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hypothetical_protein_MPVG_00104
Euk-VirMicromonas_pusilla_virus_12T
hypothetical_protein_MPVG_00104__YP_007676170__Micromonas_pusilla_virus_12T__755272
Identity
- Accession:
- YP_007676170 ↗
- Protein ID:
- hypothetical_protein_MPVG_00104
- Kingdom:
- euk
Quality
86.0
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Megaviricetes›
Algavirales›
Phycodnaviridae›
Prasinovirus›
Micromonas_pusilla_virus_12T
TaxID: 755272
Cluster
View cluster (59 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-178
Domain cluster:
rep: IMGVR_UViG_3300020139_000054-3300020139-Ga0197143_10042646__D29-208
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF09588.17 best | YqaJ | 86.0 | 4.40e-24 | 73.9% | 97.3% |
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3syyA00 | 3.90.320.10 | Alpha Beta › Alpha-Beta Complex › Lambda Exonuclease; Chain A › | 0.88 | 78.0 | 7.53e-01 | 91.5% | 83.5% |
| 3sm4A00 | 3.90.320.10 | Alpha Beta › Alpha-Beta Complex › Lambda Exonuclease; Chain A › | 0.85 | 79.0 | 7.12e-01 | 95.5% | 85.3% |
| 3k93A00 | 3.90.320.10 | Alpha Beta › Alpha-Beta Complex › Lambda Exonuclease; Chain A › | 0.85 | 72.0 | 6.52e-01 | 86.9% | 86.1% |
| 4ic1D00 | 3.90.320.10 | Alpha Beta › Alpha-Beta Complex › Lambda Exonuclease; Chain A › | 0.77 | 64.0 | 6.05e-01 | 92.0% | 73.8% |
| 3l0aA00 | 3.90.320.10 | Alpha Beta › Alpha-Beta Complex › Lambda Exonuclease; Chain A › | 0.77 | 69.0 | 5.94e-01 | 94.9% | 80.1% |
| 1i74A02 | 3.10.310.20 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › DHHA2 domain | 0.70 | 31.0 | 3.81e-01 | 83.5% | 63.0% |
| 7mi4A01 | 3.90.320.10 | Alpha Beta › Alpha-Beta Complex › Lambda Exonuclease; Chain A › | 0.69 | 55.0 | 5.35e-01 | 85.2% | 74.4% |
| 5zyuA01 | 3.90.320.10 | Alpha Beta › Alpha-Beta Complex › Lambda Exonuclease; Chain A › | 0.69 | 58.0 | 5.57e-01 | 88.1% | 92.0% |
| 8d3mI01 | 3.90.320.10 | Alpha Beta › Alpha-Beta Complex › Lambda Exonuclease; Chain A › | 0.65 | 53.0 | 5.02e-01 | 85.8% | 72.5% |
| 4hlbA00 | 3.30.70.2960 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.60 | 33.0 | 4.37e-01 | 92.6% | 100.0% |
| 4q6lA00 | 3.40.50.10610 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ABC-type transport auxiliary lipoprotein component | 0.55 | 32.0 | 3.59e-01 | 98.9% | 73.3% |
ECOD (62)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3262255 | 2008.1.1.50 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › YqaJ | 0.93 | 75.0 | 7.60e-01 | 83.0% | 100.0% |
| 2491448 | 2008.1.1.50 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › YqaJ | 0.91 | 88.0 | 6.50e-01 | 100.0% | 71.0% |
| 3336952 | 2008.1.1.50 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › YqaJ | 0.88 | 80.0 | 6.85e-01 | 93.2% | 65.9% |
| 148043 | 2008.1.1.50 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › YqaJ | 0.88 | 78.0 | 7.58e-01 | 91.5% | 84.8% |
| 3647811 | 2008.1.1.50 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › YqaJ | 0.87 | 83.0 | 7.13e-01 | 98.3% | 70.9% |
| 424674 | 2008.1.1.50 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › YqaJ | 0.86 | 79.0 | 7.14e-01 | 95.5% | 79.0% |
| 4559667 | 2008.1.1.50 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › YqaJ | 0.86 | 73.0 | 6.11e-01 | 88.1% | 75.7% |
| 136966 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.85 | 72.0 | 6.52e-01 | 86.9% | 86.1% |
