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hypothetical_protein_McnAVgp163
Euk-VirMamestra_configurata_nucleopolyhedrovirus_A
hypothetical_protein_McnAVgp163__NP_613246__Mamestra_configurata_nucleopolyhedrovirus_A__207830
Identity
- Accession:
- NP_613246 ↗
- Protein ID:
- hypothetical_protein_McnAVgp163
- Kingdom:
- euk
Quality
85.1
mean pLDDT
Taxonomy
Naldaviricetes›
Lefavirales›
Baculoviridae›
Alphabaculovirus›
Mamestra_configurata_nucleopolyhedrovirus_A
TaxID: 207830
Cluster
View cluster (42 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 11-59_86-121_147-179
Domain cluster:
rep: hypothetical_protein__YP_008378364__Choristoneura_rosaceana_nucleopolyhedrovirus__58094__D1-36_82-107_149-191
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF05959.17 best | DUF884 | 45.2 | 1.10e-11 | 44.1% | 28.2% |
| PF05959.17 | DUF884 | 40.8 | 2.50e-10 | 31.4% | 18.6% |
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2l33A00 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.61 | 24.0 | 2.72e-01 | 84.7% | 45.1% |
| 4g5aA00 | 2.60.40.3080 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.60 | 31.0 | 3.38e-01 | 83.9% | 58.6% |
| 1oxxK02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.58 | 21.0 | 3.20e-01 | 82.2% | 80.0% |
| 6u7iB02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 30.0 | 3.39e-01 | 72.0% | 69.6% |
| 4q63A00 | 2.40.10.430 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.51 | 29.0 | 3.22e-01 | 82.2% | 68.8% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3164388 | 2.4.1.0 ↗ | beta barrels › OB-fold › MOP-like › MOP-like | 0.62 | 22.0 | 2.97e-01 | 81.4% | 56.9% |
| 5000515 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.58 | 28.0 | 3.14e-01 | 75.4% | 57.9% |
| 3963617 | 2.4.1.4 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › FbpC_C_terminal | 0.56 | 22.0 | 2.84e-01 | 81.4% | 58.5% |
| 4528719 | 4.1.1.438 ↗ | beta barrels › SH3 › SH3 › SH3 › PF27440 | 0.55 | 27.0 | 3.51e-01 | 91.5% | 84.6% |
| 4941200 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.54 | 31.0 | 3.01e-01 | 72.0% | 49.6% |
| 3409973 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.53 | 23.0 | 2.80e-01 | 72.9% | 60.0% |
| 4399538 | 264.2.1.0 ↗ | beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain | 0.52 | 27.0 | 2.87e-01 | 82.2% | 53.6% |
D2
medium
residues 60-85_122-146_180-191