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hypothetical_protein_MIV109L
Euk-VirInvertebrate_iridescent_virus_3
hypothetical_protein_MIV109L__YP_654681__Invertebrate_iridescent_virus_3__345201
Identity
- Accession:
- YP_654681 ↗
- Protein ID:
- hypothetical_protein_MIV109L
- Kingdom:
- euk
Quality
78.2
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Megaviricetes›
Pimascovirales›
Iridoviridae›
Chloriridovirus›
Invertebrate_iridescent_virus_3
TaxID: 345201
Cluster
View cluster (2 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-75
Domain cluster:
representative
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1zcdA00 | 1.20.1530.10 | Mainly Alpha › Up-down Bundle › Na+/H+ antiporter like fold › Na+/H+ antiporter like domain | 0.57 | 45.0 | 2.97e-01 | 90.4% | 64.4% |
| 2vfrA03 | 3.30.70.2530 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.57 | 41.0 | 3.89e-01 | 100.0% | 64.4% |
| 6tmfM00 | 3.30.70.600 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 | 0.55 | 48.0 | 4.34e-01 | 100.0% | 94.1% |
| 2oap202 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.51 | 41.0 | 2.89e-01 | 93.2% | 84.1% |
| 1x60A01 | 3.30.70.1070 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Sporulation related repeat | 0.51 | 39.0 | 4.00e-01 | 100.0% | 88.9% |
| 4kt5C00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 37.0 | 3.50e-01 | 80.8% | 64.8% |
| 2zplB00 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.51 | 29.0 | 2.71e-01 | 74.0% | 42.6% |
| 6zwwC01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.51 | 43.0 | 3.38e-01 | 100.0% | 88.4% |
| 1d6uA03 | 2.70.98.20 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Copper amine oxidase, catalytic domain | 0.50 | 39.0 | 2.51e-01 | 87.7% | 92.7% |
ECOD (17)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5000243 | 2004.1.1.120 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ResIII | 0.70 | 61.0 | 4.19e-01 | 100.0% | 29.1% |
| 3261672 | 3696.1.1.0 ↗ | a+b two layers › DNA helicase UvsW N-terminal a+b domain-related › DNA helicase UvsW N-terminal a+b domain-related › DNA helicase UvsW N-terminal a+b domain-related | 0.65 | 57.0 | 5.33e-01 | 100.0% | 87.8% |
| 3588223 | 304.156.1.0 ↗ | a+b two layers › Alpha-beta plaits › DNA translocase FtsK N-terminal domain › DNA translocase FtsK N-terminal domain | 0.56 | 44.0 | 4.16e-01 | 87.7% | 84.4% |
| 3509135 | 375.1.1.233 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Zn_ribbon_IFT122_C | 0.56 | 29.0 | 2.94e-01 | 100.0% | 50.7% |
| 5017777 | 289.1.1.2 ↗ | a+b complex topology › Peptide deformylase › Peptide deformylase › Peptide deformylase › Zn_protease | 0.55 | 42.0 | 3.35e-01 | 86.3% | 78.8% |
| 3250567 | 331.18.1.4 ↗ | a+b two layers › TBP-like › C-terminal TBP-like domain of Roc › C-terminal TBP-like domain of Roc › COR-B | 0.55 | 46.0 | 3.62e-01 | 100.0% | 54.9% |
| 3460270 | 603.1.1.143 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › DUF547 | 0.54 | 45.0 | 3.28e-01 | 93.2% | 64.9% |
| 3785811 | 109.4.1.1125 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_TAF2_C | 0.54 | 37.0 | 2.34e-01 | 71.2% | 21.2% |
| 4297859 | 314.1.1.2 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA-synt_2b | 0.53 | 44.0 | 2.93e-01 | 93.2% | 70.2% |
| 3714994 | 633.23.1.0 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin | 0.52 | 42.0 | 3.17e-01 | 93.2% | 97.9% |
| 3169674 | 101.1.21.1 ↗ | alpha arrays › HTH › HTH › HTH in T7 RNA polymerase › RPOL_N | 0.51 | 43.0 | 2.95e-01 | 93.2% | 73.5% |
| 3948387 | 1104.1.1.1 ↗ | a+b complex topology › Helicase Cch N-terminal domain › Helicase Cch N-terminal domain › Helicase Cch N-terminal domain › DUF927 | 0.51 | 37.0 | 3.00e-01 | 78.1% | 68.0% |
| 3690788 | 101.1.21.1 ↗ | alpha arrays › HTH › HTH › HTH in T7 RNA polymerase › RPOL_N | 0.51 | 40.0 | 2.79e-01 | 89.0% | 57.4% |
| 3632684 | 101.1.21.0 ↗ | alpha arrays › HTH › HTH › HTH in T7 RNA polymerase | 0.51 | 40.0 | 2.51e-01 | 89.0% | 31.4% |
| 3724091 | 101.1.21.1 ↗ | alpha arrays › HTH › HTH › HTH in T7 RNA polymerase › RPOL_N | 0.50 | 39.0 | 2.83e-01 | 90.4% | 50.6% |
| 3195871 | 101.1.21.0 ↗ | alpha arrays › HTH › HTH › HTH in T7 RNA polymerase | 0.50 | 39.0 | 2.32e-01 | 89.0% | 21.3% |
| 3456078 | 389.1.1.0 ↗ | few secondary structure elements › EGF-like › EGF-related › EGF/Laminin | 0.50 | 28.0 | 3.34e-01 | 78.1% | 86.7% |
D2
high
residues 79-262
Domain cluster:
rep: MK064563__AZI75768.1__SBFV2-gp01__00001__D223-383
Pfam (3)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00176.30 best | SNF2-rel_dom | 39.7 | 4.40e-10 | 88.6% | 53.8% |
| PF04851.22 | ResIII | 67.4 | 2.10e-18 | 83.2% | 98.2% |
| PF00270.36 | DEAD | 44.6 | 1.80e-11 | 80.4% | 93.4% |