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hypothetical_protein_MPVG_00213

Euk-Vir

Micromonas_pusilla_virus_12T

hypothetical_protein_MPVG_00213__YP_007676277__Micromonas_pusilla_virus_12T__755272

Identity

Accession:
YP_007676277 ↗
Protein ID:
hypothetical_protein_MPVG_00213
Kingdom:
euk

Quality

77.8 mean pLDDT

Taxonomy

Bamfordvirae› Nucleocytoviricota› Megaviricetes› Algavirales› Phycodnaviridae› Prasinovirus› Micromonas_pusilla_virus_12T

TaxID: 755272

Cluster

View cluster (17 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 44-98
PDB
D2 medium residues 99-171
PDB
Domain cluster: representative
CATH (18)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1t98A02 1.20.58.590 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Chromosome partition protein MukF, middle domain 0.75 55.0 4.20e-01 89.0% 35.0%
1v64A00 1.10.30.10 Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › High mobility group box domain 0.73 56.0 4.92e-01 82.2% 63.9%
3h4cA01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.68 41.0 3.69e-01 72.6% 45.8%
2kqzA01 1.10.2020.20 Mainly Alpha › Orthogonal Bundle › uronate isomerase, domain 2, chain A › 0.67 46.0 3.89e-01 72.6% 67.5%
1v63A00 1.10.30.10 Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › High mobility group box domain 0.65 49.0 4.45e-01 82.2% 72.3%
3wvoC02 1.10.132.100 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › 0.64 53.0 4.35e-01 89.0% 72.3%
2zs0A00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.64 44.0 3.57e-01 72.6% 42.9%
4k0dA00 1.20.120.1730 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.64 55.0 4.48e-01 98.6% 79.7%
3h1qA02 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.63 44.0 3.79e-01 72.6% 65.2%
3lxrF00 1.10.4120.20 Mainly Alpha › Orthogonal Bundle › SopE-like GEF fold › 0.62 39.0 2.97e-01 79.5% 26.0%
1zv1A00 1.10.8.10 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain 0.61 38.0 4.18e-01 76.7% 78.0%
5t3wA00 1.20.120.1160 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.61 48.0 3.90e-01 84.9% 82.5%
5z4zC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 46.0 4.33e-01 80.8% 88.6%
1a00B00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.60 44.0 3.49e-01 76.7% 41.8%
1cg5B00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.58 41.0 3.36e-01 75.3% 40.4%
1s7oB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 42.0 3.81e-01 82.2% 84.8%
2l22A01 1.10.1200.10 Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › ACP-like 0.55 43.0 4.09e-01 87.7% 98.9%
1v9mA03 1.20.1690.10 Mainly Alpha › Up-down Bundle › V-type ATP synthase subunit C fold › V-type ATP synthase subunit C domain 0.53 39.0 3.61e-01 78.1% 93.8%
ECOD (14)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3831795 589.1.2.1 ↗ alpha arrays › Triger factor/SurA peptide-binding domain-like › Triger factor/SurA peptide-binding domain-like › TF C-terminus (Pfam 05698) › Trigger_C 0.76 48.0 3.37e-01 82.2% 22.9%
4098538 589.1.2.1 ↗ alpha arrays › Triger factor/SurA peptide-binding domain-like › Triger factor/SurA peptide-binding domain-like › TF C-terminus (Pfam 05698) › Trigger_C 0.76 55.0 4.06e-01 79.5% 30.3%
3212195 622.4.1.0 ↗ alpha bundles › YvfG-like › Mite allergen Der p 5-related › Mite allergen Der p 5-related 0.71 60.0 5.30e-01 95.9% 62.7%
3506639 5050.1.1.9 ↗ alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 0.71 59.0 4.17e-01 94.5% 85.5%
4371015 589.1.2.1 ↗ alpha arrays › Triger factor/SurA peptide-binding domain-like › Triger factor/SurA peptide-binding domain-like › TF C-terminus (Pfam 05698) › Trigger_C 0.70 61.0 4.23e-01 95.9% 30.0%
3597736 192.29.1.0 ↗ alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) 0.70 52.0 4.93e-01 78.1% 68.2%
3216411 4009.1.1.23 ↗ alpha bundles › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins › C_tripleX 0.68 45.0 4.32e-01 87.7% 58.8%
3748535 304.9.1.1 ↗ a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 0.67 53.0 3.94e-01 86.3% 83.2%
3978726 284.1.1.7 ↗ a+b two layers › FKBP-like › FKBP-like › FKBP-like › Rotamase_2 0.67 48.0 3.91e-01 89.0% 39.3%
4937754 2005.1.1.0 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains 0.62 43.0 2.80e-01 71.2% 27.5%
4034211 632.19.1.3 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Choline binding protein A › Choline binding protein A › DUF1542 0.60 52.0 4.32e-01 94.5% 73.6%
4140444 101.1.1.26 ↗ alpha arrays › HTH › HTH › Three-helical HTH › UPF0122 0.60 47.0 4.20e-01 87.7% 83.6%
4931685 101.1.2.21 ↗ alpha arrays › HTH › HTH › winged helix domain › Fe_dep_repress 0.55 47.0 3.77e-01 93.2% 90.7%
3387446 7579.1.1.60 ↗ a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › DUF2920 0.51 36.0 2.28e-01 74.0% 35.8%