4cA02 1.10.472.110 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › 0.75 69.0 6.44e-01 100.0% 87.3%
1c9bA02 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.75 66.0 6.24e-01 98.9% 81.1%
2pmiB00 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.74 67.0 5.05e-01 100.0% 54.9%
2w96A02 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.74 67.0 6.20e-01 100.0% 82.3%
3k7aM01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.71 62.0 5.74e-01 100.0% 75.0%
6rxaA01 1.10.40.30 Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase Protein R1; domain 1 › Fumarase/aspartase (C-terminal domain) 0.70 48.0 4.88e-01 82.2% 72.4%
2pq7A00 1.10.3210.10 Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 0.64 56.0 4.58e-01 100.0% 71.1%
3hi0A03 1.10.3210.10 Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 0.63 56.0 4.38e-01 100.0% 67.7%
3cnhB02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.63 43.0 4.78e-01 81.1% 92.6%
7y9hB01 1.10.600.10 Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase 0.63 55.0 3.82e-01 100.0% 59.7%
2oyoA02 1.20.1290.10 Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like 0.60 43.0 3.87e-01 74.4% 74.4%
3g2eB00 3.40.920.10 Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate-ferredoxin Oxidoreductase; domain 3 › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III 0.59 50.0 4.10e-01 98.9% 93.0%
3frqB00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.59 42.0 3.40e-01 88.9% 37.5%
6k9pB02 1.20.1300.20 Mainly Alpha › Up-down Bundle › 3 helical TM bundles of succinate and fumarate reductases › Peptidase C65 Otubain, subdomain 2 0.59 42.0 3.49e-01 74.4% 99.3%
1kblA05 1.20.80.30 Mainly Alpha › Up-down Bundle › Acyl-CoA Binding Protein › 0.57 40.0 4.11e-01 75.6% 76.4%
1xvpB00 1.10.565.10 Mainly Alpha › Orthogonal Bundle › Retinoid X Receptor › Retinoid X Receptor 0.56 48.0 3.64e-01 100.0% 81.7%
4iejA00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.56 39.0 4.20e-01 74.4% 90.7%
2ph5A02 3.30.360.30 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › homospermidine synthase like 0.56 43.0 3.03e-01 83.3% 71.6%
2gbbB00 1.20.59.10 Mainly Alpha › Up-down Bundle › Chorismate Mutase Domain, subunit A › Chorismate mutase 0.55 39.0 3.28e-01 74.4% 80.6%
1nubA02 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.53 45.0 3.86e-01 93.3% 88.2%
2iw3A02 1.20.1390.20 Mainly Alpha › Up-down Bundle › PWI domain › 0.52 37.0 3.78e-01 76.7% 84.4%
3e0vB01 3.40.1380.20 Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate Kinase; Chain: A, domain 1 › Pyruvate kinase, C-terminal domain 0.51 41.0 3.43e-01 87.8% 58.4%
1ed1A00 1.10.150.90 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Immunodeficiency lentiviruses, gag gene matrix protein p17 0.51 40.0 3.81e-01 88.9% 99.1%
ECOD (45)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3890040 101.1.10.3 ↗ alpha arrays › HTH › HTH › Cyclin-like › TFIIB 0.78 69.0 5.91e-01 100.0% 62.1%
5053418 101.1.10.3 ↗ alpha arrays › HTH › HTH › Cyclin-like › TFIIB 0.77 68.0 6.85e-01 98.9% 95.6%
3271854 101.1.10.1 ↗ alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N 0.77 70.0 5.66e-01 100.0% 58.8%
5064400 101.1.10.0 ↗ alpha arrays › HTH › HTH › Cyclin-like 0.77 68.0 6.67e-01 97.8% 90.5%
3469981 101.1.10.1 ↗ alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N 0.76 69.0 5.81e-01 100.0% 63.3%
3215455 101.1.10.1 ↗ alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N 0.76 69.0 5.75e-01 100.0% 58.1%
3737512 101.1.10.1 ↗ alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N 0.76 69.0 5.80e-01 100.0% 60.0%
3600574 101.1.10.1 ↗ alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N 0.76 69.0 5.64e-01 100.0% 57.0%
3172193 101.1.10.1 ↗ alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N 0.76 69.0 5.50e-01 100.0% 51.4%
4864645 101.1.10.1 ↗ alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N 0.76 69.0 5.77e-01 100.0% 60.0%
