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hypothetical_protein_Mvrk_gpp08
Euk-VirMaverick-related_virus_strain_Spezl
hypothetical_protein_Mvrk_gpp08__YP_004300286__Maverick-related_virus_strain_Spezl__1932931
Identity
- Accession:
- YP_004300286 ↗
- Protein ID:
- hypothetical_protein_Mvrk_gpp08
- Kingdom:
- euk
Quality
59.7
mean pLDDT
Taxonomy
Bamfordvirae›
Preplasmiviricota›
Virophaviricetes›
Lavidavirales›
Maviroviridae›
Mavirus›
Maverick-related_virus_strain_Spezl
TaxID: 1932931
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 3-68
D2
medium
residues 90-120
Domain cluster:
representative
CATH (37)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2bpoA04 | 3.40.50.80 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module | 0.99 | 89.0 | 5.44e-01 | 100.0% | 19.1% |
| 6wshA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.98 | 88.0 | 7.15e-01 | 100.0% | 56.4% |
| 2f4lA03 | 3.10.28.20 | Alpha Beta › Roll › Endonuclease I-creI › Acetamidase/Formamidase-like domains | 0.98 | 88.0 | 6.32e-01 | 100.0% | 38.7% |
| 2qtlA03 | 3.40.50.80 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module | 0.97 | 87.0 | 5.34e-01 | 100.0% | 20.0% |
| 1s8nA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.94 | 82.0 | 6.65e-01 | 100.0% | 53.4% |
| 1f20A01 | 3.40.50.80 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module | 0.94 | 82.0 | 5.06e-01 | 100.0% | 19.0% |
| 3w0lD01 | 1.10.8.1080 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.91 | 78.0 | 5.30e-01 | 100.0% | 29.7% |
| 1ctfA00 | 3.30.1390.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein L30; Chain: A, › Ribosomal protein L7/L12, C-terminal domain/Adaptor protein ClpS | 0.91 | 72.0 | 5.57e-01 | 96.8% | 41.2% |
| 3mc1A02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.89 | 63.0 | 4.89e-01 | 77.4% | 35.8% |
| 3dteA02 | 1.10.10.1030 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › IrrE, HTH domain | 0.87 | 67.0 | 6.21e-01 | 87.1% | 65.9% |
| 4ki9A00 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.87 | 76.0 | 4.76e-01 | 100.0% | 21.0% |
| 4d3pA00 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.84 | 71.0 | 4.58e-01 | 100.0% | 22.4% |
| 3r64A01 | 3.40.605.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 | 0.84 | 64.0 | 3.71e-01 | 96.8% | 9.8% |
| 3ousA00 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.84 | 66.0 | 5.04e-01 | 100.0% | 37.8% |
| 5cbgA00 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.84 | 67.0 | 4.77e-01 | 100.0% | 30.4% |
| 2i6jA00 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.83 | 70.0 | 4.42e-01 | 100.0% | 21.1% |
| 8h6qD01 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.83 | 72.0 | 4.05e-01 | 96.8% | 12.4% |
| 2l4eA00 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.82 | 64.0 | 5.41e-01 | 93.5% | 50.9% |
| 1zx3A01 | 1.10.287.1020 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › NE0241-like | 0.82 | 70.0 | 5.12e-01 | 100.0% | 37.6% |
| 1owfA00 | 4.10.520.10 | Few Secondary Structures › Irregular › HU Protein; Chain A › IHF-like DNA-binding proteins | 0.81 | 63.0 | 4.51e-01 | 100.0% | 30.2% |
| 3pqaB01 | 3.40.605.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 | 0.80 | 60.0 | 3.52e-01 | 96.8% | 10.3% |
| 5ekcF01 | 3.40.605.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 | 0.80 | 59.0 | 3.46e-01 | 96.8% | 9.6% |
| 1rykA00 | 1.10.1470.10 | Mainly Alpha › Orthogonal Bundle › Protein Yjbj; Chain: A; › YjbJ | 0.80 | 67.0 | 5.20e-01 | 100.0% | 85.5% |
| 2d6fC03 | 1.10.150.380 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › GatB domain, N-terminal subdomain | 0.79 | 61.0 | 5.29e-01 | 90.3% | 55.8% |
| 1j78A05 | 1.10.246.10 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › | 0.78 | 64.0 | 5.31e-01 | 100.0% | 53.3% |
| 4eeiA03 | 1.10.40.30 | Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase Protein R1; domain 1 › Fumarase/aspartase (C-terminal domain) | 0.76 | 61.0 | 4.73e-01 | 100.0% | 47.4% |
