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hypothetical_protein_MPVG_00048
Euk-VirMicromonas_pusilla_virus_12T
hypothetical_protein_MPVG_00048__YP_007676116__Micromonas_pusilla_virus_12T__755272
Identity
- Accession:
- YP_007676116 ↗
- Protein ID:
- hypothetical_protein_MPVG_00048
- Kingdom:
- euk
Quality
75.7
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Megaviricetes›
Algavirales›
Phycodnaviridae›
Prasinovirus›
Micromonas_pusilla_virus_12T
TaxID: 755272
Cluster
View cluster (12 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-80_173-253_348-397
Domain cluster:
rep: SR-VP_0-2_scaffold_141_4750547_curated_closed_complete_prodigal-single.1__X__X__00570__D2-39_204-271_386-431
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF13450.13 best | NAD_binding_8 | 30.3 | 5.60e-07 | 30.5% | 51.5% |
D2
high
residues 257-340
Domain cluster:
representative
CATH (79)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3ka7A02 | 3.90.660.50 | Alpha Beta › Alpha-Beta Complex › Polyamine Oxidase; Chain A, domain 2 › | 0.69 | 59.0 | 4.47e-01 | 95.2% | 43.7% |
| 2cyyA02 | 3.30.70.920 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain | 0.65 | 51.0 | 4.93e-01 | 94.0% | 74.7% |
| 3dpuB03 | 3.30.310.200 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › | 0.65 | 54.0 | 5.00e-01 | 91.7% | 91.7% |
| 1i1gA02 | 3.30.70.920 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain | 0.65 | 51.0 | 5.30e-01 | 94.0% | 93.5% |
| 4hjhA04 | 3.30.310.50 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Alpha-D-phosphohexomutase, C-terminal domain | 0.64 | 49.0 | 4.63e-01 | 82.1% | 93.1% |
| 2qz8A02 | 3.30.70.920 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain | 0.64 | 49.0 | 4.97e-01 | 94.0% | 86.4% |
| 1qupA01 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.64 | 47.0 | 5.03e-01 | 88.1% | 92.9% |
| 2qa1A02 | 3.30.70.2450 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.64 | 51.0 | 5.26e-01 | 95.2% | 94.9% |
| 2pmbA01 | 3.30.1850.10 | Alpha Beta › 2-Layer Sandwich › MCP/YpsA-like › MoCo carrier protein-like | 0.64 | 47.0 | 4.43e-01 | 81.0% | 92.5% |
| 3im8A02 | 3.30.70.250 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding | 0.63 | 47.0 | 4.99e-01 | 94.0% | 91.8% |
| 2g9oA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.63 | 49.0 | 5.11e-01 | 95.2% | 94.8% |
| 4e9jB01 | 3.30.1370.120 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.63 | 41.0 | 3.48e-01 | 83.3% | 40.6% |
| 2aymA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.63 | 51.0 | 5.18e-01 | 92.9% | 90.4% |
| 2jheA01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.62 | 49.0 | 5.00e-01 | 92.9% | 88.9% |
| 2efpA02 | 3.30.70.920 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain | 0.62 | 50.0 | 4.82e-01 | 94.0% | 75.5% |
| 1whxA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.62 | 50.0 | 4.54e-01 | 92.9% | 65.8% |
| 4p6qA03 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.62 | 49.0 | 4.77e-01 | 92.9% | 76.8% |
| 2aj0A00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.62 | 45.0 | 4.82e-01 | 95.2% | 94.4% |
| 3l4gB03 | 3.30.56.10 | Alpha Beta › 2-Layer Sandwich › Phenylalanyl-tRNA Synthetase; Chain B, domain 1 › | 0.62 | 46.0 | 4.91e-01 | 79.8% | 91.9% |
| 2xmjA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.62 | 44.0 | 4.86e-01 | 83.3% | 100.0% |
