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hypothetical_protein_OlV1_047
Euk-VirOstreococcus_lucimarinus_virus_1
hypothetical_protein_OlV1_047__YP_004061680__Ostreococcus_lucimarinus_virus_1__880162
Identity
- Accession:
- YP_004061680 ↗
- Protein ID:
- hypothetical_protein_OlV1_047
- Kingdom:
- euk
Quality
92.0
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Megaviricetes›
Algavirales›
Phycodnaviridae›
Prasinovirus›
Ostreococcus_lucimarinus_virus_1
TaxID: 880162
Cluster
View cluster (115 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-178_219-242
Domain cluster:
rep: hypothetical_protein_OlV1_190__YP_004061822__Ostreococcus_lucimarinus_virus_1__880162__D145-386
Pfam (6)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF16363.12 best | GDP_Man_Dehyd | 151.4 | 6.20e-44 | 94.0% | 55.4% |
| PF01370.28 | Epimerase | 130.2 | 1.20e-37 | 88.5% | 71.7% |
| PF02719.22 | Polysacc_synt_2 | 35.6 | 8.40e-09 | 88.5% | 52.2% |
| PF04321.24 | RmlD_sub_bind | 46.5 | 3.70e-12 | 87.5% | 48.4% |
| PF01073.26 | 3Beta_HSD | 46.5 | 3.50e-12 | 86.5% | 57.9% |
| PF07993.19 | NAD_binding_4 | 40.4 | 2.80e-10 | 63.5% | 46.1% |
D2
medium
residues 185-217_243-311
Domain cluster:
rep: NAD-dependent_epimerase_dehydratase__YP_007354433__Acanthamoeba_polyphaga_moumouvirus__1269028__D181-219_250-286_303-320
CATH (23)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1r6dA02 | 3.90.25.10 | Alpha Beta › Alpha-Beta Complex › UDP-galactose 4-epimerase; domain 1 › UDP-galactose 4-epimerase, domain 1 | 0.86 | 63.0 | 6.54e-01 | 100.0% | 80.2% |
| 6vloC02 | 3.90.25.10 | Alpha Beta › Alpha-Beta Complex › UDP-galactose 4-epimerase; domain 1 › UDP-galactose 4-epimerase, domain 1 | 0.84 | 67.0 | 6.73e-01 | 100.0% | 83.2% |
| 6kv9A02 | 3.90.25.10 | Alpha Beta › Alpha-Beta Complex › UDP-galactose 4-epimerase; domain 1 › UDP-galactose 4-epimerase, domain 1 | 0.82 | 71.0 | 7.06e-01 | 100.0% | 90.4% |
| 6dntA02 | 3.90.25.10 | Alpha Beta › Alpha-Beta Complex › UDP-galactose 4-epimerase; domain 1 › UDP-galactose 4-epimerase, domain 1 | 0.80 | 72.0 | 7.10e-01 | 100.0% | 90.7% |
| 1kewA02 | 3.90.25.10 | Alpha Beta › Alpha-Beta Complex › UDP-galactose 4-epimerase; domain 1 › UDP-galactose 4-epimerase, domain 1 | 0.80 | 50.0 | 5.55e-01 | 99.0% | 77.4% |
| 3vpsB02 | 3.90.25.10 | Alpha Beta › Alpha-Beta Complex › UDP-galactose 4-epimerase; domain 1 › UDP-galactose 4-epimerase, domain 1 | 0.80 | 56.0 | 5.91e-01 | 100.0% | 81.3% |
| 6bwlA02 | 3.90.25.10 | Alpha Beta › Alpha-Beta Complex › UDP-galactose 4-epimerase; domain 1 › UDP-galactose 4-epimerase, domain 1 | 0.79 | 70.0 | 6.90e-01 | 100.0% | 90.6% |
| 6wjaA02 | 3.90.25.10 | Alpha Beta › Alpha-Beta Complex › UDP-galactose 4-epimerase; domain 1 › UDP-galactose 4-epimerase, domain 1 | 0.79 | 71.0 | 7.12e-01 | 100.0% | 95.2% |
| 2pzmB00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.78 | 73.0 | 5.02e-01 | 100.0% | 39.6% |
| 2p5yA02 | 3.90.25.10 | Alpha Beta › Alpha-Beta Complex › UDP-galactose 4-epimerase; domain 1 › UDP-galactose 4-epimerase, domain 1 | 0.78 | 72.0 | 7.00e-01 | 100.0% | 92.8% |
| 1orrC00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.78 | 72.0 | 4.89e-01 | 100.0% | 39.4% |
| 1gy8B01 | 3.90.25.10 | Alpha Beta › Alpha-Beta Complex › UDP-galactose 4-epimerase; domain 1 › UDP-galactose 4-epimerase, domain 1 | 0.78 | 72.0 | 6.67e-01 | 100.0% | 86.4% |
| 1ek6A01 | 3.90.25.10 | Alpha Beta › Alpha-Beta Complex › UDP-galactose 4-epimerase; domain 1 › UDP-galactose 4-epimerase, domain 1 | 0.77 | 71.0 | 6.60e-01 | 100.0% | 83.3% |
| 6bwcB02 | 3.90.25.30 | Alpha Beta › Alpha-Beta Complex › UDP-galactose 4-epimerase; domain 1 › Polysaccharide biosynthesis protein, CapD-like domain | 0.75 | 59.0 | 6.28e-01 | 97.1% | 94.4% |
