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hypothetical_protein_MPVG_00059

Euk-Vir

Micromonas_pusilla_virus_12T

hypothetical_protein_MPVG_00059__YP_007676127__Micromonas_pusilla_virus_12T__755272

Identity

Accession:
YP_007676127 ↗
Protein ID:
hypothetical_protein_MPVG_00059
Kingdom:
euk

Quality

73.9 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 18-75_124-173
PDB
CATH (41)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1x9pA01 2.60.120.550 Mainly Beta › Sandwich › Jelly Rolls › Penton protein; domain 1 0.74 66.0 5.65e-01 95.4% 87.7%
5brqA03 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.72 40.0 4.60e-01 94.4% 74.1%
1p8jA02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.68 59.0 5.55e-01 95.4% 94.7%
1lnsA04 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.67 58.0 4.86e-01 95.4% 89.8%
3iiiA03 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.65 57.0 4.81e-01 96.3% 97.2%
1pgsA02 2.60.120.230 Mainly Beta › Sandwich › Jelly Rolls › 0.64 56.0 4.85e-01 99.1% 95.4%
2wnvD00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.61 53.0 4.98e-01 96.3% 98.5%
5ikuA01 2.60.120.380 Mainly Beta › Sandwich › Jelly Rolls › 0.60 49.0 5.00e-01 93.5% 90.4%
7nitA06 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.60 52.0 4.48e-01 96.3% 96.5%
4f3jA00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.59 51.0 4.71e-01 96.3% 93.7%
1sefA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.59 41.0 3.87e-01 98.1% 58.8%
1pk6C00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.59 51.0 4.85e-01 96.3% 98.4%
3zn6A01 2.60.120.1170 Mainly Beta › Sandwich › Jelly Rolls › 0.59 52.0 4.91e-01 100.0% 97.0%
1yi9A02 2.60.120.230 Mainly Beta › Sandwich › Jelly Rolls › 0.59 52.0 4.81e-01 98.1% 81.8%
4ht1T00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.59 51.0 4.80e-01 96.3% 97.7%
2gh8A01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.58 50.0 4.12e-01 97.2% 75.7%
8begA01 2.60.40.740 Mainly Beta › Sandwich › Immunoglobulin-like › 0.58 47.0 4.16e-01 89.8% 92.5%
2vy0B00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.57 49.0 3.78e-01 96.3% 94.3%
1nqjB00 2.60.120.380 Mainly Beta › Sandwich › Jelly Rolls › 0.57 47.0 4.61e-01 92.6% 83.3%
5aooC00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.57 50.0 4.05e-01 100.0% 78.6%
5vqfD01 2.60.120.970 Mainly Beta › Sandwich › Jelly Rolls › 0.57 49.0 3.92e-01 97.2% 66.4%
1ihmB01 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.57 50.0 4.02e-01 100.0% 76.8%
1a8mA00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.56 48.0 4.32e-01 95.4% 96.1%
1o91A00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.56 49.0 4.62e-01 97.2% 96.9%
3km3B00 2.70.40.10 Mainly Beta › Distorted Sandwich › Deoxyuridine 5'-Triphosphate Nucleotidohydrolase; Chain A › Deoxyuridine triphosphatase (dUTPase) 0.56 47.0 4.23e-01 94.4% 97.4%
3kq4B04 2.60.120.290 Mainly Beta › Sandwich › Jelly Rolls › Spermadhesin, CUB domain 0.55 47.0 4.71e-01 94.4% 91.0%
4llfD02 2.60.40.4030 Mainly Beta › Sandwich › Immunoglobulin-like › 0.55 47.0 4.57e-01 95.4% 90.0%
3esmA00 2.60.40.2230 Mainly Beta › Sandwich › Immunoglobulin-like › Uncharacterised protein YcnI-like PF07987, DUF1775 0.54 45.0 4.22e-01 93.5% 79.0%
1g87A02 2.60.40.710 Mainly Beta › Sandwich › Immunoglobulin-like › Endoglucanase-like 0.54 44.0 4.02e-01 94.4% 92.5%
4fomA03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 37.0 3.96e-01 96.3% 83.7%
4uzgA01 2.60.40.740 Mainly Beta › Sandwich › Immunoglobulin-like › 0.53 47.0 4.22e-01 100.0% 72.4%
2l3uA00 2.170.120.30 Mainly Beta › Beta Complex › RNA Polymerase Alpha Subunit; Chain A, domain 2 › 0.53 34.0 3.61e-01 72.2% 72.4%
3t30C00 2.60.120.340 Mainly Beta › Sandwich › Jelly Rolls › Nucleoplasmin core domain 0.53 42.0 4.41e-01 98.1% 98.9%
1gsoA04 3.90.600.10 Alpha Beta › Alpha-Beta Complex › Glycinamide Ribonucleotide Synthetase; Chain A, domain 4 › Phosphoribosylglycinamide synthetase, C-terminal domain 0.53 37.0 3.94e-01 83.3% 84.9%
2okxA01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.53 46.0 4.04e-01 98.1% 70.2%
