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hypothetical_protein_OLNG_00052
Euk-VirOstreococcus_lucimarinus_virus_OlV5
hypothetical_protein_OLNG_00052__YP_007674696__Ostreococcus_lucimarinus_virus_OlV5__754064
Identity
- Accession:
- YP_007674696 ↗
- Protein ID:
- hypothetical_protein_OLNG_00052
- Kingdom:
- euk
Quality
84.0
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Megaviricetes›
Algavirales›
Phycodnaviridae›
Prasinovirus›
Ostreococcus_lucimarinus_virus_OlV5
TaxID: 754064
Cluster
View cluster (10 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-57
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF19141.6 best | DUF5824 | 26.7 | 7.60e-06 | 62.3% | 26.0% |
CATH (16)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2p5vA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.64 | 40.0 | 4.10e-01 | 92.5% | 65.4% |
| 2dbbB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.64 | 40.0 | 4.00e-01 | 92.5% | 61.8% |
| 2cfxA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.62 | 37.0 | 3.80e-01 | 86.8% | 62.0% |
| 2ia0A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.62 | 39.0 | 3.93e-01 | 92.5% | 63.0% |
| 4nleA03 | 1.10.40.30 | Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase Protein R1; domain 1 › Fumarase/aspartase (C-terminal domain) | 0.60 | 43.0 | 3.92e-01 | 79.2% | 73.7% |
| 4pcqA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.59 | 38.0 | 3.94e-01 | 92.5% | 70.0% |
| 2lc3A00 | 1.10.720.80 | Mainly Alpha › Orthogonal Bundle › Transcription Termination Factor Rho, Rna-binding Domain; Chain A, Domain 1 › | 0.59 | 44.0 | 3.73e-01 | 81.1% | 81.8% |
| 2h09A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.56 | 35.0 | 3.24e-01 | 96.2% | 45.1% |
| 2igpA00 | 1.10.418.30 | Mainly Alpha › Orthogonal Bundle › Actin-binding Protein, T-fimbrin; domain 1 › Ncd80 complex, Ncd80 subunit | 0.56 | 40.0 | 3.20e-01 | 81.1% | 36.8% |
| 1mswD04 | 1.10.287.280 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.54 | 42.0 | 3.80e-01 | 88.7% | 84.6% |
| 1w36B01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.54 | 44.0 | 2.94e-01 | 96.2% | 46.8% |
| 1kxpD03 | 1.10.246.10 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › | 0.53 | 39.0 | 3.43e-01 | 84.9% | 72.7% |
| 1pjrA02 | 1.10.10.160 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.53 | 38.0 | 3.50e-01 | 79.2% | 97.2% |
| 1xgsA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 40.0 | 3.57e-01 | 84.9% | 85.7% |
| 2mphA01 | 1.10.720.80 | Mainly Alpha › Orthogonal Bundle › Transcription Termination Factor Rho, Rna-binding Domain; Chain A, Domain 1 › | 0.52 | 42.0 | 3.63e-01 | 92.5% | 62.1% |
| 8ctsB01 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.51 | 38.0 | 3.30e-01 | 81.1% | 71.3% |
ECOD (20)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5032612 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.64 | 41.0 | 4.08e-01 | 92.5% | 61.8% |
| 3959624 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.62 | 39.0 | 4.05e-01 | 92.5% | 68.0% |
| 3289544 | 101.1.2.140 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_AsnC-type | 0.62 | 40.0 | 3.75e-01 | 92.5% | 53.8% |
| 4943799 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.61 | 39.0 | 4.03e-01 | 92.5% | 70.0% |
| 5046275 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.58 | 37.0 | 3.66e-01 | 92.5% | 61.8% |
| 4940480 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.58 | 34.0 | 3.41e-01 | 81.1% | 56.4% |
| 4941943 | 101.1.2.140 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_AsnC-type | 0.56 | 40.0 | 3.92e-01 | 100.0% | 68.3% |
| 5052610 | 101.1.2.141 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_24 | 0.56 | 40.0 | 3.90e-01 | 100.0% | 68.3% |
| 5000424 | 101.1.2.140 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_AsnC-type | 0.56 | 40.0 | 3.88e-01 | 100.0% | 68.3% |
| 5033230 | 101.1.2.141 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_24 | 0.56 | 40.0 | 4.00e-01 | 100.0% | 74.5% |
| 5030878 | 101.1.2.141 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_24 | 0.55 | 40.0 | 3.74e-01 | 100.0% | 63.1% |
| 3233890 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.55 | 45.0 | 4.26e-01 | 92.5% | 84.6% |
| 5030813 | 101.1.2.141 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_24 | 0.55 | 40.0 | 4.12e-01 | 100.0% | 84.0% |
| 4962128 | 101.1.2.141 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_24 | 0.54 | 39.0 | 3.60e-01 | 100.0% | 58.6% |
| 4988024 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.54 | 35.0 | 3.39e-01 | 98.1% | 55.0% |
| 3712062 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.52 | 38.0 | 3.02e-01 | 79.2% | 64.3% |
| 3735508 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.51 | 40.0 | 3.02e-01 | 94.3% | 36.0% |
| 5071963 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.51 | 38.0 | 3.48e-01 | 92.5% | 61.4% |
| 3363790 | 101.1.2.22 ↗ | alpha arrays › HTH › HTH › winged helix domain › PCI | 0.51 | 39.0 | 3.59e-01 | 92.5% | 64.3% |
| 4836986 | 101.1.2.120 ↗ | alpha arrays › HTH › HTH › winged helix domain › DDRGK | 0.50 | 38.0 | 3.43e-01 | 92.5% | 58.7% |
D2
high
residues 64-142
Domain cluster:
rep: LacPavin_0818_WC40_scaffold_15340_prodigal-single.1__X__X__00177__D116-196
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF19141.6 best | DUF5824 | 106.6 | 1.50e-30 | 100.0% | 66.9% |