| 1utaA00 | 3.30.70.1070 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Sporulation related repeat | 0.61 | 47.0 | 4.83e-01 | 94.0% | 90.9% |
| 1wg1A01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.61 | 48.0 | 5.11e-01 | 91.7% | 100.0% |
| 2hiyA02 | 3.30.70.1260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › bacterial protein sp0830 like | 0.61 | 48.0 | 4.68e-01 | 91.7% | 77.2% |
| 2d69B01 | 3.30.70.150 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RuBisCO large subunit, N-terminal domain | 0.61 | 53.0 | 4.69e-01 | 100.0% | 85.7% |
| 3ezjA02 | 3.30.1370.120 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.61 | 42.0 | 4.60e-01 | 84.5% | 89.7% |
| 1fvqA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.61 | 46.0 | 4.84e-01 | 94.0% | 97.2% |
| 8gk4C02 | 3.30.70.1430 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Multidrug efflux transporter AcrB pore domain | 0.60 | 51.0 | 4.99e-01 | 94.0% | 98.9% |
| 4tshB01 | 2.60.40.740 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.60 | 53.0 | 4.17e-01 | 96.4% | 50.3% |
| 2eyqA07 | 3.90.1150.50 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Transcription-repair-coupling factor, D7 domain | 0.60 | 44.0 | 3.64e-01 | 81.0% | 43.5% |
| 3jcmH04 | 3.30.70.870 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 | 0.60 | 48.0 | 5.00e-01 | 94.0% | 96.1% |
| 2cpdA01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.60 | 48.0 | 5.08e-01 | 92.9% | 97.3% |
| 2jdjA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.60 | 51.0 | 4.77e-01 | 94.0% | 93.3% |
| 1mwyA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.60 | 45.0 | 4.74e-01 | 92.9% | 95.9% |
| 1kn6A00 | 3.30.70.850 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Peptidase S8, pro-domain | 0.60 | 46.0 | 4.92e-01 | 94.0% | 97.3% |
| 3ezjA03 | 3.30.1370.120 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.60 | 38.0 | 4.26e-01 | 82.1% | 96.4% |
| 4e9jA02 | 3.30.1370.120 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.60 | 44.0 | 4.73e-01 | 82.1% | 95.7% |
| 1q8bA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.59 | 51.0 | 4.94e-01 | 96.4% | 93.5% |
| 5koxA02 | 3.30.70.2450 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.59 | 50.0 | 5.00e-01 | 95.2% | 95.3% |
| 6d9mA02 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.59 | 52.0 | 4.30e-01 | 97.6% | 66.9% |
| 1s28A00 | 3.30.1460.10 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.59 | 44.0 | 3.93e-01 | 82.1% | 57.7% |
| 4kyzA00 | 3.30.70.600 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 | 0.59 | 48.0 | 3.91e-01 | 95.2% | 45.5% |
| 2e5gA01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.59 | 46.0 | 4.88e-01 | 90.5% | 98.6% |
| 1p5dX04 | 3.30.310.50 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Alpha-D-phosphohexomutase, C-terminal domain | 0.59 | 47.0 | 4.63e-01 | 89.3% | 97.8% |
| 1rkiA01 | 3.30.70.1650 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › PDO, CxxC motif | 0.58 | 51.0 | 4.87e-01 | 96.4% | 96.9% |
| 2fgcA03 | 3.30.70.1150 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT-like. Chain A, domain 2 | 0.58 | 42.0 | 4.36e-01 | 97.6% | 84.2% |
| 1kvkA02 | 3.30.70.890 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › GHMP kinase, C-terminal domain | 0.58 | 49.0 | 4.10e-01 | 92.9% | 95.9% |
| 4anoA00 | 1.10.510.10 | Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 | 0.58 | 44.0 | 3.38e-01 | 83.3% | 54.5% |
