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hypothetical_protein_MPVG_00026

Euk-Vir

Micromonas_pusilla_virus_12T

hypothetical_protein_MPVG_00026__YP_007676094__Micromonas_pusilla_virus_12T__755272

Identity

Accession:: YP_007676094 ↗
Protein ID:: hypothetical_protein_MPVG_00026
Kingdom:: euk

Quality

75.9 mean pLDDT

Taxonomy

Bamfordvirae› Nucleocytoviricota› Megaviricetes› Algavirales› Phycodnaviridae› Prasinovirus› Micromonas_pusilla_virus_12T

TaxID: 755272

Cluster

View cluster (17 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 23-101

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF19208.7 best	DUF5880	89.1	2.40e-25	97.5%	82.3%

CATH (9)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1ybyA02	2.40.50.140	Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins	0.75	34.0	3.79e-01	82.3%	53.1%
2awnC03	2.40.50.140	Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins	0.59	33.0	3.75e-01	79.7%	74.1%
4hikA00	2.40.50.140	Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins	0.54	44.0	3.72e-01	91.1%	72.5%
2o3oA02	3.30.310.160	Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › YycH protein, domain 2	0.54	44.0	3.84e-01	89.9%	65.0%
2pulB01	3.30.200.20	Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1	0.53	39.0	3.72e-01	100.0%	66.3%
1uebA01	2.30.30.30	Mainly Beta › Roll › SH3 type barrels. ›	0.53	31.0	3.44e-01	77.2%	73.0%
4b6mB00	2.30.30.190	Mainly Beta › Roll › SH3 type barrels. › CAP Gly-rich-like domain	0.51	37.0	3.74e-01	83.5%	77.2%
1ixdA00	2.30.30.190	Mainly Beta › Roll › SH3 type barrels. › CAP Gly-rich-like domain	0.51	39.0	3.62e-01	84.8%	69.2%
4l8hB00	3.30.380.10	Alpha Beta › 2-Layer Sandwich › MS2 Viral Coat Protein › MS2 Viral Coat Protein	0.50	41.0	3.56e-01	88.6%	64.2%

ECOD (11)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4475796	2.1.1.0 ↗	beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein	0.60	30.0	3.43e-01	78.5%	61.8%
5083382	2.1.1.13 ↗	beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › eIF-5a	0.58	30.0	3.30e-01	75.9%	60.0%
3389942	708.1.1.4 ↗	beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › FLYWCH	0.58	44.0	4.24e-01	89.9%	71.1%
4062751	2.1.1.13 ↗	beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › eIF-5a	0.56	29.0	3.24e-01	78.5%	60.0%
3625333	220.1.1.0 ↗	beta barrels › PH domain-like › PH domain-like › PH domain-like	0.54	42.0	3.57e-01	88.6%	65.5%
3396803	109.21.1.1 ↗	alpha superhelices › Repetitive alpha hairpins › Nucleoporin NUP85/Nucleoporin NUP145 C-terminal domain › Nucleoporin NUP85/Nucleoporin NUP145 C-terminal domain › Nucleopor_Nup85	0.53	36.0	2.13e-01	78.5%	8.7%
3239103	708.1.1.0 ↗	beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain	0.53	43.0	4.01e-01	89.9%	80.0%
3555838	4.1.1.18 ↗	beta barrels › SH3 › SH3 › SH3 › CAP_GLY	0.52	38.0	3.66e-01	83.5%	68.9%
3831450	4.1.1.18 ↗	beta barrels › SH3 › SH3 › SH3 › CAP_GLY	0.51	37.0	3.61e-01	79.7%	71.1%
2550473	3820.1.1.0 ↗	a+b complex topology › CRISPR-associated endonuclease Cas9 C-terminal domain › CRISPR-associated endonuclease Cas9 C-terminal domain › CRISPR-associated endonuclease Cas9 C-terminal domain	0.50	36.0	3.64e-01	75.9%	98.7%
3566394	4099.1.1.8 ↗	a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › DUF4581	0.50	31.0	2.95e-01	93.7%	49.0%