| 3614372 | 2008.1.1.50 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › YqaJ | 0.84 | 77.0 | 6.56e-01 | 94.3% | 63.8% |
| 3945442 | 2008.1.1.50 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › YqaJ | 0.84 | 79.0 | 7.41e-01 | 97.2% | 86.8% |
| 3395555 | 2008.1.1.50 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › YqaJ | 0.83 | 77.0 | 6.84e-01 | 96.0% | 74.5% |
| 4928680 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.78 | 58.0 | 5.70e-01 | 92.0% | 71.1% |
| 5045797 | 2008.1.1.4 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Cas_Cas4 | 0.78 | 61.0 | 5.95e-01 | 86.4% | 74.7% |
| 4942551 | 2008.1.1.59 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_1 | 0.77 | 65.0 | 6.01e-01 | 90.9% | 70.9% |
| 5012280 | 2008.1.1.59 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_1 | 0.76 | 62.0 | 5.89e-01 | 86.4% | 72.7% |
| 5021430 | 2008.1.1.4 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Cas_Cas4 | 0.75 | 61.0 | 5.93e-01 | 86.4% | 76.8% |
| 4938605 | 2008.1.1.4 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Cas_Cas4 | 0.75 | 62.0 | 5.55e-01 | 85.8% | 84.3% |
| 5012863 | 2008.1.1.59 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_1 | 0.75 | 62.0 | 6.02e-01 | 86.4% | 79.5% |
| 5058512 | 2008.1.1.59 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_1 | 0.74 | 62.0 | 5.19e-01 | 86.9% | 81.4% |
| 5033908 | 2008.1.1.59 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_1 | 0.74 | 61.0 | 5.83e-01 | 86.9% | 84.9% |
| 3992384 | 2008.1.1.29 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Dna2 | 0.74 | 61.0 | 5.63e-01 | 86.4% | 91.8% |
| 5056632 | 2008.1.1.59 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_1 | 0.73 | 60.0 | 5.34e-01 | 85.2% | 82.5% |
| 4955135 | 2008.1.1.159 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Csa1 | 0.72 | 61.0 | 4.92e-01 | 86.9% | 71.9% |
| 5043227 | 2008.1.1.159 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Csa1 | 0.72 | 59.0 | 4.93e-01 | 86.4% | 71.0% |
| 4933935 | 2008.1.1.159 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Csa1 | 0.71 | 59.0 | 4.91e-01 | 86.4% | 74.1% |
| 4932093 | 2008.1.1.59 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_1 | 0.71 | 58.0 | 5.07e-01 | 86.4% | 81.5% |
| 5064459 | 2008.1.1.59 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_1 | 0.69 | 58.0 | 5.31e-01 | 86.4% | 80.9% |
| 3555330 | 2008.1.1.97 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Exo5 | 0.69 | 58.0 | 4.83e-01 | 86.9% | 82.5% |
| 3936120 | 2008.1.1.27 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › RAI1 | 0.65 | 59.0 | 4.76e-01 | 97.7% | 79.1% |
| 2985793 | 2008.1.1.4 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Cas_Cas4 | 0.65 | 54.0 | 5.02e-01 | 88.1% | 70.6% |
| 4062847 | 2008.1.1.18 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › eIF-3_zeta | 0.64 | 58.0 | 4.51e-01 | 97.2% | 82.1% |
| 3932439 | 2008.1.1.18 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › eIF-3_zeta | 0.64 | 57.0 | 4.50e-01 | 97.7% | 80.7% |
| 3225936 | 2008.1.1.27 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › RAI1 | 0.64 | 59.0 | 4.82e-01 | 99.4% | 81.2% |
| 3253903 | 2008.1.1.59 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_1 | 0.64 | 58.0 | 5.32e-01 | 94.9% | 90.0% |
| 3250545 | 2008.1.1.18 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › eIF-3_zeta | 0.64 | 57.0 | 4.52e-01 | 97.2% | 80.3% |