| 3tu3A00 | 3.30.1460.10 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.58 | 43.0 | 3.94e-01 | 82.1% | 64.7% |
| 2l48A00 | 3.30.70.2030 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.58 | 42.0 | 4.21e-01 | 95.2% | 75.3% |
| 1wexA01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.58 | 46.0 | 4.87e-01 | 90.5% | 100.0% |
| 2cpqA01 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.58 | 41.0 | 4.51e-01 | 81.0% | 96.9% |
| 4za1C00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.58 | 48.0 | 4.74e-01 | 95.2% | 89.1% |
| 1y0hB00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.58 | 49.0 | 4.71e-01 | 95.2% | 89.8% |
| 2wbrA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.58 | 45.0 | 4.46e-01 | 94.0% | 82.0% |
| 1sjqA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.57 | 47.0 | 4.72e-01 | 94.0% | 87.5% |
| 1whyA01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.57 | 45.0 | 4.76e-01 | 89.3% | 100.0% |
| 4tqrA01 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.57 | 49.0 | 4.72e-01 | 97.6% | 100.0% |
| 3e3xA01 | 3.30.70.870 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 | 0.57 | 49.0 | 4.48e-01 | 96.4% | 78.8% |
| 2anrA02 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.57 | 42.0 | 4.39e-01 | 82.1% | 88.0% |
| 3pyfA02 | 3.30.70.890 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › GHMP kinase, C-terminal domain | 0.57 | 48.0 | 4.10e-01 | 94.0% | 92.0% |
| 2qsrA01 | 3.90.1150.50 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Transcription-repair-coupling factor, D7 domain | 0.57 | 44.0 | 3.63e-01 | 84.5% | 75.5% |
| 2cpjA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.56 | 48.0 | 4.59e-01 | 100.0% | 81.8% |
| 2hvzA01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.56 | 44.0 | 4.63e-01 | 90.5% | 100.0% |
| 4erdA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.56 | 47.0 | 4.37e-01 | 94.0% | 75.9% |
| 3ajdA01 | 3.30.70.1170 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Sun protein; domain 3 | 0.55 | 38.0 | 4.25e-01 | 88.1% | 100.0% |
| 2m88A01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.55 | 44.0 | 4.40e-01 | 94.0% | 84.9% |
| 2cxiA01 | 3.30.56.10 | Alpha Beta › 2-Layer Sandwich › Phenylalanyl-tRNA Synthetase; Chain B, domain 1 › | 0.55 | 40.0 | 4.17e-01 | 78.6% | 87.3% |
| 4ushA00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.54 | 45.0 | 4.25e-01 | 94.0% | 76.7% |
| 2e9yB00 | 3.40.1160.10 | Alpha Beta › 3-Layer(aba) Sandwich › Carbamate kinase › Acetylglutamate kinase-like | 0.54 | 41.0 | 2.81e-01 | 82.1% | 66.3% |
| 1hskA03 | 3.90.78.10 | Alpha Beta › Alpha-Beta Complex › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 1 › UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain | 0.54 | 45.0 | 4.48e-01 | 100.0% | 90.9% |
| 2dy1A03 | 3.30.70.870 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 | 0.54 | 41.0 | 4.30e-01 | 91.7% | 93.4% |
| 3k17A02 | 3.30.70.890 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › GHMP kinase, C-terminal domain | 0.53 | 43.0 | 3.71e-01 | 90.5% | 96.4% |
| 2if1A00 | 3.30.780.10 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor Eif1 › SUI1-like domain | 0.53 | 40.0 | 3.58e-01 | 95.2% | 55.6% |
| 3tmaA01 | 3.30.2130.30 | Alpha Beta › 2-Layer Sandwich › VC0802-like › | 0.52 | 46.0 | 3.83e-01 | 100.0% | 55.5% |
| 3c9gA01 | 3.30.1440.10 | Alpha Beta › 2-Layer Sandwich › 50s Ribosomal Protein L5; Chain: A, › Ribosomal protein L5 | 0.51 | 43.0 | 3.91e-01 | 100.0% | 89.7% |
