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hypothetical_protein_MIV106R

Euk-Vir

Invertebrate_iridescent_virus_3

hypothetical_protein_MIV106R__YP_654678__Invertebrate_iridescent_virus_3__345201

Identity

Accession:
YP_654678 ↗
Protein ID:
hypothetical_protein_MIV106R
Kingdom:
euk

Quality

80.2 mean pLDDT

Taxonomy

Bamfordvirae› Nucleocytoviricota› Megaviricetes› Pimascovirales› Iridoviridae› Chloriridovirus› Invertebrate_iridescent_virus_3

TaxID: 345201

Cluster

View cluster (35 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 58-223
PDB
Domain cluster: rep: MK064563__AZI75768.1__SBFV2-gp01__00001__D223-383
Pfam (3)
AccessionNameScoreE-valueQ covHMM cov
PF05970.21 best PIF1 107.1 1.40e-30 99.4% 69.5%
PF13604.13 AAA_30 34.2 3.10e-08 92.8% 68.1%
PF13245.13 AAA_19 38.9 1.30e-09 86.1% 91.8%
D2 high residues 276-422
PDB
Domain cluster: rep: helicase-2__YP_003429432__Artogeia_rapae_granulovirus__362830__D268-377
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3mp6A05 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.73 33.0 4.95e-01 74.8% 100.0%
1wfwA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.67 32.0 4.48e-01 83.0% 91.9%
5zwzA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.65 32.0 4.56e-01 70.7% 100.0%
1fx0B01 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.59 27.0 3.57e-01 74.8% 78.5%
ECOD (48)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4101587 4.1.1.140 ↗ beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom 0.88 62.0 7.32e-01 80.3% 100.0%
3220797 4.1.1.140 ↗ beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom 0.87 61.0 7.21e-01 78.9% 100.0%
1746358 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.85 61.0 7.19e-01 82.3% 100.0%
3708644 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.85 65.0 7.39e-01 81.6% 100.0%
3251896 4.1.1.140 ↗ beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom 0.85 65.0 7.35e-01 81.6% 100.0%
3491785 4.1.1.140 ↗ beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom 0.85 65.0 7.33e-01 78.2% 100.0%
3022070 4.1.1.140 ↗ beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom 0.84 64.0 7.26e-01 82.3% 100.0%
3385654 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.84 65.0 7.25e-01 79.6% 100.0%
3740116 4.1.1.140 ↗ beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom 0.83 66.0 6.34e-01 81.6% 100.0%
3700780 4.1.1.140 ↗ beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom 0.83 64.0 6.48e-01 78.9% 100.0%
3701220 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.83 64.0 6.59e-01 78.9% 100.0%
3177112 4.1.1.140 ↗ beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom 0.83 67.0 5.65e-01 83.0% 100.0%
3786183 4.1.1.140 ↗ beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom 0.83 65.0 6.71e-01 81.0% 100.0%
3363136 4.1.1.140 ↗ beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom 0.82 65.0 7.25e-01 81.0% 100.0%
3172952 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.82 65.0 5.97e-01 81.0% 100.0%
3788541 4.1.1.140 ↗ beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom 0.82 65.0 5.90e-01 81.0% 100.0%
3267759 4.1.1.140 ↗ beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom 0.82 63.0 6.13e-01 79.6% 100.0%
3255737 4.1.1.140 ↗ beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom 0.81 65.0 7.20e-01 81.6% 100.0%
3714141 4.1.1.140 ↗ beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom 0.81 61.0 6.27e-01 77.6% 100.0%
3868320 4.1.1.65 ↗ beta barrels › SH3 › SH3 › SH3 › 53-BP1_Tudor 0.80 32.0 4.82e-01 77.6% 84.6%
3558774 4.1.1.104 ↗ beta barrels › SH3 › SH3 › SH3 › KN17_SH3 0.80 33.0 5.32e-01 74.8% 98.3%
3699523 4.1.1.140 ↗ beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom 0.80 60.0 5.80e-01 77.6% 100.0%
3597575 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.79 64.0 6.39e-01 83.0% 100.0%
2561577 4.1.1.28 ↗ beta barrels › SH3 › SH3 › SH3 › BPL_C 0.79 30.0 4.71e-01 78.2% 86.9%
3702850 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.78 62.0 6.38e-01 81.6% 100.0%
3200493 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.77 27.0 4.49e-01 82.3% 87.3%
3723061 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.76 60.0 6.31e-01 81.6% 100.0%
3936726 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.76 29.0 4.92e-01 73.5% 100.0%
3502290 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.75 32.0 5.07e-01 74.8% 100.0%
3370388 4.1.1.118 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_15 0.74 34.0 5.07e-01 76.9% 100.0%
3816455 4.1.1.140 ↗ beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom 0.74 59.0 6.35e-01 82.3% 100.0%
3810217 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.74 27.0 4.62e-01 74.8% 100.0%
3669214 4.1.1.140 ↗ beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom 0.73 62.0 6.58e-01 89.8% 100.0%
3668420 4.1.1.140 ↗ beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom 0.73 68.0 6.21e-01 100.0% 77.9%
3357239 4.1.1.140 ↗ beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom 0.71 61.0 5.96e-01 89.8% 86.1%
3221094 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.70 53.0 6.00e-01 79.6% 100.0%
4139778 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.69 34.0 4.76e-01 88.4% 95.9%
None — 0.68 52.0 3.76e-01 98.0% 29.2%
3815495 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.68 33.0 4.78e-01 80.3% 100.0%
3457163 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.68 34.0 4.60e-01 75.5% 90.0%
3501574 4.1.1.118 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_15 0.67 35.0 4.87e-01 76.9% 100.0%
3556321 4.1.1.118 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_15 0.67 36.0 4.91e-01 78.9% 98.8%
4003717 4.1.1.50 ↗ beta barrels › SH3 › SH3 › SH3 › MIB_HERC2 0.61 32.0 4.41e-01 88.4% 100.0%
3926120 4.1.1.169 ↗ beta barrels › SH3 › SH3 › SH3 › DUF4819 0.60 36.0 3.66e-01 85.0% 59.3%
3941320 4.1.1.303 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_retrovirus 0.59 30.0 4.19e-01 85.0% 97.3%
4929875 4.11.1.0 ↗ beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase 0.56 34.0 4.09e-01 93.9% 90.0%
3609031 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.53 34.0 4.13e-01 92.5% 96.0%
3592332 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.50 33.0 3.92e-01 90.5% 93.3%