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hypothetical_protein_MPVG_00015

Euk-Vir

Micromonas_pusilla_virus_12T

hypothetical_protein_MPVG_00015__YP_007676084__Micromonas_pusilla_virus_12T__755272

Identity

Accession:
YP_007676084 ↗
Protein ID:
hypothetical_protein_MPVG_00015
Kingdom:
euk

Quality

48.2 mean pLDDT

Taxonomy

Bamfordvirae› Nucleocytoviricota› Megaviricetes› Algavirales› Phycodnaviridae› Prasinovirus› Micromonas_pusilla_virus_12T

TaxID: 755272

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 81-136
PDB
Domain cluster: representative
CATH (21)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4pu7A00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.70 49.0 4.58e-01 75.0% 74.6%
1ixkA01 3.30.70.1170 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Sun protein; domain 3 0.65 43.0 3.58e-01 80.4% 36.2%
2of5H00 1.10.533.10 Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas 0.65 47.0 3.95e-01 78.6% 54.0%
6pw7A02 1.10.150.50 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Transcription Factor, Ets-1 0.63 47.0 4.44e-01 94.6% 66.2%
1ichA00 1.10.533.10 Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas 0.63 45.0 3.97e-01 78.6% 62.1%
4i16A00 1.10.533.10 Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas 0.58 42.0 3.69e-01 78.6% 86.7%
2a5yB01 1.10.533.10 Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas 0.57 41.0 3.42e-01 80.4% 40.4%
2qptA01 1.10.268.20 Mainly Alpha › Orthogonal Bundle › Topoisomerase; domain 3 › 0.57 43.0 3.16e-01 82.1% 30.8%
4y7dA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.56 41.0 2.67e-01 80.4% 39.4%
2wdqC00 1.20.1300.10 Mainly Alpha › Up-down Bundle › 3 helical TM bundles of succinate and fumarate reductases › Fumarate reductase/succinate dehydrogenase, transmembrane subunit 0.56 42.0 3.28e-01 80.4% 81.0%
1nv8B01 1.10.8.10 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain 0.56 45.0 4.33e-01 100.0% 98.6%
3v2lA00 1.10.238.20 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › Pheromone/general odorant binding protein domain 0.56 45.0 3.53e-01 89.3% 44.2%
2r7rA08 1.20.120.1400 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.56 40.0 3.60e-01 92.9% 52.3%
1fadA00 1.10.533.10 Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas 0.55 40.0 3.46e-01 80.4% 75.8%
2zxiA04 1.10.150.570 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › GidA associated domain, C-terminal subdomain 0.54 37.0 3.80e-01 78.6% 75.5%
2g5gX02 1.10.8.760 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Haem-binding uptake, Tiki superfamily, ChaN, domain 2 0.54 38.0 3.75e-01 73.2% 74.6%
1cpyA02 1.10.287.410 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.54 39.0 3.69e-01 80.4% 94.4%
4uobA02 1.10.340.30 Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › Hypothetical protein; domain 2 0.54 41.0 3.36e-01 91.1% 51.6%
3r72A00 1.10.238.20 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › Pheromone/general odorant binding protein domain 0.54 43.0 3.40e-01 89.3% 42.6%
3cz1A00 1.10.238.20 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › Pheromone/general odorant binding protein domain 0.53 42.0 3.31e-01 85.7% 47.0%
3ug9A02 1.20.1070.10 Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins 0.52 45.0 3.01e-01 100.0% 44.0%
ECOD (16)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3483338 110.1.1.0 ↗ alpha arrays › DEATH domain › DEATH domain › DEATH domain 0.77 55.0 4.48e-01 78.6% 41.0%
3611664 3361.1.1.0 ↗ alpha bundles › C-terminal Pdr1-activating domain of J-protein Zuo1 › C-terminal Pdr1-activating domain of J-protein Zuo1 › C-terminal Pdr1-activating domain of J-protein Zuo1 0.69 56.0 5.12e-01 96.4% 95.0%
3486170 110.1.1.0 ↗ alpha arrays › DEATH domain › DEATH domain › DEATH domain 0.69 48.0 4.02e-01 78.6% 41.0%
5068187 632.11.1.0 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like 0.65 48.0 4.42e-01 80.4% 78.4%
3264670 601.7.1.35 ↗ alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain › UFL1_C 0.63 45.0 3.67e-01 78.6% 78.1%
3789508 632.7.1.0 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain 0.62 45.0 4.27e-01 80.4% 94.3%
4205646 181.1.1.0 ↗ alpha bundles › Domain of the SRP/SRP receptor G proteins-like › Domain of the SRP/SRP receptor G-proteins › Domain of the SRP/SRP receptor G-proteins 0.62 47.0 4.53e-01 83.9% 86.2%
3775373 110.1.1.1 ↗ alpha arrays › DEATH domain › DEATH domain › DEATH domain › Death 0.61 43.0 3.62e-01 78.6% 43.6%
3444184 632.3.1.0 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Phosphoprotein XD domain › Phosphoprotein XD domain 0.60 50.0 4.94e-01 92.9% 95.0%
4514726 3317.1.1.0 ↗ alpha arrays › KorB C-terminal domain-like › KorB C-terminal domain › KorB C-terminal domain 0.60 45.0 4.44e-01 89.3% 86.2%
5004727 3567.1.1.0 ↗ a+b duplicates or obligate multimers › MPER trimer › MPER trimer › MPER trimer 0.60 42.0 3.27e-01 76.8% 62.2%
3442073 143.1.1.0 ↗ alpha arrays › PABP domain-like › PABC(PABP) domain › PABC(PABP) domain 0.59 49.0 4.98e-01 91.1% 100.0%
4956322 2006.1.1.0 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like 0.57 42.0 2.94e-01 83.9% 25.1%
3587817 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.56 40.0 3.97e-01 76.8% 98.3%
3735296 603.5.1.0 ↗ alpha bundles › STAT-like › FlgN-like › FlgN-like 0.56 46.0 3.26e-01 94.6% 76.4%
3213894 616.1.1.21 ↗ alpha arrays › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain › DUF4473 0.52 38.0 3.49e-01 78.6% 98.7%