3566008 101.1.10.9 ↗ alpha arrays › HTH › HTH › Cyclin-like › Cyclin 0.76 68.0 5.31e-01 100.0% 72.1%
3932619 101.1.10.1 ↗ alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N 0.75 69.0 5.92e-01 100.0% 65.2%
5042604 101.1.10.3 ↗ alpha arrays › HTH › HTH › Cyclin-like › TFIIB 0.75 69.0 5.69e-01 100.0% 89.7%
3277203 101.1.10.0 ↗ alpha arrays › HTH › HTH › Cyclin-like 0.75 68.0 5.65e-01 100.0% 76.8%
4030134 101.1.10.3 ↗ alpha arrays › HTH › HTH › Cyclin-like › TFIIB 0.75 66.0 5.80e-01 100.0% 65.2%
3535295 101.1.10.1 ↗ alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N 0.75 68.0 5.93e-01 100.0% 68.9%
3593798 101.1.10.0 ↗ alpha arrays › HTH › HTH › Cyclin-like 0.75 68.0 5.53e-01 100.0% 71.5%
3701576 101.1.10.9 ↗ alpha arrays › HTH › HTH › Cyclin-like › Cyclin 0.75 67.0 5.52e-01 100.0% 72.7%
4999090 101.1.10.0 ↗ alpha arrays › HTH › HTH › Cyclin-like 0.75 68.0 5.95e-01 98.9% 71.5%
3708822 101.1.10.1 ↗ alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N 0.75 68.0 5.84e-01 100.0% 64.3%
3798156 101.1.10.0 ↗ alpha arrays › HTH › HTH › Cyclin-like 0.75 67.0 5.18e-01 100.0% 69.0%
3440941 101.1.10.21 ↗ alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N,Cyclin_C 0.75 68.0 4.84e-01 100.0% 51.9%
3926027 101.1.10.1 ↗ alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N 0.75 67.0 5.72e-01 100.0% 64.8%
3229635 101.1.10.1 ↗ alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N 0.75 68.0 5.90e-01 100.0% 66.7%
3328518 101.1.10.9 ↗ alpha arrays › HTH › HTH › Cyclin-like › Cyclin 0.75 67.0 5.29e-01 100.0% 67.0%
3624985 101.1.10.21 ↗ alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N,Cyclin_C 0.74 67.0 4.64e-01 100.0% 31.2%
2841 101.1.10.1 ↗ alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N 0.73 66.0 5.82e-01 100.0% 70.5%
4956628 101.1.10.3 ↗ alpha arrays › HTH › HTH › Cyclin-like › TFIIB 0.73 66.0 5.71e-01 100.0% 90.0%
5042711 101.1.10.0 ↗ alpha arrays › HTH › HTH › Cyclin-like 0.73 67.0 5.64e-01 100.0% 62.1%
3454921 101.1.10.3 ↗ alpha arrays › HTH › HTH › Cyclin-like › TFIIB 0.73 66.0 5.02e-01 100.0% 45.9%
3450000 101.1.10.0 ↗ alpha arrays › HTH › HTH › Cyclin-like 0.73 65.0 5.76e-01 98.9% 72.3%
3998882 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.62 43.0 4.47e-01 76.7% 77.6%
4946202 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.61 44.0 4.66e-01 78.9% 87.5%
4034131 101.1.1.248 ↗ alpha arrays › HTH › HTH › Three-helical HTH › DUF772 0.60 48.0 4.63e-01 87.8% 87.6%
3649101 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.60 37.0 3.59e-01 100.0% 54.0%
4008422 184.1.1.4 ↗ alpha arrays › Nucleoside phosphorylase/phosphoribosyltransferase-N › Nucleoside phosphorylase/phosphoribosyltransferase-N › Nucleoside phosphorylase/phosphoribosyltransferase-N › PF29395 0.59 44.0 4.39e-01 80.0% 98.9%
3269624 605.1.1.0 ↗ alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.58 40.0 4.03e-01 73.3% 89.5%
3959708 608.1.1.0 ↗ alpha arrays › AhpD-like › AhpD-like › AhpD-like 0.58 41.0 3.43e-01 74.4% 57.5%
3859287 144.1.1.0 ↗ alpha arrays › PGBD-like › PGBD-like › PGBD-like 0.54 35.0 3.67e-01 81.1% 72.5%
3909467 180.1.1.0 ↗ alpha bundles › Acid phosphatase/Vanadium-dependent haloperoxidase › Acid phosphatase/Vanadium-dependent haloperoxidase › Acid phosphatase/Vanadium-dependent haloperoxidase 0.53 42.0 3.28e-01 91.1% 70.7%
3291009 186.1.1.0 ↗ alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N 0.53 38.0 3.70e-01 78.9% 75.2%
3987752 162.1.1.2 ↗ alpha bundles › PTS-regulatory domain, PRD › PTS-regulatory domain, PRD › PTS-regulatory domain, PRD › PRD_Mga 0.52 39.0 3.56e-01 80.0% 91.2%
4172555 162.1.1.1 ↗ alpha bundles › PTS-regulatory domain, PRD › PTS-regulatory domain, PRD › PTS-regulatory domain, PRD › PRD 0.51 39.0 3.77e-01 82.2% 71.4%
3167817 101.1.2.251 ↗ alpha arrays › HTH › HTH › winged helix domain › DUF6581 0.51 44.0 3.48e-01 97.8% 86.5%
5081699 186.1.1.4 ↗ alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_4 0.51 44.0 4.46e-01 96.7% 100.0%