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hypothetical_protein_MuHV1_gp120

Euk-Vir

Murid_betaherpesvirus_1

hypothetical_protein_MuHV1_gp120__YP_214129__Murid_betaherpesvirus_1__10366

Identity

Accession:
YP_214129 ↗
Protein ID:
hypothetical_protein_MuHV1_gp120
Kingdom:
euk

Quality

71.9 mean pLDDT

Taxonomy

Heunggongvirae› Peploviricota› Herviviricetes› Herpesvirales› Orthoherpesviridae› Muromegalovirus› Murid_betaherpesvirus_1

TaxID: 10366

Cluster

View cluster (80 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 61-232
PDB
Domain cluster: rep: protein_U95__YP_073826__Human_betaherpesvirus_7__10372__D619-769
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF02393.22 best US22 41.7 1.60e-10 74.4% 95.2%
CATH (7)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1s28A00 3.30.1460.10 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.54 38.0 4.29e-01 83.7% 94.6%
1yqfB00 3.10.280.10 Alpha Beta › Roll › Mitochondrial Matrix Protein; Chain A › Mitochondrial glycoprotein 0.54 30.0 3.07e-01 70.3% 51.4%
4gf3A00 3.30.1460.10 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.52 35.0 4.03e-01 82.0% 94.3%
1w1hD00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.51 32.0 3.57e-01 83.1% 78.8%
7wa9A01 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.51 35.0 3.82e-01 95.3% 85.8%
4fmrA02 4.10.520.10 Few Secondary Structures › Irregular › HU Protein; Chain A › IHF-like DNA-binding proteins 0.50 26.0 3.49e-01 93.6% 96.6%
3aabB00 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.50 25.0 3.13e-01 95.3% 75.5%
ECOD (1)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4057824 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.57 35.0 4.03e-01 87.2% 81.2%
D2 high residues 242-367
PDB
Domain cluster: rep: US22_family_homolog__YP_214055__Murid_betaherpesvirus_1__10366__D433-537
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF02393.22 best US22 41.5 1.90e-10 79.4% 52.4%
CATH (15)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1z1bA01 3.30.160.60 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger 0.74 28.0 4.07e-01 79.4% 75.4%
4fr9A00 3.10.450.360 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.64 48.0 4.63e-01 77.0% 69.5%
7mhwA01 2.40.128.10 Mainly Beta › Beta Barrel › Lipocalin › 0.62 41.0 4.70e-01 84.9% 94.4%
4fw1A02 2.30.30.10 Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral 0.57 24.0 3.59e-01 82.5% 92.6%
2do3A01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.56 23.0 3.46e-01 77.0% 92.2%
6bhdA03 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.56 30.0 3.75e-01 83.3% 95.2%
3lkmA02 3.20.200.10 Alpha Beta › Alpha-Beta Barrel › Protein kinase-like fold › MHCK/EF2 kinase 0.54 27.0 3.11e-01 74.6% 63.3%
7pluA01 1.20.58.530 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.54 30.0 3.17e-01 88.1% 58.4%
3eo4D00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.53 40.0 3.71e-01 79.4% 90.7%
6yleA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.52 41.0 2.90e-01 84.9% 50.3%
3hrpA02 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.51 43.0 3.27e-01 92.1% 98.0%
3ijcA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.51 40.0 2.91e-01 84.9% 54.3%
1xipA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.51 44.0 3.24e-01 98.4% 61.0%
8f5pE01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.50 40.0 2.90e-01 86.5% 64.9%
3mmyA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.50 43.0 3.16e-01 95.2% 92.7%
ECOD (16)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3217467 5.1.4.311 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, Beta-prop_NUP159_NUP214 0.60 42.0 3.02e-01 71.4% 84.2%
3305160 5.1.5.185 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › Beta-prop_RIC1_2nd 0.55 48.0 2.93e-01 92.9% 49.3%
3594793 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.55 43.0 3.17e-01 81.7% 62.5%
3436651 5.1.3.118 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 0.53 43.0 3.12e-01 86.5% 96.6%
3209159 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.53 41.0 2.91e-01 83.3% 57.5%
3776090 5.1.4.290 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, Beta-prop_RIG_1st 0.52 42.0 3.02e-01 87.3% 65.0%
3995338 10.1.1.17 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 0.51 40.0 3.73e-01 96.8% 66.5%
3419181 5.1.3.144 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › b-prop_At3g26010-like 0.51 39.0 2.99e-01 80.2% 61.7%
3273903 4291.1.1.1 ↗ beta barrels › Oxysterol-binding protein › Oxysterol-binding protein › Oxysterol-binding protein › Oxysterol_BP 0.51 41.0 2.99e-01 86.5% 64.6%
3270212 4291.1.1.1 ↗ beta barrels › Oxysterol-binding protein › Oxysterol-binding protein › Oxysterol-binding protein › Oxysterol_BP 0.51 41.0 2.96e-01 85.7% 63.9%
3935890 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.51 44.0 3.26e-01 95.2% 97.6%
3214083 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.51 39.0 3.67e-01 96.8% 66.5%
3318787 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.50 39.0 2.80e-01 81.7% 56.8%
3464229 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.50 39.0 2.85e-01 83.3% 44.9%
3666904 5.1.3.142 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Beta-prop_AT5G49610-like 0.50 42.0 3.17e-01 92.1% 94.5%
3651664 4291.1.1.1 ↗ beta barrels › Oxysterol-binding protein › Oxysterol-binding protein › Oxysterol-binding protein › Oxysterol_BP 0.50 41.0 2.88e-01 85.7% 60.0%