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hypothetical_protein_OLNG_00162
Euk-VirOstreococcus_lucimarinus_virus_OlV5
hypothetical_protein_OLNG_00162__YP_007674804__Ostreococcus_lucimarinus_virus_OlV5__754064
Identity
- Accession:
- YP_007674804 ↗
- Protein ID:
- hypothetical_protein_OLNG_00162
- Kingdom:
- euk
Quality
76.9
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Megaviricetes›
Algavirales›
Phycodnaviridae›
Prasinovirus›
Ostreococcus_lucimarinus_virus_OlV5
TaxID: 754064
Cluster
View cluster (126 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 255-415
Domain cluster:
rep: putative_capsid_protein_4__YP_003969808__Cafeteria_roenbergensis_virus_BV-PW1__693272__D326-494
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF04451.18 best | Capsid_NCLDV | 53.8 | 2.90e-14 | 98.1% | 71.9% |
D2
medium
residues 36-60_84-165_191-225
Domain cluster:
rep: major_capsid_protein__YP_004063519__Ostreococcus_tauri_virus_2__696472__D95-243
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF16903.13 best | Capsid_N | 28.9 | 1.10e-06 | 88.7% | 28.0% |
D3
medium
residues 61-83_166-190_226-249
Domain cluster:
rep: major_capsid_Protein__YP_010084900__Shrimp_hemocyte_iridescent_virus__2039780__D57-67_83-106_186-212_256-280
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5tipA01 | 2.70.9.10 | Mainly Beta › Distorted Sandwich › Adenovirus Type 2 Hexon; domain 4 › Adenovirus Type 2 Hexon, domain 4 | 0.85 | 79.0 | 5.64e-01 | 98.6% | 86.2% |
| 1o75A02 | 2.30.30.470 | Mainly Beta › Roll › SH3 type barrels. › Penicillin-binding protein Tp47, domain B | 0.66 | 31.0 | 2.66e-01 | 90.3% | 27.7% |
| 6julA02 | 3.30.1490.100 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain | 0.61 | 49.0 | 4.39e-01 | 84.7% | 71.9% |
| 2wliA02 | 2.60.40.1400 | Mainly Beta › Sandwich › Immunoglobulin-like › G protein-activated inward rectifier potassium channel 1 | 0.59 | 46.0 | 3.60e-01 | 86.1% | 68.9% |
| 4u7cB04 | 3.30.1490.100 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain | 0.58 | 45.0 | 3.92e-01 | 83.3% | 65.1% |
| 6x3aA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 43.0 | 3.82e-01 | 81.9% | 67.3% |
| 4ag4A02 | 2.60.120.1190 | Mainly Beta › Sandwich › Jelly Rolls › | 0.56 | 43.0 | 3.22e-01 | 83.3% | 56.4% |
| 3icuA01 | 3.50.30.30 | Alpha Beta › 3-Layer(bba) Sandwich › Glucose Oxidase; domain 1 › | 0.52 | 37.0 | 2.87e-01 | 75.0% | 96.3% |
| 4hscX04 | 2.60.40.1430 | Mainly Beta › Sandwich › Immunoglobulin-like › Perfringolysin, domain 4 | 0.52 | 40.0 | 3.55e-01 | 86.1% | 86.4% |
| 1o75A03 | 2.60.40.1300 | Mainly Beta › Sandwich › Immunoglobulin-like › Penicillin-binding protein Tp47, domain C | 0.50 | 39.0 | 3.22e-01 | 83.3% | 58.6% |
ECOD (13)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4586504 | 11.1.5.85 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › PFF1_C | 0.55 | 46.0 | 3.28e-01 | 91.7% | 31.3% |
| 3624575 | 10.32.1.72 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › TPPII_GBD | 0.55 | 41.0 | 3.53e-01 | 81.9% | 98.3% |
| 3629709 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.55 | 42.0 | 3.55e-01 | 81.9% | 63.3% |
| 3786134 | 11.1.1.646 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TRP_N | 0.54 | 41.0 | 3.26e-01 | 80.6% | 61.4% |
| 3264478 | 11.1.1.793 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF7743 | 0.54 | 41.0 | 3.65e-01 | 81.9% | 85.7% |
| 3222823 | 4081.1.1.5 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Peptidase_M1_N | 0.54 | 44.0 | 3.21e-01 | 90.3% | 38.5% |
| 3391742 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 40.0 | 3.55e-01 | 83.3% | 62.9% |
| 3411436 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.52 | 39.0 | 3.53e-01 | 81.9% | 60.0% |
| 3526370 | 10.32.1.72 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › TPPII_GBD | 0.51 | 37.0 | 3.25e-01 | 80.6% | 99.2% |
| 4115421 | 11.15.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Perfringolysin O beta sandwich domain › Perfringolysin O beta sandwich domain › Thiol_cytolys_C | 0.51 | 40.0 | 3.48e-01 | 86.1% | 82.6% |
| 4464652 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 39.0 | 3.67e-01 | 84.7% | 66.7% |
| 3312666 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.51 | 39.0 | 3.97e-01 | 81.9% | 84.3% |
| 3181848 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.50 | 38.0 | 2.97e-01 | 84.7% | 54.7% |