| 1eq2D02 | 3.90.25.10 | Alpha Beta › Alpha-Beta Complex › UDP-galactose 4-epimerase; domain 1 › UDP-galactose 4-epimerase, domain 1 | 0.75 | 64.0 | 6.50e-01 | 100.0% | 93.1% |
| 1z7bA02 | 3.90.25.10 | Alpha Beta › Alpha-Beta Complex › UDP-galactose 4-epimerase; domain 1 › UDP-galactose 4-epimerase, domain 1 | 0.74 | 56.0 | 5.99e-01 | 100.0% | 91.0% |
| 2c5aA02 | 3.90.25.10 | Alpha Beta › Alpha-Beta Complex › UDP-galactose 4-epimerase; domain 1 › UDP-galactose 4-epimerase, domain 1 | 0.72 | 59.0 | 5.33e-01 | 100.0% | 66.2% |
| 1i24A02 | 3.90.25.10 | Alpha Beta › Alpha-Beta Complex › UDP-galactose 4-epimerase; domain 1 › UDP-galactose 4-epimerase, domain 1 | 0.71 | 65.0 | 5.82e-01 | 100.0% | 71.8% |
| 2ydyA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.70 | 63.0 | 4.71e-01 | 100.0% | 50.0% |
| 5l4lA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.65 | 58.0 | 4.27e-01 | 100.0% | 95.3% |
| 5fhgA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.58 | 43.0 | 3.49e-01 | 77.5% | 49.7% |
| 3e1sA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.53 | 36.0 | 2.90e-01 | 70.6% | 72.2% |
| 2vhaA01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.53 | 43.0 | 3.56e-01 | 88.2% | 96.1% |
ECOD (48)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3738096 | 2003.1.1.72 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › GDP_Man_Dehyd | 0.89 | 84.0 | 5.52e-01 | 100.0% | 42.5% |
| None | — | 0.89 | 84.0 | 5.49e-01 | 100.0% | 35.1% | |
| 5072181 | 2003.1.1.72 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › GDP_Man_Dehyd | 0.88 | 84.0 | 5.63e-01 | 100.0% | 37.0% |
| 3289259 | 2003.1.1.72 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › GDP_Man_Dehyd | 0.88 | 83.0 | 5.66e-01 | 100.0% | 39.8% |
| None | — | 0.87 | 83.0 | 5.58e-01 | 100.0% | 37.6% | |
| 4011030 | 2003.1.1.72 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › GDP_Man_Dehyd | 0.87 | 82.0 | 5.38e-01 | 100.0% | 38.1% |
| 3293573 | 2003.1.1.141 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Polysacc_synt_2, GDP_Man_Dehyd | 0.87 | 83.0 | 5.55e-01 | 100.0% | 36.7% |
| 4502488 | 2003.1.1.173 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › NAD_binding_4, GDP_Man_Dehyd | 0.87 | 82.0 | 5.49e-01 | 100.0% | 38.6% |
| 4942124 | 2003.1.1.72 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › GDP_Man_Dehyd | 0.87 | 82.0 | 5.55e-01 | 100.0% | 38.2% |
| 3974609 | 2003.1.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains | 0.87 | 82.0 | 5.43e-01 | 100.0% | 38.0% |
| 3996219 | 2003.1.1.72 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › GDP_Man_Dehyd | 0.86 | 81.0 | 5.44e-01 | 100.0% | 37.9% |
| 4955679 | 2003.1.1.20 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Epimerase | 0.86 | 80.0 | 5.44e-01 | 100.0% | 37.6% |
| None | — | 0.86 | 81.0 | 5.57e-01 | 100.0% | 40.0% | |
| None | — | 0.86 | 80.0 | 5.42e-01 | 100.0% | 38.9% | |
| 5045819 | 2003.1.1.20 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Epimerase | 0.85 | 80.0 | 5.49e-01 | 100.0% | 40.6% |
| 3998925 | 2003.1.1.72 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › GDP_Man_Dehyd | 0.85 | 79.0 | 4.73e-01 | 100.0% | 20.5% |
| 2878178 | 2003.1.1.72 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › GDP_Man_Dehyd | 0.84 | 78.0 | 5.21e-01 | 100.0% | 37.3% |
| 4999404 | 2003.1.1.20 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Epimerase | 0.84 | 79.0 | 5.46e-01 | 100.0% | 41.3% |
| 3620187 | 2003.1.1.72 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › GDP_Man_Dehyd | 0.84 | 78.0 | 5.25e-01 | 100.0% | 36.9% |