| 1ez0B01 | 3.40.605.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 | 0.75 | 61.0 | 3.51e-01 | 100.0% | 45.8% |
| 3kglB01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.72 | 52.0 | 3.14e-01 | 80.6% | 11.2% |
| 3fdjA01 | 3.40.50.10440 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Dihydroxyacetone kinase; domain 1 | 0.72 | 58.0 | 4.08e-01 | 100.0% | 27.5% |
| 3vokA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.71 | 57.0 | 3.56e-01 | 93.5% | 17.6% |
| 3urrA00 | 3.40.930.10 | Alpha Beta › 3-Layer(aba) Sandwich › Mannitol-specific EII; Chain A › Mannitol-specific EII; Chain A | 0.70 | 61.0 | 3.89e-01 | 100.0% | 54.6% |
| 1qusA01 | 1.10.8.350 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Bacterial muramidase | 0.70 | 60.0 | 4.13e-01 | 100.0% | 36.3% |
| 2qhoD00 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.70 | 54.0 | 4.84e-01 | 100.0% | 59.2% |
| 4om8A02 | 1.10.1040.10 | Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 | 0.68 | 52.0 | 3.58e-01 | 93.5% | 25.8% |
| 3c24A02 | 1.10.3640.10 | Mainly Alpha › Orthogonal Bundle › putative oxidoreductase fold › Semialdehyde dehydrogenase-like, C-terminal | 0.66 | 53.0 | 3.84e-01 | 100.0% | 98.0% |
| 4ap9A02 | 1.10.150.210 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Phosphoserine phosphatase; domain 2 | 0.62 | 46.0 | 3.73e-01 | 80.6% | 41.7% |
| 1rp5A03 | 3.30.70.2110 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.61 | 46.0 | 3.59e-01 | 96.8% | 40.0% |
ECOD (40)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3239909 | 7514.1.1.1 ↗ | a/b three-layered sandwiches › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › NAD_binding_1 | 0.99 | 90.0 | 5.44e-01 | 100.0% | 18.2% |
| 3640677 | 7514.1.1.1 ↗ | a/b three-layered sandwiches › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › NAD_binding_1 | 0.98 | 88.0 | 5.43e-01 | 100.0% | 20.3% |
| 3289310 | 103.12.1.1 ↗ | alpha arrays › RuvA-C › ANTAR domain › ANTAR domain › ANTAR | 0.96 | 81.0 | 6.60e-01 | 93.5% | 52.7% |
| 3589629 | 307.1.1.3 ↗ | a+b two layers › Hedgehog/DD-peptidase › Hedgehog/DD-peptidase › Hedgehog/DD-peptidase › VanY | 0.96 | 87.0 | 5.16e-01 | 100.0% | 15.6% |
| 3210445 | 3685.1.1.1 ↗ | a+b two layers › Putative acetamidase tm0119 C-terminal domain › Putative acetamidase tm0119 C-terminal domain › Putative acetamidase tm0119 C-terminal domain › FmdA_AmdA | 0.95 | 83.0 | 5.68e-01 | 100.0% | 31.3% |
| 5068460 | 7523.1.1.22 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › ABC2_membrane_3 | 0.94 | 82.0 | 5.11e-01 | 96.8% | 20.7% |
| 3690420 | 3685.1.1.1 ↗ | a+b two layers › Putative acetamidase tm0119 C-terminal domain › Putative acetamidase tm0119 C-terminal domain › Putative acetamidase tm0119 C-terminal domain › FmdA_AmdA | 0.94 | 81.0 | 5.75e-01 | 100.0% | 34.4% |
| 4024033 | 103.1.1.0 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain | 0.94 | 82.0 | 6.77e-01 | 100.0% | 56.4% |
| 3266945 | 103.12.1.0 ↗ | alpha arrays › RuvA-C › ANTAR domain › ANTAR domain | 0.94 | 82.0 | 6.35e-01 | 100.0% | 47.7% |
| 4996918 | 3685.1.1.1 ↗ | a+b two layers › Putative acetamidase tm0119 C-terminal domain › Putative acetamidase tm0119 C-terminal domain › Putative acetamidase tm0119 C-terminal domain › FmdA_AmdA | 0.93 | 80.0 | 5.89e-01 | 100.0% | 38.7% |
| 3601396 | 7514.1.1.0 ↗ | a/b three-layered sandwiches › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain | 0.93 | 80.0 | 4.80e-01 | 100.0% | 15.5% |
| 3612189 | 103.1.1.0 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain | 0.92 | 76.0 | 6.79e-01 | 96.8% | 66.7% |
| 3486637 | 4230.1.1.1 ↗ | alpha arrays › DnaD domain › DnaD domain › DnaD domain › DSPc | 0.91 | 82.0 | 6.31e-01 | 100.0% | 49.2% |
| 4142281 | 105.1.1.55 ↗ | alpha duplicates or obligate multimers › HLH-like › HLH, helix-loop-helix DNA-binding domain › HLH, helix-loop-helix DNA-binding domain › Latarcin | 0.90 | 75.0 | 5.35e-01 | 100.0% | 33.0% |
