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hypothetical_protein_OlV1_121c

Euk-Vir

Ostreococcus_lucimarinus_virus_1

hypothetical_protein_OlV1_121c__YP_004061754__Ostreococcus_lucimarinus_virus_1__880162

Identity

Accession:
YP_004061754 ↗
Protein ID:
hypothetical_protein_OlV1_121c
Kingdom:
euk

Quality

84.8 mean pLDDT

Taxonomy

Bamfordvirae› Nucleocytoviricota› Megaviricetes› Algavirales› Phycodnaviridae› Prasinovirus› Ostreococcus_lucimarinus_virus_1

TaxID: 880162

Cluster

View cluster (14 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 198-296
PDB
Domain cluster: rep: mRNA_guanylyltransferase__NP_048451__Paramecium_bursaria_Chlorella_virus_1__10506__D242-316
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF03919.22 best mRNA_cap_C 31.8 2.90e-07 99.0% 91.3%
D2 medium residues 1-20_52-148
PDB
Domain cluster: rep: Adenylation_DNA_ligase_like_superfamily_domain__YP_008437195__Pandoravirus_salinus__1349410__D92-124_182-237_296-354
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF01331.26 best mRNA_cap_enzyme 40.0 4.70e-10 91.5% 44.0%
D3 medium residues 21-51_149-187
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF01331.26 best mRNA_cap_enzyme 29.7 6.70e-07 57.1% 13.8%
CATH (20)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4pz6A02 3.30.470.30 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › DNA ligase/mRNA capping enzyme 0.91 84.0 5.64e-01 100.0% 83.1%
3kyhC01 3.30.470.30 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › DNA ligase/mRNA capping enzyme 0.87 80.0 5.39e-01 100.0% 84.2%
4d05A01 3.30.1490.70 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › 0.72 62.0 6.08e-01 100.0% 86.8%
1a0iA01 3.30.1490.70 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › 0.70 64.0 6.02e-01 100.0% 89.2%
1x9nA02 3.30.1490.70 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › 0.70 58.0 5.47e-01 90.0% 83.3%
1vs0A01 3.30.1490.70 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › 0.68 57.0 5.58e-01 100.0% 84.2%
3l2pA02 3.30.1490.70 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › 0.65 56.0 5.65e-01 92.9% 91.5%
1xdnA01 3.30.1490.70 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › 0.62 52.0 4.53e-01 94.3% 80.0%
1s68A01 3.30.1490.70 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › 0.61 49.0 4.27e-01 91.4% 89.5%
1uunA01 2.60.40.1650 Mainly Beta › Sandwich › Immunoglobulin-like › Porin MspA (Ig-like beta-sandwich domain) 0.58 43.0 3.55e-01 80.0% 87.9%
1cw1A00 3.40.718.10 Alpha Beta › 3-Layer(aba) Sandwich › Isopropylmalate Dehydrogenase › Isopropylmalate Dehydrogenase 0.58 47.0 3.01e-01 97.1% 74.5%
5hccB02 2.60.40.1930 Mainly Beta › Sandwich › Immunoglobulin-like › Macroglobulin (MG2) domain 0.55 42.0 3.88e-01 84.3% 91.6%
5aiuA00 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.54 36.0 3.14e-01 70.0% 74.0%
2xqyA03 2.60.40.3190 Mainly Beta › Sandwich › Immunoglobulin-like › Herpesvirus glycoprotein H, C-terminal domain 0.54 44.0 3.66e-01 92.9% 75.9%
5eh1A01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 39.0 3.46e-01 81.4% 85.8%
7ox5A01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 40.0 3.59e-01 88.6% 95.1%
1rfeA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.51 39.0 3.27e-01 88.6% 91.2%
4zelB01 2.60.120.310 Mainly Beta › Sandwich › Jelly Rolls › Copper type II, ascorbate-dependent monooxygenase, N-terminal domain 0.51 36.0 2.99e-01 78.6% 77.8%
3lrkA02 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.51 37.0 3.03e-01 81.4% 81.0%
2vvfA01 2.60.120.730 Mainly Beta › Sandwich › Jelly Rolls › 0.50 34.0 2.89e-01 72.9% 78.0%
ECOD (9)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
1298640 206.1.3.4 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › mRNA_cap_enzyme 0.90 84.0 5.61e-01 100.0% 82.0%
3593973 206.1.3.0 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp 0.90 85.0 5.37e-01 100.0% 68.5%
3270724 206.1.3.4 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › mRNA_cap_enzyme 0.89 84.0 5.60e-01 100.0% 77.9%
2573463 302.3.1.0 ↗ a+b two layers › Reverse ferredoxin › a+b domain in low-molecular-weight S-layer protein › a+b domain in low-molecular-weight S-layer protein 0.54 42.0 3.95e-01 85.7% 86.5%
3409733 376.1.1.27 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_5 0.53 32.0 3.44e-01 70.0% 71.7%
3438450 10.10.1.1 ↗ beta sandwiches › jelly-roll › Lipase/lipooxygenase domain (PLAT/LH2 domain) › Lipase/lipooxygenase domain (PLAT/LH2 domain) › PLAT 0.53 40.0 3.34e-01 85.7% 87.4%
3473254 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.52 39.0 3.33e-01 81.4% 88.3%
4188115 109.4.1.1310 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_TRIP12_N 0.51 36.0 2.05e-01 74.3% 29.7%
3685973 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.51 43.0 3.69e-01 100.0% 90.4%