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hypothetical_protein_MRV_0079

Euk-Vir

Murine_roseolovirus

hypothetical_protein_MRV_0079__YP_009344906__Murine_roseolovirus__1940555

Identity

Accession:: YP_009344906 ↗
Protein ID:: hypothetical_protein_MRV_0079
Kingdom:: euk

Quality

89.2 mean pLDDT

Taxonomy

Heunggongvirae› Peploviricota› Herviviricetes› Herpesvirales› Orthoherpesviridae› Roseolovirus› Murine_roseolovirus

TaxID: 1940555

Cluster

View cluster (21 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-127

PDB

Domain cluster: rep: tegument_protein_UL88__YP_002608280__Human_herpesvirus_5__10359__D21-114_139-191

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF04529.18 best	Herpes_U59	93.4	2.30e-26	96.0%	31.8%

CATH (2)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4l9cA00	3.40.1000.30	Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A ›	0.53	41.0	3.86e-01	94.4%	67.3%
4r80A00	3.10.450.630	Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, ›	0.52	27.0	3.26e-01	82.4%	77.6%

ECOD (6)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1489668	3936.1.1.1 ↗	a+b complex topology › Herpesvirus UL21 N-terminal domain › Herpesvirus UL21 N-terminal domain › Herpesvirus UL21 N-terminal domain › Herpes_UL21	0.78	72.0	6.23e-01	100.0%	87.2%
3483268	4184.1.1.0 ↗	beta barrels › MFPT repeat › MFPT repeat › MFPT repeat	0.58	29.0	3.57e-01	72.8%	77.3%
3953439	375.1.1.0 ↗	few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related	0.54	31.0	3.94e-01	84.0%	98.6%
3394670	389.1.2.1 ↗	few secondary structure elements › EGF-like › EGF-related › Complement control module/SCR domain › Sushi	0.52	29.0	3.56e-01	92.0%	92.9%
4146808	222.2.1.1 ↗	a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Insertion domain in thioesterase › Insertion domain in thioesterase › FAS1_thioest_ins	0.52	35.0	3.90e-01	100.0%	86.0%
3168711	227.1.1.0 ↗	a+b two layers › DNA clamp › DNA clamp › DNA clamp	0.52	33.0	3.05e-01	96.8%	48.2%

D2 high residues 154-242

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF04529.18 best	Herpes_U59	37.6	2.00e-09	100.0%	24.9%

CATH (9)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3cexA00	1.20.120.450	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › dinb family like domain	0.59	46.0	3.75e-01	83.1%	91.2%
4c0kA01	1.10.238.10	Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand	0.58	44.0	4.31e-01	84.3%	93.1%
1pwuA04	3.40.390.10	Alpha Beta › 3-Layer(aba) Sandwich › Collagenase (Catalytic Domain) › Collagenase (Catalytic Domain)	0.56	43.0	3.29e-01	83.1%	72.4%
1bxiA00	1.10.1200.20	Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › Colicin E immunity protein	0.56	38.0	3.96e-01	71.9%	89.2%
2dbhA01	1.10.533.10	Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas	0.55	41.0	4.34e-01	80.9%	100.0%
2pgsA02	1.10.3550.10	Mainly Alpha › Orthogonal Bundle › eoxyguanosinetriphosphate triphosphohydrolase fold › eoxyguanosinetriphosphate triphosphohydrolase domain-like	0.52	37.0	3.41e-01	74.2%	89.9%
4usaA02	1.10.150.120	Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › [2Fe-2S]-binding domain	0.52	43.0	3.95e-01	92.1%	93.3%
2olpA00	1.10.490.10	Mainly Alpha › Orthogonal Bundle › Globin-like › Globins	0.52	43.0	3.64e-01	92.1%	69.5%
1ze0A02	1.10.4070.10	Mainly Alpha › Orthogonal Bundle › putative redox-enzyme maturation protein fold › putative redox-enzyme maturation protein domain	0.50	37.0	3.86e-01	79.8%	91.0%