| 5012302 | 2006.1.1.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase | 0.88 | 72.0 | 4.33e-01 | 100.0% | 14.4% |
| 4973801 | 7523.1.1.22 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › ABC2_membrane_3 | 0.85 | 71.0 | 4.61e-01 | 96.8% | 22.2% |
| 3595001 | 103.1.1.0 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain | 0.85 | 70.0 | 6.29e-01 | 96.8% | 66.7% |
| 4936146 | 101.35.1.0 ↗ | alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX | 0.84 | 69.0 | 5.87e-01 | 100.0% | 56.4% |
| 3935879 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.84 | 70.0 | 4.30e-01 | 100.0% | 15.9% |
| 4102625 | 132.3.1.1 ↗ | alpha bundles › ACP-like › Hypothetical protein YjbJ › Hypothetical protein YjbJ › CsbD | 0.83 | 69.0 | 5.58e-01 | 96.8% | 91.7% |
| 4984680 | 3962.1.1.1 ↗ | alpha arrays › N-terminal helical domain in restriction-modification system methylation subunit-like › N-terminal helical domain in restriction-modification system methylation subunit › N-terminal helical domain in restriction-modification system methylation subunit › HsdM_N | 0.82 | 68.0 | 4.30e-01 | 100.0% | 18.2% |
| 3636418 | 2003.1.1.53 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › NmrA | 0.82 | 62.0 | 3.59e-01 | 87.1% | 9.2% |
| 4025313 | 3721.1.1.1 ↗ | alpha bundles › Protein regulator of cytokinesis 1 (PRC1) dimerization domain › Protein regulator of cytokinesis 1 (PRC1) dimerization domain › Protein regulator of cytokinesis 1 (PRC1) dimerization domain › VIT1 | 0.82 | 65.0 | 5.23e-01 | 100.0% | 44.3% |
| 3784553 | 592.1.1.6 ↗ | alpha arrays › PWI domain-like › PWI domain › PWI domain › Nab2 | 0.82 | 66.0 | 4.95e-01 | 100.0% | 37.6% |
| 5039496 | 101.1.2.914 ↗ | alpha arrays › HTH › HTH › winged helix domain › DUF6015 | 0.81 | 67.0 | 4.89e-01 | 100.0% | 55.6% |
| 3893 | 132.3.1.1 ↗ | alpha bundles › ACP-like › Hypothetical protein YjbJ › Hypothetical protein YjbJ › CsbD | 0.80 | 67.0 | 5.20e-01 | 100.0% | 85.5% |
| 4978574 | 230.1.1.5 ↗ | a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › GCHY-1 | 0.79 | 63.0 | 4.06e-01 | 100.0% | 18.8% |
| 2968637 | 1.1.2.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › RNA_pol_Rpb1_2 | 0.78 | 63.0 | 4.02e-01 | 100.0% | 32.9% |
| 3813815 | 103.1.1.0 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain | 0.77 | 59.0 | 5.07e-01 | 100.0% | 51.7% |
| 3799156 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.77 | 56.0 | 4.54e-01 | 100.0% | 39.2% |
| 3702846 | 308.1.1.1 ↗ | a+b two layers › ClpS-like › ClpS-related › ClpS-related › Ribosomal_L12 | 0.76 | 62.0 | 4.91e-01 | 100.0% | 45.7% |
| 3552352 | 198.1.1.0 ↗ | alpha arrays › Saposin-like › Saposin-like › Saposin-like | 0.72 | 60.0 | 4.50e-01 | 100.0% | 48.2% |
| 3923696 | 198.1.1.0 ↗ | alpha arrays › Saposin-like › Saposin-like › Saposin-like | 0.72 | 59.0 | 4.34e-01 | 96.8% | 34.4% |
| 4534032 | 4953.1.1.0 ↗ | beta barrels › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like | 0.72 | 55.0 | 4.70e-01 | 100.0% | 50.0% |
| 3933184 | 198.1.1.0 ↗ | alpha arrays › Saposin-like › Saposin-like › Saposin-like | 0.71 | 59.0 | 4.52e-01 | 96.8% | 41.3% |
| 4042981 | 4953.1.1.4 ↗ | beta barrels › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › ASL_C2 | 0.70 | 55.0 | 4.21e-01 | 100.0% | 38.8% |
| 5065662 | 5058.1.1.0 ↗ | alpha bundles › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region | 0.70 | 59.0 | 4.59e-01 | 96.8% | 44.3% |
| 3253152 | 198.1.1.3 ↗ | alpha arrays › Saposin-like › Saposin-like › Saposin-like › SapB_1 | 0.69 | 58.0 | 4.26e-01 | 100.0% | 34.4% |
| 53546 | 5101.1.1.0 ↗ | alpha arrays › C-terminal helical domain of RNA helicase › C-terminal helical domain of RNA helicase › C-terminal helical domain of RNA helicase | 0.68 | 51.0 | 3.54e-01 | 96.8% | 22.8% |
| 4929489 | 101.1.2.897 ↗ | alpha arrays › HTH › HTH › winged helix domain › Zn_ribbon_2 | 0.68 | 54.0 | 4.49e-01 | 100.0% | 47.7% |