| 1zhvA00 | 3.30.2130.10 | Alpha Beta › 2-Layer Sandwich › VC0802-like › VC0802-like | 0.51 | 39.0 | 3.45e-01 | 98.8% | 53.0% |
| 4avaA02 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.51 | 43.0 | 3.45e-01 | 97.6% | 57.4% |
| 4dmzA02 | 3.30.70.2880 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.51 | 42.0 | 3.67e-01 | 95.2% | 62.8% |
| 1lxnA00 | 3.30.70.930 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.51 | 42.0 | 4.09e-01 | 96.4% | 81.6% |
ECOD (95)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3963714 | 304.28.1.2 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain › Sec_GG | 0.73 | 61.0 | 6.14e-01 | 95.2% | 90.6% |
| 4093790 | 304.28.1.2 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain › Sec_GG | 0.71 | 59.0 | 5.93e-01 | 94.0% | 90.6% |
| 5082820 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.69 | 54.0 | 5.83e-01 | 94.0% | 100.0% |
| 4953963 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.69 | 51.0 | 5.37e-01 | 89.3% | 88.0% |
| 3611438 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.69 | 50.0 | 4.89e-01 | 92.9% | 71.1% |
| 4505732 | 304.28.1.2 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain › Sec_GG | 0.68 | 58.0 | 5.61e-01 | 95.2% | 89.5% |
| 5049192 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.68 | 53.0 | 5.29e-01 | 94.0% | 82.4% |
| 4972516 | 304.4.1.1 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg | 0.68 | 53.0 | 5.44e-01 | 94.0% | 90.0% |
| 4929485 | 304.4.1.1 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg | 0.67 | 53.0 | 5.31e-01 | 95.2% | 83.5% |
| 4929768 | 304.4.1.1 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg | 0.67 | 53.0 | 5.53e-01 | 95.2% | 94.7% |
| 5037191 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.67 | 52.0 | 5.63e-01 | 90.5% | 100.0% |
| 5080754 | 304.4.1.1 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg | 0.67 | 53.0 | 5.55e-01 | 94.0% | 96.0% |
| 4986354 | 304.4.1.1 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg | 0.67 | 53.0 | 5.57e-01 | 94.0% | 96.0% |
| 4978613 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.67 | 52.0 | 5.28e-01 | 94.0% | 83.5% |
| 4929345 | 304.4.1.1 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg | 0.67 | 53.0 | 5.30e-01 | 95.2% | 84.5% |
| 4942815 | 304.4.1.1 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg | 0.67 | 53.0 | 5.56e-01 | 95.2% | 96.0% |
| 4935623 | 304.4.1.1 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg | 0.66 | 53.0 | 5.33e-01 | 94.0% | 85.9% |
| 4927517 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.66 | 52.0 | 5.03e-01 | 94.0% | 74.7% |
| 5045160 | 304.4.1.1 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg | 0.66 | 52.0 | 5.36e-01 | 94.0% | 89.9% |
| 3282317 | 304.3.1.1 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain › HMA | 0.66 | 47.0 | 5.29e-01 | 83.3% | 100.0% |
| 4928610 | 304.4.1.1 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg | 0.66 | 52.0 | 5.37e-01 | 95.2% | 90.0% |
| 3700856 | 327.11.2.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) | 0.66 | 50.0 | 4.78e-01 | 82.1% | 78.0% |
| 5078176 | 304.4.1.1 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg | 0.66 | 52.0 | 5.46e-01 | 94.0% | 96.0% |
| 5066727 | 304.4.1.1 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg | 0.65 | 51.0 | 5.28e-01 | 94.0% | 90.0% |
