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hypothetical_protein_OLNG_00186

Euk-Vir

Ostreococcus_lucimarinus_virus_OlV5

hypothetical_protein_OLNG_00186__YP_007674826__Ostreococcus_lucimarinus_virus_OlV5__754064

Identity

Accession:
YP_007674826 ↗
Protein ID:
hypothetical_protein_OLNG_00186
Kingdom:
euk

Quality

70.3 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 22-77
PDB
CATH (9)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1p6vA00 2.40.280.10 Mainly Beta › Beta Barrel › Small Protein B; Chain: A; › Small protein B 0.58 50.0 3.89e-01 98.2% 76.0%
1b72A00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.55 39.0 3.63e-01 73.2% 70.6%
3mwpB02 3.30.420.410 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Arenaviral nucleoprotein, C-terminal domain 0.54 43.0 3.15e-01 92.9% 90.8%
3nqwA00 1.10.3210.10 Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 0.53 38.0 2.63e-01 75.0% 75.3%
1o4xA02 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.52 37.0 3.78e-01 73.2% 88.9%
1icaA00 3.30.30.10 Alpha Beta › 2-Layer Sandwich › Defensin A-like › Knottin, scorpion toxin-like 0.52 33.0 3.65e-01 96.4% 92.5%
2e9yB00 3.40.1160.10 Alpha Beta › 3-Layer(aba) Sandwich › Carbamate kinase › Acetylglutamate kinase-like 0.51 44.0 2.76e-01 98.2% 24.4%
6se1A01 3.40.50.1110 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase 0.51 44.0 2.92e-01 100.0% 95.6%
1vx7G00 3.30.1440.10 Alpha Beta › 2-Layer Sandwich › 50s Ribosomal Protein L5; Chain: A, › Ribosomal protein L5 0.50 34.0 2.77e-01 73.2% 76.6%
ECOD (4)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3430490 221.1.1.80 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › KHA 0.63 37.0 3.43e-01 98.2% 42.7%
3900281 904.1.1.1 few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain › zf-B_box 0.61 43.0 4.30e-01 78.6% 71.7%
3236657 386.1.1.0 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.56 38.0 4.22e-01 96.4% 84.4%
3244955 101.1.1.1 alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain 0.51 36.0 3.48e-01 75.0% 70.8%
D2 medium residues 78-151
PDB