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hypothetical_protein_MRV_0019

Euk-Vir

Murine_roseolovirus

hypothetical_protein_MRV_0019__YP_009344846__Murine_roseolovirus__1940555

Identity

Accession:
YP_009344846 ↗
Protein ID:
hypothetical_protein_MRV_0019
Kingdom:
euk

Quality

74.6 mean pLDDT

Taxonomy

Heunggongvirae› Peploviricota› Herviviricetes› Herpesvirales› Orthoherpesviridae› Roseolovirus› Murine_roseolovirus

TaxID: 1940555

Cluster

View cluster (80 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 25-155
PDB
Domain cluster: rep: protein_U95__YP_073826__Human_betaherpesvirus_7__10372__D619-769
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF02393.22 best US22 51.2 1.90e-13 88.5% 91.9%
CATH (6)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4q1vA01 2.140.10.30 Mainly Beta › 8 Propeller › Methanol Dehydrogenase; Chain A › Dipeptidylpeptidase IV, N-terminal domain 0.55 42.0 2.89e-01 80.9% 23.7%
2nvnA00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.53 29.0 3.06e-01 94.7% 55.8%
2d4rA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.52 39.0 3.81e-01 100.0% 71.9%
3tfzB00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.52 40.0 3.74e-01 100.0% 66.1%
3v0rA01 2.40.350.20 Mainly Beta › Beta Barrel › AOC barrel-like › 0.51 40.0 4.20e-01 97.7% 90.8%
4i8oA02 3.30.160.690 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Bacterial toxin RNase RnlA/LsoA, N repeated domain 0.51 28.0 3.34e-01 93.9% 77.8%
ECOD (10)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4292366 9.1.1.14 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › CpeS 0.55 44.0 4.03e-01 88.5% 86.4%
3899338 6.1.1.3 ↗ beta duplicates or obligate multimers › beta-Trefoil › beta-Trefoil › beta-Trefoil › IL1 0.55 39.0 3.64e-01 73.3% 97.0%
3273196 223.2.1.1 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › Profilin 0.55 36.0 3.45e-01 84.0% 57.3%
3185947 5.1.4.271 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, PF30361 0.53 47.0 3.22e-01 99.2% 89.1%
5792 295.1.1.6 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › DUF1818 0.53 29.0 3.05e-01 94.7% 55.4%
3785324 9.3.1.0 ↗ beta barrels › Lipocalins/Streptavidin › Quinohemoprotein amine dehydrogenase A chain, domain 3-like › Quinohemoprotein amine dehydrogenase A chain, domain 3-like 0.52 44.0 3.62e-01 93.9% 83.0%
3175625 9.3.1.0 ↗ beta barrels › Lipocalins/Streptavidin › Quinohemoprotein amine dehydrogenase A chain, domain 3-like › Quinohemoprotein amine dehydrogenase A chain, domain 3-like 0.51 43.0 3.88e-01 93.9% 83.4%
4960303 9.1.1.0 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.51 33.0 3.67e-01 97.7% 87.4%
2031933 6.1.1.3 ↗ beta duplicates or obligate multimers › beta-Trefoil › beta-Trefoil › beta-Trefoil › IL1 0.51 39.0 3.74e-01 81.7% 87.9%
4557459 6.1.1.3 ↗ beta duplicates or obligate multimers › beta-Trefoil › beta-Trefoil › beta-Trefoil › IL1 0.51 36.0 3.40e-01 74.0% 78.2%
D2 high residues 191-309
PDB
Domain cluster: rep: US22_family_homolog__YP_214036__Murid_betaherpesvirus_1__10366__D272-375
CATH (16)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1zxuA00 2.40.160.200 Mainly Beta › Beta Barrel › Porin › LURP1-related 0.60 39.0 3.53e-01 90.8% 48.1%
3ottB02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.60 41.0 3.03e-01 71.4% 54.1%
2p4oA01 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.59 41.0 3.05e-01 70.6% 57.2%
2b5uA03 3.10.380.10 Alpha Beta › Roll › Ribonuclease domain of colicin e3 (Residues 456-551) › Colicin E3-like ribonuclease domain 0.59 37.0 4.02e-01 73.1% 75.5%
2qe8A00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.58 44.0 3.19e-01 79.0% 64.4%
3ffvA00 3.40.1580.20 Alpha Beta › 3-Layer(aba) Sandwich › SMI1/KNR4-like › Syd protein 0.57 42.0 3.62e-01 76.5% 50.3%
1mdaH00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.55 41.0 2.94e-01 78.2% 85.6%
5gtqA00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.53 41.0 3.09e-01 83.2% 57.7%
2b5nB00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.53 41.0 3.04e-01 83.2% 67.0%
4aezA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.53 41.0 3.01e-01 83.2% 73.6%
2xn1A01 2.70.98.60 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › alpha-galactosidase from lactobacil brevis 0.52 47.0 3.49e-01 100.0% 82.3%
2it1A03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.52 26.0 3.28e-01 80.7% 86.9%
1npeA00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.51 37.0 2.85e-01 74.8% 97.7%