ECOD (12)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3376781	4156.1.1.4 ↗	alpha arrays › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › HA2_C	0.59	46.0	3.57e-01	86.5%	52.1%
3925770	4156.1.1.1 ↗	alpha arrays › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Sec63	0.56	45.0	4.13e-01	89.9%	84.2%
3679397	4156.1.1.1 ↗	alpha arrays › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Sec63	0.55	44.0	3.83e-01	89.9%	70.3%
4604080	518.1.1.1 ↗	alpha arrays › Chemotaxis receptor methyltransferase CheR, N-terminal domain › Chemotaxis receptor methyltransferase CheR, N-terminal domain › Chemotaxis receptor methyltransferase CheR, N-terminal domain › CheR_N	0.55	33.0	3.76e-01	79.8%	83.1%
3878076	197.1.1.1 ↗	alpha bundles › Acyl-CoA binding protein-like › Acyl-CoA binding protein-like › Acyl-CoA binding protein-like › FERM_M	0.54	41.0	3.83e-01	83.1%	90.4%
4676854	179.1.1.1 ↗	alpha bundles › CO dehydrogenase ISP C-domain like › CO dehydrogenase ISP C-domain like › CO dehydrogenase ISP C-domain like › Fer2_2	0.53	43.0	4.03e-01	92.1%	96.5%
4426361	110.1.1.16 ↗	alpha arrays › DEATH domain › DEATH domain › DEATH domain › SH3BP4_C	0.52	41.0	3.66e-01	85.4%	73.8%
3600496	213.1.1.0 ↗	a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat)	0.52	43.0	2.95e-01	96.6%	43.6%
3272274	130.1.1.0 ↗	alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif	0.52	42.0	3.37e-01	91.0%	52.1%
3702112	101.1.1.0 ↗	alpha arrays › HTH › HTH › Three-helical HTH	0.52	38.0	3.83e-01	89.9%	76.6%
3573723	5.1.4.37 ↗	beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Nup160	0.50	38.0	2.37e-01	80.9%	17.5%
3540239	110.1.1.0 ↗	alpha arrays › DEATH domain › DEATH domain › DEATH domain	0.50	40.0	3.84e-01	87.6%	81.9%

D3 high residues 245-334

PDB

Domain cluster: rep: E88__YP_007016485__Murid_betaherpesvirus_8__1261657__D330-411

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF04529.18 best	Herpes_U59	51.6	1.10e-13	100.0%	25.2%

CATH (9)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2ejsA00	1.10.8.10	Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain	0.63	31.0	3.72e-01	81.1%	70.7%
2gruA02	1.20.1090.10	Mainly Alpha › Up-down Bundle › Dehydroquinate synthase-like, alpha domain › Dehydroquinate synthase-like - alpha domain	0.58	44.0	3.56e-01	85.6%	97.5%
3lcnB00	1.10.340.40	Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › Nuclear abundant poly(A) RNA-bind protein 2, N-terminal domain	0.57	43.0	4.29e-01	83.3%	92.8%
5hfiA00	3.40.30.10	Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin	0.54	47.0	3.58e-01	100.0%	42.1%
2yviA00	1.10.533.10	Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas	0.54	43.0	4.36e-01	88.9%	93.3%
4nooB00	1.10.8.1160	Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 ›	0.52	39.0	3.89e-01	83.3%	75.8%
5gmkZ01	1.25.40.180	Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat ›	0.52	37.0	2.81e-01	75.6%	65.9%
4i6vA02	1.10.2020.10	Mainly Alpha › Orthogonal Bundle › uronate isomerase, domain 2, chain A › uronate isomerase, domain 2, chain A	0.51	32.0	3.34e-01	87.8%	67.9%
2xi9A03	1.10.150.480	Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 ›	0.51	35.0	3.38e-01	70.0%	70.3%

ECOD (13)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3454325	148.1.3.0 ↗	alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain	0.69	35.0	3.81e-01	83.3%	57.3%
3370653	103.1.1.0 ↗	alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain	0.65	32.0	3.98e-01	75.6%	76.4%
5042632	148.1.3.0 ↗	alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain	0.65	36.0	3.94e-01	81.1%	65.3%
3387189	5059.1.1.1 ↗	alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › EamA	0.61	43.0	3.01e-01	74.4%	92.1%
4014891	148.1.3.0 ↗	alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain	0.60	35.0	3.43e-01	82.2%	53.7%
3695484	148.1.3.212 ↗	alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_13	0.59	34.0	3.20e-01	81.1%	46.4%
4932585	148.1.3.50 ↗	alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › Cdc6_lid	0.57	34.0	3.66e-01	81.1%	69.3%
5074109	3787.2.1.0 ↗	alpha bundles › HAD superfamily helical bundle insertion domain	0.55	38.0	2.97e-01	72.2%	63.5%
1103981	6001.1.1.1 ↗	alpha arrays › Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) C-terminal domain › Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) C-terminal domain › Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) C-terminal domain › Peptidase_C30	0.54	44.0	4.00e-01	90.0%	81.3%
5082617	2003.1.1.49 ↗	a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Malic_M	0.53	37.0	3.01e-01	73.3%	52.0%
3491512	4156.1.1.4 ↗	alpha arrays › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › HA2_C	0.52	45.0	3.77e-01	94.4%	67.7%
3400531	197.1.1.1 ↗	alpha bundles › Acyl-CoA binding protein-like › Acyl-CoA binding protein-like › Acyl-CoA binding protein-like › FERM_M	0.52	40.0	3.69e-01	83.3%	89.2%
3174047	195.1.1.0 ↗	alpha complex topology › NusB-like › NusB-like › NusB-like	0.51	41.0	3.74e-01	88.9%	99.2%