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hypothetical_protein_Mvrk_gpp11

Euk-Vir

Maverick-related_virus_strain_Spezl

hypothetical_protein_Mvrk_gpp11__YP_004300289__Maverick-related_virus_strain_Spezl__1932931

Identity

Accession:
YP_004300289 ↗
Protein ID:
hypothetical_protein_Mvrk_gpp11
Kingdom:
euk

Quality

75.8 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-53
PDB
Domain cluster: representative
CATH (52)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2e9xA01 1.20.58.1030 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.90 82.0 6.00e-01 100.0% 43.0%
1hr5A00 1.20.5.420 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C 0.90 72.0 7.43e-01 86.3% 100.0%
2ic6A00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.90 80.0 7.09e-01 98.0% 95.8%
3qo8A01 1.10.287.40 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain 0.89 81.0 6.26e-01 100.0% 54.7%
3rq9A00 1.10.287.2500 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.89 80.0 6.85e-01 98.0% 74.4%
3tklB01 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.88 78.0 7.32e-01 98.0% 95.2%
4nb5B02 1.10.287.160 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat 0.88 78.0 7.24e-01 100.0% 95.3%
2wmmA01 1.20.5.420 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C 0.87 76.0 7.81e-01 100.0% 100.0%
3gnlB02 1.10.287.1890 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.87 74.0 6.72e-01 94.1% 73.5%
1lrzA03 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.87 78.0 7.31e-01 100.0% 90.3%
7ymiZ01 1.10.287.740 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Photosystem II PsbZ, reaction centre 0.87 77.0 7.45e-01 100.0% 98.3%
4ijjB00 1.20.120.910 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › DksA, coiled-coil domain 0.87 77.0 5.68e-01 100.0% 42.3%
2cazD00 6.10.140.820 Special › Helix non-globular › Helix Hairpins › 0.86 76.0 7.26e-01 100.0% 95.0%
3r84A00 1.10.287.3490 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.86 76.0 6.52e-01 100.0% 66.7%
4abmD00 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.86 76.0 6.61e-01 100.0% 97.4%
1vx7301 1.10.287.310 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.85 76.0 6.67e-01 98.0% 71.6%
3b2eF00 1.10.287.660 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.85 75.0 7.04e-01 100.0% 88.7%
1p49A02 1.10.287.550 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.85 77.0 7.35e-01 100.0% 94.9%
1wleA01 1.10.287.40 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain 0.84 76.0 5.78e-01 100.0% 47.4%
3k6tB00 1.20.5.4010 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.84 70.0 7.18e-01 96.1% 93.9%
1z0pA00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.83 73.0 6.45e-01 98.0% 87.7%
4b6xA00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.83 74.0 6.68e-01 100.0% 88.4%
4kzsA02 6.10.140.1870 Special › Helix non-globular › Helix Hairpins › 0.82 74.0 6.64e-01 100.0% 77.1%
1cxzB00 1.10.287.160 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat 0.82 70.0 5.98e-01 100.0% 76.7%
2ke4A00 6.10.140.470 Special › Helix non-globular › Helix Hairpins › 0.81 70.0 5.69e-01 100.0% 64.3%
3fxdC00 1.20.5.420 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C 0.81 69.0 6.98e-01 94.1% 98.0%
2js5A00 1.10.287.660 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.80 69.0 6.21e-01 100.0% 70.4%
2p4vA01 1.10.287.180 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Transcription elongation factor, GreA/GreB, N-terminal domain 0.80 71.0 6.20e-01 100.0% 68.4%
2a2cA03 1.20.1440.340 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › 0.80 66.0 4.90e-01 96.1% 35.5%
1ucuA01 6.10.280.190 Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.80 68.0 6.30e-01 100.0% 100.0%
2gv9A05 1.10.287.690 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › B family DNA polymerase, finger domain 0.77 64.0 6.18e-01 100.0% 84.7%
1ku9A02 1.10.287.450 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.77 65.0 6.12e-01 100.0% 100.0%
