hypothetical_protein_McnAVgp073

Euk-Vir

Mamestra_configurata_nucleopolyhedrovirus_A

hypothetical_protein_McnAVgp073__NP_613156__Mamestra_configurata_nucleopolyhedrovirus_A__207830

Identity

85.3 mean pLDDT

Naldaviricetes› Lefavirales› Baculoviridae› Alphabaculovirus› Mamestra_configurata_nucleopolyhedrovirus_A

TaxID: 207830

View cluster (16 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 1-68

PDB

Domain cluster: rep: hypothetical_protein_AGNV_164__YP_009316174__Anticarsia_gemmatalis_multiple_nucleopolyhedrovirus__268591__D4-68

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF03804.20 best	DUF325	65.6	5.50e-18	98.5%	46.0%

D2 high residues 75-155

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF03804.20 best	DUF325	69.8	2.80e-19	80.2%	46.7%

CATH (2)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1twfL00	2.20.28.30	Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › RNA polymerase ii, chain L	0.63	30.0	3.74e-01	76.5%	76.1%
1odmA00	2.60.120.330	Mainly Beta › Sandwich › Jelly Rolls › B-lactam Antibiotic, Isopenicillin N Synthase; Chain	0.57	46.0	3.07e-01	87.7%	45.9%

ECOD (4)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3688228	223.1.1.0 ↗	a+b three layers › Profilin-like › sensor domains › sensor domains	0.59	48.0	3.52e-01	86.4%	97.1%
3940284	109.4.1.0 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat	0.57	41.0	2.43e-01	86.4%	8.7%
3720664	375.1.1.0 ↗	few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related	0.51	31.0	3.20e-01	79.0%	63.5%
4405845	375.10.1.3 ↗	few secondary structure elements › Rubredoxin-like › Zinc finger domain of DNA polymerase-alpha › Zinc finger domain of DNA polymerase-alpha › zf_DPOE_2	0.50	35.0	3.97e-01	86.4%	96.7%