| 3599093 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.63 | 56.0 | 4.45e-01 | 97.2% | 82.1% |
| 3735828 | 2008.1.1.18 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › eIF-3_zeta | 0.63 | 56.0 | 4.33e-01 | 97.2% | 76.5% |
| 3230331 | 2008.1.1.27 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › RAI1 | 0.63 | 58.0 | 4.63e-01 | 97.7% | 83.6% |
| 3243708 | 2008.1.1.27 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › RAI1 | 0.63 | 57.0 | 4.59e-01 | 97.2% | 74.6% |
| 4024552 | 2008.1.1.18 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › eIF-3_zeta | 0.63 | 56.0 | 4.40e-01 | 97.2% | 82.4% |
| 3925198 | 2008.1.1.27 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › RAI1 | 0.63 | 58.0 | 4.61e-01 | 97.7% | 80.0% |
| 3213166 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.63 | 57.0 | 4.60e-01 | 97.7% | 81.5% |
| 3310614 | 2008.1.1.146 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › EDRF1_N | 0.62 | 56.0 | 4.55e-01 | 97.7% | 78.2% |
| 4991290 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.62 | 56.0 | 4.83e-01 | 94.3% | 88.1% |
| 3592513 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.62 | 57.0 | 4.54e-01 | 99.4% | 77.4% |
| 3393164 | 2008.1.1.91 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › NARG2_C | 0.62 | 56.0 | 4.32e-01 | 97.7% | 69.8% |
| 3883797 | 2008.1.1.146 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › EDRF1_N | 0.62 | 56.0 | 4.58e-01 | 97.7% | 84.4% |
| 3972352 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.61 | 50.0 | 4.08e-01 | 86.4% | 66.6% |
| 3710451 | 2008.1.1.27 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › RAI1 | 0.61 | 55.0 | 4.45e-01 | 99.4% | 78.5% |
| 3607869 | 2008.1.1.146 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › EDRF1_N | 0.60 | 55.0 | 4.60e-01 | 100.0% | 81.0% |
| 4992664 | 5104.1.1.0 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases | 0.60 | 31.0 | 3.38e-01 | 84.7% | 57.9% |
| 3415033 | 2008.1.1.27 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › RAI1 | 0.60 | 53.0 | 4.23e-01 | 97.7% | 75.8% |
| 3277954 | 2008.1.1.67 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › RecC_C | 0.59 | 49.0 | 3.95e-01 | 86.4% | 59.4% |
| 3939159 | 2008.1.1.91 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › NARG2_C | 0.59 | 53.0 | 4.29e-01 | 98.3% | 71.0% |
| 3628154 | 2008.1.1.91 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › NARG2_C | 0.57 | 52.0 | 4.27e-01 | 98.9% | 72.0% |
| 3486967 | 5104.1.1.0 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases | 0.57 | 31.0 | 3.38e-01 | 84.7% | 62.0% |
| 3477161 | 5104.1.1.3 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA2 | 0.57 | 31.0 | 3.38e-01 | 84.7% | 62.0% |
| 3276755 | 2008.1.1.91 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › NARG2_C | 0.57 | 51.0 | 4.03e-01 | 99.4% | 57.9% |
| 3479948 | 2008.1.1.91 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › NARG2_C | 0.56 | 50.0 | 4.32e-01 | 98.3% | 74.8% |
| 3238589 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.55 | 50.0 | 3.98e-01 | 99.4% | 71.3% |
| 3182274 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.54 | 47.0 | 4.31e-01 | 93.8% | 75.9% |
| 4468299 | 327.4.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › YhbC-like, N-terminal domain › YhbC-like, N-terminal domain › RimP_N | 0.51 | 26.0 | 3.52e-01 | 85.2% | 100.0% |