| 3279154 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.65 | 52.0 | 4.92e-01 | 94.0% | 72.0% |
| 4963450 | 304.4.1.1 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg | 0.65 | 51.0 | 4.89e-01 | 94.0% | 72.4% |
| 4929821 | 304.4.1.1 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg | 0.65 | 51.0 | 5.31e-01 | 95.2% | 94.7% |
| 4992403 | 304.128.1.0 ↗ | a+b two layers › Alpha-beta plaits › ferredoxin-like domain in periplasmic region of MacB › ferredoxin-like domain in periplasmic region of MacB | 0.65 | 51.0 | 5.08e-01 | 95.2% | 81.1% |
| 5051131 | 304.4.1.1 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg | 0.65 | 52.0 | 5.43e-01 | 95.2% | 97.3% |
| 3288354 | 304.4.1.1 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg | 0.65 | 51.0 | 5.01e-01 | 94.0% | 78.9% |
| 3954860 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.65 | 54.0 | 5.36e-01 | 95.2% | 87.8% |
| 3667166 | 304.20.1.2 ↗ | a+b two layers › Alpha-beta plaits › PAP/Archaeal CCA-adding enzyme, C-terminal domain › PAP/Archaeal CCA-adding enzyme, C-terminal domain › Nrap_D3 | 0.65 | 53.0 | 4.29e-01 | 90.5% | 97.0% |
| 4451687 | 207.1.1.95 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_14 | 0.64 | 43.0 | 2.73e-01 | 82.1% | 13.2% |
| 3369393 | 304.3.1.1 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain › HMA | 0.64 | 51.0 | 5.08e-01 | 89.3% | 87.8% |
| 3352836 | 304.20.1.2 ↗ | a+b two layers › Alpha-beta plaits › PAP/Archaeal CCA-adding enzyme, C-terminal domain › PAP/Archaeal CCA-adding enzyme, C-terminal domain › Nrap_D3 | 0.64 | 51.0 | 4.19e-01 | 89.3% | 96.4% |
| 3290613 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.64 | 51.0 | 5.02e-01 | 94.0% | 80.0% |
| 4978620 | 304.4.1.1 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg | 0.64 | 50.0 | 4.93e-01 | 94.0% | 78.9% |
| 4975621 | 304.4.1.1 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg | 0.64 | 50.0 | 5.25e-01 | 97.6% | 96.0% |
| 3603288 | 2003.1.5.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases | 0.64 | 48.0 | 5.23e-01 | 94.0% | 97.1% |
| 4984667 | 304.4.1.1 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg | 0.64 | 50.0 | 5.15e-01 | 94.0% | 90.0% |
| 4964899 | 304.4.1.1 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg | 0.64 | 50.0 | 4.92e-01 | 94.0% | 80.0% |
| 4974320 | 304.4.1.1 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg | 0.63 | 50.0 | 5.08e-01 | 95.2% | 90.0% |
| 4929538 | 304.4.1.1 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg | 0.63 | 49.0 | 4.98e-01 | 94.0% | 84.7% |
| 4998704 | 1075.1.2.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain › FtsX | 0.63 | 53.0 | 3.75e-01 | 97.6% | 29.1% |
| 5054197 | 304.16.1.1 ↗ | a+b two layers › Alpha-beta plaits › eEF-1beta-like › eEF-1beta-like › EF1_GNE | 0.63 | 50.0 | 5.17e-01 | 95.2% | 92.5% |
| 3258623 | 304.33.1.3 ↗ | a+b two layers › Alpha-beta plaits › CheY-binding domain of CheA › CheY-binding domain of CheA › R1_ABCA1 | 0.63 | 50.0 | 5.30e-01 | 94.0% | 97.3% |
| 3717171 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.63 | 51.0 | 4.72e-01 | 94.0% | 70.5% |
| 5057051 | 304.130.1.0 ↗ | a+b two layers › Alpha-beta plaits › Uncharacterized protein MK0293 N-terminal domain › Uncharacterized protein MK0293 N-terminal domain | 0.63 | 48.0 | 5.05e-01 | 95.2% | 94.7% |