5gxxA02 2.60.40.710 Mainly Beta › Sandwich › Immunoglobulin-like › Endoglucanase-like 0.53 47.0 4.16e-01 100.0% 70.7%
3ndzE00 2.60.40.290 Mainly Beta › Sandwich › Immunoglobulin-like › 0.52 43.0 4.37e-01 94.4% 93.5%
2r9qC01 2.70.40.10 Mainly Beta › Distorted Sandwich › Deoxyuridine 5'-Triphosphate Nucleotidohydrolase; Chain A › Deoxyuridine triphosphatase (dUTPase) 0.52 44.0 3.93e-01 96.3% 77.9%
1gw5M02 2.60.40.1170 Mainly Beta › Sandwich › Immunoglobulin-like › Mu homology domain, subdomain B 0.52 44.0 4.10e-01 99.1% 80.0%
3kmhA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.52 38.0 3.14e-01 99.1% 39.9%
4fqpA03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 35.0 3.74e-01 98.1% 83.7%
ECOD (66)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3229302 10.33.1.0 beta sandwiches › jelly-roll › Jelly-roll domain in minor capsid protein › Jelly-roll domain in minor capsid protein 0.83 75.0 6.84e-01 95.4% 98.6%
4941983 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.69 60.0 5.53e-01 95.4% 97.9%
1209147 10.32.1.31 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PepX_C 0.69 60.0 4.85e-01 96.3% 97.1%
4002865 10.32.1.6 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › P_proprotein 0.67 60.0 5.51e-01 98.1% 95.0%
3472554 10.32.1.6 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › P_proprotein 0.66 59.0 5.09e-01 97.2% 95.2%
3172636 543.1.1.7 few secondary structure elements › Frizzled cysteine-rich domain-related › Frizzled cysteine-rich domain-related › Frizzled cysteine-rich domain-related › Mid1 0.65 57.0 5.15e-01 95.4% 94.5%
3880815 10.3.1.14 beta sandwiches › jelly-roll › TNF-like › TNF-like › CTHRC1_C 0.64 55.0 5.05e-01 94.4% 99.3%
3740584 11.2.1.1 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 0.63 45.0 4.18e-01 74.1% 92.6%
3389545 10.32.1.235 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › MBF2 0.63 44.0 4.73e-01 93.5% 86.7%
3391588 4182.1.1.5 beta sandwiches › Agglutinin HPA-like › Agglutinin HPA-like › Agglutinin HPA-like › MBF2 0.63 44.0 4.75e-01 93.5% 87.6%
5055872 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.62 54.0 4.83e-01 96.3% 95.5%
4015340 10.32.1.232 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › DUF4360 0.62 54.0 4.57e-01 97.2% 84.3%
3874421 10.3.1.2 beta sandwiches › jelly-roll › TNF-like › TNF-like › C1q 0.62 53.0 4.95e-01 96.3% 93.6%
3496178 11.2.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain 0.62 44.0 3.99e-01 75.0% 100.0%
3291666 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.61 53.0 5.22e-01 95.4% 99.1%
3629305 10.4.1.1 beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB 0.60 51.0 5.10e-01 94.4% 89.1%
4574158 10.3.1.2 beta sandwiches › jelly-roll › TNF-like › TNF-like › C1q 0.60 52.0 4.82e-01 96.3% 93.6%
3845113 10.32.1.182 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › GP180_GOLD 0.60 53.0 4.85e-01 98.1% 98.6%
4945026 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.60 53.0 5.33e-01 97.2% 96.4%
3784604 11.2.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain 0.59 43.0 3.79e-01 76.9% 98.2%
3307787 207.1.1.43 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_3 0.59 51.0 3.26e-01 95.4% 28.1%
3583509 10.32.1.172 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › DDR1-2_DS-like 0.58 51.0 4.42e-01 98.1% 100.0%
3924066 10.4.1.0 beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain 0.58 51.0 5.02e-01 95.4% 89.6%
3571451 10.4.1.0 beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain 0.58 50.0 4.87e-01 96.3% 85.8%
4021366 10.32.1.175 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Rax2_3 0.58 50.0 4.33e-01 96.3% 98.3%
5049056 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.58 50.0 4.47e-01 96.3% 97.4%
3920281 10.3.1.2 beta sandwiches › jelly-roll › TNF-like › TNF-like › C1q 0.58 50.0 4.62e-01 97.2% 95.0%
3886451 10.3.1.2 beta sandwiches › jelly-roll › TNF-like › TNF-like › C1q 0.58 49.0 4.60e-01 96.3% 93.5%
5010079 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.58 49.0 4.74e-01 93.5% 100.0%