2fblB00 2.40.320.10 Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 0.50 35.0 3.32e-01 72.3% 85.8%
1q47A00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.50 45.0 3.01e-01 100.0% 68.8%
4kwyA00 3.30.160.150 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Lipoprotein like domain 0.50 37.0 3.60e-01 78.2% 97.8%
ECOD (38)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4948153 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.66 35.0 4.34e-01 93.3% 85.7%
3838634 4205.1.1.3 ↗ a+b two layers › SMI1/KNR4-like › SMI1/KNR4-like › SMI1/KNR4-like › SMI1_KNR4 0.65 46.0 4.54e-01 75.6% 68.0%
3789432 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.65 45.0 2.96e-01 70.6% 40.8%
3260943 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.64 35.0 4.47e-01 70.6% 91.4%
3924523 844.1.1.0 ↗ beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain 0.62 48.0 3.96e-01 81.5% 60.5%
3260659 5.1.5.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 0.60 41.0 2.84e-01 71.4% 41.9%
3464481 5.1.3.142 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Beta-prop_AT5G49610-like 0.59 45.0 3.14e-01 79.0% 82.4%
3605776 5.1.5.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.59 43.0 2.86e-01 74.8% 67.4%
3759926 5.1.8.9 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › putative conserved lipoprotein NT01CX_1156 › Kelch_1 0.59 41.0 3.91e-01 70.6% 88.9%
3284638 4205.1.1.3 ↗ a+b two layers › SMI1/KNR4-like › SMI1/KNR4-like › SMI1/KNR4-like › SMI1_KNR4 0.59 42.0 3.93e-01 78.2% 60.7%
3794752 5.1.3.222 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Beta-prop_LRRK2 0.58 45.0 3.06e-01 80.7% 74.5%
3305683 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.57 40.0 2.84e-01 71.4% 52.1%
3239485 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.57 34.0 3.32e-01 75.6% 53.1%
3938022 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.57 45.0 3.13e-01 82.4% 75.5%
3423257 5.1.3.142 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Beta-prop_AT5G49610-like 0.57 43.0 3.07e-01 79.8% 79.7%
3670446 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.57 43.0 3.16e-01 79.8% 88.4%
3467472 5.1.5.146 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › Beta-prop_AT5G49610-like 0.57 43.0 3.19e-01 79.0% 81.7%
3222419 331.23.1.0 ↗ a+b two layers › TBP-like › Integrator IntS9/IntS11 C-terminal domain › Integrator IntS9/IntS11 C-terminal domain 0.56 29.0 3.57e-01 80.7% 78.7%
3672663 5.1.3.142 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Beta-prop_AT5G49610-like 0.55 41.0 3.05e-01 79.0% 81.2%
3273270 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.55 39.0 3.08e-01 73.9% 50.2%
4030034 109.4.1.1140 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_PEP5_VPS11 0.55 39.0 2.60e-01 73.9% 33.1%
3689743 844.1.1.0 ↗ beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain 0.55 40.0 3.51e-01 76.5% 85.6%
3434838 5.1.3.67 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 0.54 39.0 2.87e-01 73.9% 98.1%
3812754 5.1.3.67 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 0.54 42.0 3.37e-01 81.5% 85.2%
3920678 5.1.5.41 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40_2 0.54 38.0 2.78e-01 73.1% 48.6%
3905352 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.54 40.0 2.63e-01 79.0% 55.4%
3448363 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.54 40.0 3.22e-01 77.3% 65.7%
3190113 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.54 42.0 3.13e-01 83.2% 57.7%
3448058 5.1.3.118 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 0.53 44.0 3.20e-01 89.9% 84.3%
4283257 243.3.1.52 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › UPF0182 0.53 40.0 2.91e-01 78.2% 99.7%
3433410 5.1.3.144 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › b-prop_At3g26010-like 0.52 38.0 2.87e-01 75.6% 86.4%
3419193 5.1.3.118 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 0.52 41.0 3.41e-01 83.2% 82.4%
3962065 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.52 40.0 3.12e-01 80.7% 98.4%
3927304 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.52 41.0 2.85e-01 84.0% 43.9%
3830535 5.1.3.67 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 0.52 37.0 2.85e-01 74.8% 97.2%
4672378 71.1.1.1 ↗ beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Ependymin 0.51 37.0 3.18e-01 74.8% 60.0%
3903931 5.1.3.6 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_1 0.50 40.0 2.93e-01 84.0% 62.4%
4938517 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.50 38.0 2.86e-01 80.7% 39.3%