| 3179049 | 304.20.1.2 ↗ | a+b two layers › Alpha-beta plaits › PAP/Archaeal CCA-adding enzyme, C-terminal domain › PAP/Archaeal CCA-adding enzyme, C-terminal domain › Nrap_D3 | 0.63 | 50.0 | 4.05e-01 | 90.5% | 95.4% |
| 1687102 | 304.11.1.0 ↗ | a+b two layers › Alpha-beta plaits › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Probable ACP-binding domain of malonyl-CoA ACP transacylase | 0.62 | 47.0 | 4.96e-01 | 94.0% | 93.1% |
| 3285190 | 304.4.1.1 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg | 0.62 | 47.0 | 4.62e-01 | 95.2% | 74.7% |
| 5001451 | 304.4.1.1 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg | 0.62 | 48.0 | 4.75e-01 | 94.0% | 78.9% |
| 166656 | 304.4.1.1 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg | 0.62 | 50.0 | 4.92e-01 | 95.2% | 82.2% |
| 4028288 | 304.117.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in YebC › Ferredoxin-like domain in YebC | 0.62 | 48.0 | 5.06e-01 | 95.2% | 94.7% |
| 3269564 | 304.20.1.2 ↗ | a+b two layers › Alpha-beta plaits › PAP/Archaeal CCA-adding enzyme, C-terminal domain › PAP/Archaeal CCA-adding enzyme, C-terminal domain › Nrap_D3 | 0.61 | 48.0 | 3.93e-01 | 86.9% | 95.8% |
| 3198960 | 304.20.1.2 ↗ | a+b two layers › Alpha-beta plaits › PAP/Archaeal CCA-adding enzyme, C-terminal domain › PAP/Archaeal CCA-adding enzyme, C-terminal domain › Nrap_D3 | 0.61 | 51.0 | 4.23e-01 | 95.2% | 95.6% |
| 4414604 | 2004.1.1.272 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › RNA12 | 0.61 | 51.0 | 3.12e-01 | 94.0% | 14.8% |
| 4525955 | 331.2.1.1 ↗ | a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain › PGM_PMM_IV | 0.61 | 53.0 | 5.21e-01 | 96.4% | 98.9% |
| 3837675 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.61 | 47.0 | 3.92e-01 | 92.9% | 46.7% |
| 4578112 | 304.4.1.1 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg | 0.61 | 46.0 | 4.50e-01 | 94.0% | 75.6% |
| 3803472 | 304.3.1.1 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain › HMA | 0.61 | 41.0 | 4.42e-01 | 82.1% | 84.3% |
| 3353750 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.61 | 49.0 | 4.60e-01 | 92.9% | 71.8% |
| 3551746 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.60 | 49.0 | 4.84e-01 | 94.0% | 84.4% |
| 3749613 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.60 | 49.0 | 4.40e-01 | 94.0% | 64.3% |
| 3594154 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.60 | 48.0 | 4.57e-01 | 94.0% | 74.0% |
| 3289139 | 304.48.1.6 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › DNA_pol_A | 0.60 | 50.0 | 4.54e-01 | 92.9% | 93.9% |
| 3474344 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.60 | 49.0 | 4.70e-01 | 92.9% | 78.9% |
| 5043867 | 304.126.1.0 ↗ | a+b two layers › Alpha-beta plaits › ferredoxin-like domain in vacuolar ATP synthase subunit C › ferredoxin-like domain in vacuolar ATP synthase subunit C | 0.59 | 43.0 | 4.49e-01 | 91.7% | 86.7% |
| 3463392 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.59 | 43.0 | 4.74e-01 | 86.9% | 100.0% |
| 3397652 | 2004.1.1.5 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran | 0.59 | 48.0 | 2.92e-01 | 94.0% | 13.2% |
| 3551987 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.59 | 47.0 | 2.84e-01 | 94.0% | 11.3% |
| 3774427 | 304.8.1.54 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_13 | 0.59 | 47.0 | 4.57e-01 | 94.0% | 77.9% |
| 5048300 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.59 | 46.0 | 4.36e-01 | 95.2% | 69.5% |