3999080 10.2.1.5 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › TGFb_propeptide 0.58 51.0 4.08e-01 100.0% 56.0%
3904265 10.3.1.2 beta sandwiches › jelly-roll › TNF-like › TNF-like › C1q 0.58 50.0 4.75e-01 100.0% 97.0%
3768503 10.3.1.2 beta sandwiches › jelly-roll › TNF-like › TNF-like › C1q 0.57 50.0 4.62e-01 100.0% 97.2%
3948358 11.1.1.791 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF8393 0.57 43.0 4.50e-01 96.3% 87.0%
3879619 10.3.1.2 beta sandwiches › jelly-roll › TNF-like › TNF-like › C1q 0.57 50.0 4.55e-01 100.0% 91.3%
3936887 10.4.1.0 beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain 0.57 48.0 4.69e-01 95.4% 83.9%
3857871 10.3.1.2 beta sandwiches › jelly-roll › TNF-like › TNF-like › C1q 0.57 49.0 4.40e-01 97.2% 91.0%
3491699 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.56 47.0 4.22e-01 100.0% 64.5%
4969298 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.56 46.0 4.59e-01 95.4% 86.1%
4177785 10.1.1.10 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › MAM 0.56 47.0 4.68e-01 91.7% 98.2%
3483295 10.3.1.0 beta sandwiches › jelly-roll › TNF-like › TNF-like 0.56 48.0 4.41e-01 96.3% 87.6%
3434112 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.56 49.0 4.05e-01 100.0% 78.5%
3986042 11.1.5.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.56 47.0 4.40e-01 95.4% 99.3%
3232310 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.55 33.0 3.49e-01 100.0% 66.3%
2721878 10.2.1.1 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Rhv 0.55 48.0 3.78e-01 100.0% 76.0%
3482650 11.1.5.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.55 49.0 4.35e-01 100.0% 81.9%
5034749 10.1.2.194 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) › Lectin_like 0.55 46.0 3.98e-01 92.6% 98.2%
3912828 10.4.1.1 beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB 0.55 47.0 4.76e-01 95.4% 96.2%
3289297 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.54 42.0 4.40e-01 93.5% 92.0%
2126854 10.42.1.0 beta sandwiches › jelly-roll › ssRNA positive-strand viruses coat protein P (projecting) domain › ssRNA positive-strand viruses coat protein P (projecting) domain 0.54 46.0 4.49e-01 94.4% 93.3%
3314656 207.1.1.119 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_13 0.54 47.0 3.07e-01 99.1% 25.3%
3477594 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.54 48.0 4.28e-01 100.0% 84.5%
3492759 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.54 45.0 4.02e-01 100.0% 63.9%
3241382 10.40.1.1 beta sandwiches › jelly-roll › PHR domain › PHR domain › PHR 0.54 46.0 4.09e-01 97.2% 97.6%
3301025 207.1.1.119 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_13 0.54 46.0 3.56e-01 94.4% 45.9%
3342496 207.1.1.119 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_13 0.54 47.0 3.00e-01 97.2% 21.1%
4589608 10.4.1.1 beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB 0.53 45.0 4.49e-01 95.4% 91.3%
4945167 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.53 45.0 4.34e-01 95.4% 93.6%
3303696 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.53 46.0 4.25e-01 97.2% 80.7%
3036416 11.1.5.8 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › CBM_3 0.53 47.0 4.22e-01 99.1% 69.0%
3884425 11.1.1.566 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › MOV-10_Ig-like 0.53 45.0 4.34e-01 96.3% 82.4%
4013561 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.53 45.0 4.35e-01 96.3% 86.4%
4937817 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.52 43.0 4.37e-01 92.6% 100.0%
4966110 222.1.1.8 a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › 4HBT_2 0.52 33.0 3.15e-01 99.1% 53.6%
3249212 12.2.1.0 beta sandwiches › Glycosyl hydrolase domain-like › Hyaluronate lyase-like, C-terminal domain › Hyaluronate lyase-like, C-terminal domain 0.52 37.0 3.70e-01 75.0% 98.3%
5039943 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.52 41.0 4.20e-01 93.5% 90.5%
3544174 11.1.5.95 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › TMEM132_3rd 0.51 44.0 4.08e-01 100.0% 78.6%