1f45B00 1.20.1250.10 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › 0.76 64.0 4.79e-01 98.0% 63.9%
3evyA00 1.20.58.910 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.75 65.0 5.61e-01 100.0% 69.9%
3favD00 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.75 66.0 5.73e-01 100.0% 100.0%
3fxdB00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.75 62.0 6.07e-01 100.0% 86.2%
5b1oA00 1.10.287.130 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain 0.75 64.0 5.97e-01 100.0% 76.9%
3lssA01 1.10.287.40 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain 0.75 62.0 4.99e-01 100.0% 48.2%
2pybA00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.75 63.0 4.59e-01 100.0% 37.1%
3l1nA01 6.10.140.790 Special › Helix non-globular › Helix Hairpins › 0.75 63.0 6.34e-01 100.0% 100.0%
1rv2D04 1.10.287.690 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › B family DNA polymerase, finger domain 0.74 63.0 5.80e-01 100.0% 90.0%
1kfdA02 1.20.1060.10 Mainly Alpha › Up-down Bundle › Taq DNA Polymerase; Chain T, domain 4 › Taq DNA Polymerase; Chain T, domain 4 0.71 59.0 5.43e-01 100.0% 74.6%
4gzrC00 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.69 58.0 5.58e-01 98.0% 90.2%
2yinA01 1.25.40.410 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › DOCK DHR2 domain, lobe A 0.69 60.0 4.47e-01 98.0% 70.3%
2b3tB01 6.10.140.1980 Special › Helix non-globular › Helix Hairpins › 0.69 57.0 5.42e-01 100.0% 87.7%
2lpeA01 6.10.140.1120 Special › Helix non-globular › Helix Hairpins › 0.69 57.0 5.09e-01 100.0% 80.8%
4e4eA01 1.10.287.990 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Fe,Mn superoxide dismutase (SOD) domain 0.68 58.0 5.28e-01 100.0% 77.5%
2lf0A01 4.10.860.10 Few Secondary Structures › Irregular › DNA Excision Repair, Uvrb; Chain A › UVR domain 0.67 58.0 5.58e-01 100.0% 100.0%
2i7uA00 6.10.250.1010 Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.65 54.0 5.20e-01 100.0% 100.0%
1z0jB00 4.10.860.20 Few Secondary Structures › Irregular › DNA Excision Repair, Uvrb; Chain A › Rabenosyn, Rab binding domain 0.64 50.0 5.03e-01 96.1% 96.1%
3lphC00 6.10.140.630 Special › Helix non-globular › Helix Hairpins › 0.63 54.0 5.27e-01 100.0% 91.4%
6ynwH01 1.20.20.10 Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C 0.62 54.0 4.81e-01 100.0% 71.6%
ECOD (45)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3187983 4177.1.1.0 alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like 0.93 86.0 5.72e-01 100.0% 29.1%
3337008 192.2.1.60 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › KIF21A_4th 0.93 86.0 6.05e-01 100.0% 36.4%
3318812 192.8.1.248 alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain › KIF21A_4th 0.92 85.0 5.88e-01 100.0% 34.0%
3810801 632.22.1.139 alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats › KIF21A_4th 0.92 84.0 5.83e-01 100.0% 95.3%
4957831 101.1.2.135 alpha arrays › HTH › HTH › winged helix domain › MarR_2 0.91 85.0 5.71e-01 100.0% 31.5%
3271624 2004.1.1.184 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_11 0.90 82.0 4.70e-01 100.0% 12.6%
1108845 150.1.1.0 alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin 0.90 72.0 7.45e-01 86.3% 100.0%
3840952 601.19.1.39 alpha bundles › Four-helical up-and-down bundle › Apolipoprotein › Apolipoprotein › LIN9_C 0.90 82.0 7.14e-01 100.0% 81.3%
4182090 148.1.3.26 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_9 0.90 82.0 5.23e-01 100.0% 24.2%
5054469 192.7.1.2 alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N 0.89 81.0 6.25e-01 100.0% 53.3%
3493322 2006.1.1.8 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › 5_nucleotid 0.89 81.0 4.99e-01 100.0% 20.2%
5013384 101.1.2.135 alpha arrays › HTH › HTH › winged helix domain › MarR_2 0.89 80.0 5.61e-01 100.0% 34.0%
4052199 4163.1.1.1 alpha bundles › GINS helical bundle-like › GINS helical bundle-like › PSF1 N-terminal domain-like › Sld5 0.89 82.0 5.53e-01 100.0% 31.5%