| 3485236 | 304.48.1.0 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like | 0.59 | 50.0 | 4.21e-01 | 92.9% | 92.1% |
| 3390198 | 304.7.1.1 ↗ | a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors › Propep_M14 | 0.59 | 44.0 | 4.38e-01 | 95.2% | 78.8% |
| 3189591 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.59 | 48.0 | 3.52e-01 | 90.5% | 33.2% |
| 4945047 | 304.159.1.0 ↗ | a+b two layers › Alpha-beta plaits › Alpha-beta plait domain in NisB › Alpha-beta plait domain in NisB | 0.59 | 49.0 | 4.77e-01 | 94.0% | 82.1% |
| 4451107 | 304.8.1.53 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › GlnD_5th | 0.58 | 44.0 | 3.59e-01 | 82.1% | 43.5% |
| 3823903 | 320.1.1.0 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain | 0.58 | 40.0 | 3.61e-01 | 70.2% | 56.5% |
| 4138721 | 101.1.9.20 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › PhetRS_B1 | 0.57 | 42.0 | 4.44e-01 | 78.6% | 90.7% |
| 3714466 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.57 | 47.0 | 4.62e-01 | 95.2% | 86.3% |
| None | — | 0.57 | 47.0 | 4.53e-01 | 94.0% | 81.1% | |
| 3611027 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.56 | 46.0 | 4.68e-01 | 90.5% | 98.8% |
| 3721799 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.56 | 47.0 | 4.66e-01 | 94.0% | 87.8% |
| 3701059 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.56 | 46.0 | 4.50e-01 | 94.0% | 83.2% |
| 3988220 | 4354.1.1.1 ↗ | a+b two layers › TRCF domain › TRCF domain › TRCF domain › TRCF | 0.56 | 43.0 | 3.51e-01 | 84.5% | 70.7% |
| 4337010 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.55 | 41.0 | 4.20e-01 | 81.0% | 96.2% |
| 3411631 | 304.5.1.0 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like | 0.55 | 46.0 | 4.56e-01 | 94.0% | 93.3% |
| 3517530 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.54 | 44.0 | 4.15e-01 | 94.0% | 77.1% |
| 4302478 | 101.1.9.5 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › B5 | 0.53 | 40.0 | 3.94e-01 | 81.0% | 81.1% |
| 5038088 | 304.120.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI | 0.53 | 37.0 | 4.10e-01 | 89.3% | 95.4% |
| 3703967 | 4143.1.1.0 ↗ | a+b two layers › THUMP domain-like › THUMP domain-like › THUMP domain-like | 0.52 | 45.0 | 3.55e-01 | 100.0% | 54.4% |
| 3383298 | 304.24.1.0 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like | 0.51 | 38.0 | 3.99e-01 | 92.9% | 93.3% |
| 3289133 | 101.1.9.5 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › B5 | 0.51 | 37.0 | 3.64e-01 | 78.6% | 76.7% |
| 3172619 | 109.4.1.371 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › RTP1_C1 | 0.50 | 40.0 | 2.36e-01 | 86.9% | 27.7% |
D3
medium
residues 81-121_404-428
Domain cluster:
representative
D4
medium
residues 122-172
Domain cluster:
representative
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4itjB02 | 1.10.510.10 | Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 | 0.63 | 43.0 | 2.95e-01 | 72.5% | 29.8% |
| 3a5yA00 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.57 | 45.0 | 2.79e-01 | 86.3% | 45.5% |
| 7r0kA01 | 1.20.1060.10 | Mainly Alpha › Up-down Bundle › Taq DNA Polymerase; Chain T, domain 4 › Taq DNA Polymerase; Chain T, domain 4 | 0.54 | 43.0 | 3.36e-01 | 88.2% | 48.1% |
| 1a5aB02 | 3.40.50.1100 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.51 | 39.0 | 2.67e-01 | 90.2% | 63.0% |
| 3ragB00 | 3.40.50.410 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain | 0.51 | 37.0 | 2.51e-01 | 82.4% | 58.0% |