| 2878176 | 2003.1.1.141 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Polysacc_synt_2, GDP_Man_Dehyd | 0.84 | 78.0 | 5.20e-01 | 100.0% | 37.3% |
| 4975803 | 2003.1.1.72 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › GDP_Man_Dehyd | 0.83 | 78.0 | 5.30e-01 | 100.0% | 37.9% |
| 2632478 | 2003.1.1.20 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Epimerase | 0.83 | 78.0 | 5.26e-01 | 100.0% | 37.8% |
| 3976479 | 2003.1.1.20 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Epimerase | 0.83 | 77.0 | 5.42e-01 | 100.0% | 44.2% |
| 5020625 | 2003.1.1.20 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Epimerase | 0.82 | 77.0 | 5.19e-01 | 100.0% | 37.1% |
| 3647696 | 2003.1.1.153 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Epimerase, GDP_Man_Dehyd | 0.82 | 76.0 | 5.10e-01 | 100.0% | 34.6% |
| 3280535 | 2003.1.1.20 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Epimerase | 0.81 | 76.0 | 5.15e-01 | 100.0% | 37.6% |
| 4348363 | 2003.1.1.20 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Epimerase | 0.81 | 76.0 | 4.99e-01 | 100.0% | 40.0% |
| 4311352 | 2003.1.1.20 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Epimerase | 0.81 | 74.0 | 5.07e-01 | 100.0% | 40.6% |
| 4997995 | 2003.1.1.20 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Epimerase | 0.80 | 75.0 | 5.22e-01 | 100.0% | 40.7% |
| 3280602 | 2003.1.1.20 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Epimerase | 0.80 | 74.0 | 5.14e-01 | 100.0% | 45.8% |
| 5028863 | 2003.1.1.20 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Epimerase | 0.80 | 74.0 | 5.19e-01 | 100.0% | 43.1% |
| 5028667 | 2003.1.1.20 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Epimerase | 0.80 | 74.0 | 5.16e-01 | 100.0% | 39.9% |
| 2639601 | 2003.1.1.20 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Epimerase | 0.80 | 74.0 | 5.12e-01 | 100.0% | 41.2% |
| None | — | 0.79 | 73.0 | 4.95e-01 | 100.0% | 38.9% | |
| 5030575 | 2003.1.1.20 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Epimerase | 0.79 | 73.0 | 5.13e-01 | 100.0% | 39.9% |
| 5081833 | 2003.1.1.20 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Epimerase | 0.79 | 74.0 | 5.07e-01 | 100.0% | 39.7% |
| 3287305 | 2003.1.1.20 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Epimerase | 0.79 | 73.0 | 5.06e-01 | 100.0% | 40.6% |
| 4999425 | 2003.1.1.72 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › GDP_Man_Dehyd | 0.78 | 72.0 | 5.00e-01 | 100.0% | 39.7% |
| 4974126 | 2003.1.1.72 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › GDP_Man_Dehyd | 0.78 | 73.0 | 4.95e-01 | 100.0% | 39.1% |
| 5075706 | 2003.1.1.20 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Epimerase | 0.77 | 71.0 | 5.09e-01 | 100.0% | 44.1% |
| 3270786 | 2003.1.1.141 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Polysacc_synt_2, GDP_Man_Dehyd | 0.77 | 72.0 | 4.85e-01 | 100.0% | 33.4% |
| 2643383 | 2003.1.1.20 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Epimerase | 0.76 | 72.0 | 4.92e-01 | 100.0% | 37.3% |
| None | — | 0.76 | 69.0 | 4.70e-01 | 100.0% | 35.5% | |
| 4969554 | 2003.1.1.20 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Epimerase | 0.71 | 65.0 | 4.56e-01 | 100.0% | 37.1% |
| 5078873 | 2003.1.1.20 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Epimerase | 0.69 | 63.0 | 4.38e-01 | 100.0% | 44.8% |
| 3288246 | 2003.1.1.153 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Epimerase, GDP_Man_Dehyd | 0.69 | 63.0 | 4.49e-01 | 100.0% | 45.8% |
| 5004428 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.54 | 42.0 | 3.25e-01 | 83.3% | 91.5% |
| 5039793 | 219.1.1.77 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › DUF3335 | 0.53 | 36.0 | 2.98e-01 | 71.6% | 89.3% |