←Back to structures
hypothetical_protein_MYSEV_255
Euk-VirMythimna_separata_entomopoxvirus_L
hypothetical_protein_MYSEV_255__YP_008003772__Mythimna_separata_entomopoxvirus_L__1293572
Identity
- Accession:
- YP_008003772 ↗
- Protein ID:
- hypothetical_protein_MYSEV_255
- Kingdom:
- euk
Quality
74.2
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Pokkesviricetes›
Chitovirales›
Poxviridae›
Betaentomopoxvirus›
Mythimna_separata_entomopoxvirus_'L'
TaxID: 1293572
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 16-67
Domain cluster:
representative
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3p2aA01 | 2.30.30.380 | Mainly Beta › Roll › SH3 type barrels. › Zn-finger domain of Sec23/24 | 0.72 | 45.0 | 5.17e-01 | 76.9% | 91.7% |
| 6nw1A00 | 2.20.28.10 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › | 0.60 | 44.0 | 4.68e-01 | 80.8% | 93.3% |
| 4l3uA00 | 1.20.1480.40 | Mainly Alpha › Up-down Bundle › hypothetical protein mp506/mpn330, domain 1 › Uncharacterised protein PF16133, DUF4844 | 0.56 | 43.0 | 3.37e-01 | 88.5% | 91.1% |
| 2vl6A03 | 2.20.28.10 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › | 0.56 | 41.0 | 4.19e-01 | 80.8% | 87.5% |
| 7lb8B02 | 1.10.3470.10 | Mainly Alpha › Orthogonal Bundle › ABC transporter involved in vitamin B12 uptake, BtuC › ABC transporter involved in vitamin B12 uptake, BtuC | 0.54 | 38.0 | 2.46e-01 | 76.9% | 66.5% |
| 4i1mB02 | 1.25.40.830 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.53 | 43.0 | 3.20e-01 | 96.2% | 34.0% |
| 1x6hA00 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.51 | 28.0 | 2.44e-01 | 71.2% | 30.2% |
ECOD (18)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3816792 | 376.1.6.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › IBR domain › IBR | 0.69 | 52.0 | 4.73e-01 | 82.7% | 74.3% |
| 3241153 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.67 | 54.0 | 3.88e-01 | 92.3% | 30.6% |
| 3732556 | 376.1.1.16 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › FANCL_C | 0.66 | 53.0 | 4.64e-01 | 94.2% | 63.5% |
| 3261587 | 376.1.1.20 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_UBOX | 0.65 | 46.0 | 4.15e-01 | 82.7% | 53.3% |
| 4025222 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.65 | 52.0 | 4.41e-01 | 96.2% | 53.3% |
| 3782681 | 376.1.1.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 | 0.64 | 53.0 | 4.30e-01 | 98.1% | 62.7% |
| 3841616 | 376.1.1.22 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_3 | 0.63 | 45.0 | 4.20e-01 | 80.8% | 59.4% |
| 3473113 | 386.1.1.1 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2 | 0.63 | 34.0 | 2.81e-01 | 71.2% | 29.0% |
| 3534266 | 386.1.1.24 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2_4 | 0.58 | 31.0 | 3.68e-01 | 71.2% | 86.7% |
| 3561635 | 386.1.1.1 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2 | 0.57 | 30.0 | 3.03e-01 | 71.2% | 45.5% |
| 3395756 | 386.1.1.133 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2+zf-C2H2_4 | 0.55 | 30.0 | 2.66e-01 | 71.2% | 33.3% |
| 3251560 | 4.1.1.355 ↗ | beta barrels › SH3 › SH3 › SH3 › WAC_Acf1_DNA_bd | 0.54 | 29.0 | 2.93e-01 | 80.8% | 49.1% |
| 3921776 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.54 | 30.0 | 2.90e-01 | 71.2% | 45.0% |
| 3452513 | 386.1.1.209 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › WAC_Acf1_DNA_bd | 0.52 | 27.0 | 2.74e-01 | 71.2% | 45.5% |
| 4977335 | 604.12.1.139 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › DUF1844 | 0.51 | 39.0 | 3.49e-01 | 90.4% | 92.8% |
| 4861007 | 3819.1.1.2 ↗ | alpha complex topology › CRISPR-associated endonuclease Cas9 alpha-helical lobe › CRISPR-associated endonuclease Cas9 alpha-helical lobe › CRISPR-associated endonuclease Cas9 alpha-helical lobe | 0.51 | 41.0 | 2.75e-01 | 100.0% | 88.8% |
| 3750062 | 857.1.1.26 ↗ | a+b duplicates or obligate multimers › Cell division protein ZapA-like › Cell division protein ZapA-like › Cell division protein ZapA-like › Dzip-like_N | 0.51 | 34.0 | 3.03e-01 | 71.2% | 68.2% |
| 3560879 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.51 | 39.0 | 3.22e-01 | 100.0% | 72.0% |