3741801 192.8.1.0 alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain 0.89 80.0 5.88e-01 100.0% 40.8%
3934625 174.1.1.0 few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain 0.88 79.0 5.87e-01 100.0% 44.0%
4129922 192.7.1.2 alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N 0.88 80.0 6.31e-01 100.0% 52.0%
3205079 148.1.3.26 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_9 0.88 80.0 5.11e-01 100.0% 24.1%
3608014 192.2.1.0 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.88 79.0 6.91e-01 100.0% 68.0%
3838566 148.1.3.26 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_9 0.87 80.0 5.08e-01 100.0% 23.6%
4503293 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.87 80.0 4.61e-01 100.0% 13.1%
4156473 192.7.1.2 alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N 0.87 79.0 6.32e-01 100.0% 54.7%
4116112 192.8.1.353 alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain › Med10 0.86 78.0 6.65e-01 100.0% 63.7%
3163896 605.1.1.0 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.86 78.0 5.05e-01 100.0% 25.2%
3641527 192.8.1.353 alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain › Med10 0.86 78.0 6.62e-01 100.0% 65.0%
4126383 192.8.1.0 alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain 0.86 77.0 5.38e-01 100.0% 32.9%
3350539 192.23.1.6 alpha bundles › Long alpha-hairpin › DUF683 › DUF683 › Med10 0.86 77.0 6.45e-01 100.0% 61.2%
4474737 3711.1.1.44 alpha bundles › LTXXQ motif family protein › LTXXQ motif family protein › LTXXQ motif family protein › Med11 0.86 77.0 6.30e-01 100.0% 56.7%
3071342 605.1.1.2 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › H-kinase_dim 0.85 77.0 6.91e-01 100.0% 73.9%
4300890 3710.1.1.1 alpha bundles › Golgi to ER traffic protein 1 cytosolic domain › Golgi to ER traffic protein 1 cytosolic domain › Golgi to ER traffic protein 1 cytosolic domain › CHD5 0.85 73.0 6.71e-01 100.0% 73.8%
4059065 622.1.1.1 alpha bundles › YvfG-like › HSC20 (HSCB), C-terminal oligomerisation domain › HSC20 (HSCB), C-terminal oligomerisation domain › HSCB_C 0.85 75.0 6.03e-01 100.0% 51.5%
3297107 4006.1.1.0 alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain 0.84 76.0 6.13e-01 100.0% 53.7%
3477418 4992.1.1.12 extended segments › RelB-like › RelB-like › RelB-like › LIN9_C 0.84 71.0 5.68e-01 100.0% 49.5%
3315495 192.8.1.0 alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain 0.83 74.0 6.22e-01 100.0% 69.4%
3229788 3470.1.1.0 extended segments › Glycophorin-A transmembrane domain › Glycophorin-A transmembrane domain › Glycophorin-A transmembrane domain 0.83 72.0 6.91e-01 100.0% 85.0%
5030062 4163.1.1.0 alpha bundles › GINS helical bundle-like › GINS helical bundle-like › PSF1 N-terminal domain-like 0.83 74.0 5.37e-01 100.0% 37.8%
4652719 3291.1.1.0 alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related 0.83 73.0 5.93e-01 100.0% 53.7%
4051951 605.2.1.0 alpha duplicates or obligate multimers › ROP-like › Hypothetical protein D-63 › Hypothetical protein D-63 0.82 73.0 6.02e-01 100.0% 56.7%
3565534 4177.1.1.2 alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › BAR 0.82 72.0 4.60e-01 100.0% 21.2%
3595067 192.8.1.0 alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain 0.79 69.0 5.96e-01 100.0% 65.0%
5007869 601.33.1.0 alpha bundles › Four-helical up-and-down bundle › CHAD domain › CHAD domain 0.78 66.0 5.30e-01 96.1% 64.0%
3258925 192.8.1.0 alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain 0.75 66.0 5.98e-01 100.0% 77.1%
3663990 192.8.1.0 alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain 0.75 65.0 5.92e-01 100.0% 77.1%
3575178 616.1.1.30 alpha arrays › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain › Neur_chan_memb 0.73 60.0 5.47e-01 100.0% 69.3%
4001635 174.1.1.0 few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain 0.72 61.0 4.56e-01 100.0% 37.8%
4216245 4082.1.1.1 alpha duplicates or obligate multimers › Hairy Orange domain › Hairy Orange domain › Hairy Orange domain › Hairy_orange 0.70 54.0 5.64e-01 88.2% 97.8%