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hypothetical_protein_OlV1_129

Euk-Vir

Ostreococcus_lucimarinus_virus_1

hypothetical_protein_OlV1_129__YP_004061762__Ostreococcus_lucimarinus_virus_1__880162

Identity

Accession:
YP_004061762 ↗
Protein ID:
hypothetical_protein_OlV1_129
Kingdom:
euk

Quality

79.0 mean pLDDT

Taxonomy

Bamfordvirae› Nucleocytoviricota› Megaviricetes› Algavirales› Phycodnaviridae› Prasinovirus› Ostreococcus_lucimarinus_virus_1

TaxID: 880162

Cluster

View cluster (12 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 41-152
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF19260.5 best DUF5903 99.9 1.50e-28 96.4% 86.8%
CATH (18)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1gu9C00 1.20.1290.10 Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like 0.65 48.0 4.21e-01 77.7% 57.7%
5cl3A00 1.25.10.90 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › 0.63 56.0 4.48e-01 100.0% 49.4%
1dceA01 1.25.40.120 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Protein prenylyltransferase 0.62 55.0 4.01e-01 100.0% 40.7%
5z2mB00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.61 55.0 5.20e-01 100.0% 81.8%
2a2fX02 1.20.58.670 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Dsl1p vesicle tethering complex, Tip20p subunit, domain D 0.60 49.0 4.68e-01 88.4% 96.1%
4besA02 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.60 52.0 4.92e-01 94.6% 80.5%
2b6cA02 1.25.40.290 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › ARM repeat domains 0.59 46.0 4.92e-01 95.5% 97.9%
4flbA00 1.25.40.90 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.58 51.0 4.86e-01 100.0% 97.7%
5haxA01 1.20.58.1780 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.54 47.0 3.76e-01 99.1% 65.0%
3p5nA00 1.10.1760.20 Mainly Alpha › Orthogonal Bundle › Arp2/3 complex 21 kDa subunit ARPC3 › 0.54 44.0 3.85e-01 87.5% 82.7%
4axsA00 3.40.1160.10 Alpha Beta › 3-Layer(aba) Sandwich › Carbamate kinase › Acetylglutamate kinase-like 0.54 40.0 3.00e-01 79.5% 64.3%
2wtbA01 3.90.226.10 Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 0.53 47.0 3.49e-01 97.3% 47.1%
3pqaB01 3.40.605.10 Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 0.53 40.0 2.99e-01 78.6% 90.1%
2hr2A00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.53 46.0 4.19e-01 98.2% 74.4%
8d0vA01 1.50.10.10 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › 0.53 44.0 3.16e-01 96.4% 38.1%
5l0wB01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.52 43.0 4.11e-01 98.2% 75.4%
1m62A00 1.20.58.120 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › BAG domain 0.52 35.0 3.85e-01 88.4% 88.5%
3r9mA00 1.25.40.280 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › alix/aip1 like domains 0.51 45.0 3.16e-01 100.0% 76.3%
ECOD (37)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3646898 109.4.1.1256 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3 0.63 49.0 4.89e-01 92.9% 80.0%
3583981 109.4.1.442 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › THOC2_N 0.63 56.0 4.18e-01 99.1% 62.8%
3464588 109.4.1.184 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_1 0.63 56.0 4.67e-01 100.0% 56.9%
3203000 109.4.1.30 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › FAT 0.63 48.0 3.70e-01 98.2% 36.7%
3423828 109.4.1.883 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 0.62 49.0 5.17e-01 93.8% 100.0%
3355208 109.4.1.1262 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, PPR_long 0.62 55.0 3.47e-01 100.0% 19.0%
3442303 109.4.1.1260 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3, PPR_long 0.61 49.0 3.88e-01 100.0% 40.4%
3821798 109.4.1.1424 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_1, PPR_2, PPR_3, TPR_24 0.60 52.0 4.90e-01 100.0% 77.1%
3318106 109.4.1.1282 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, TPR_24 0.60 53.0 3.92e-01 100.0% 38.4%
3385202 109.4.1.1277 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_1, PPR_2, TPR_24 0.60 54.0 4.38e-01 100.0% 52.9%
3832077 109.4.1.1440 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_long, TPR_24 0.60 52.0 3.97e-01 100.0% 40.3%
3325928 109.4.1.1258 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2 0.60 52.0 4.51e-01 100.0% 61.7%
3370621 109.4.1.1279 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, PPR_long, TPR_24 0.60 53.0 4.79e-01 100.0% 71.6%
3809338 109.4.1.883 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 0.60 53.0 4.28e-01 100.0% 51.2%
3659730 109.4.1.883 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 0.59 50.0 4.43e-01 100.0% 62.9%
3812174 109.4.1.1279 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, PPR_long, TPR_24 0.59 51.0 3.47e-01 100.0% 25.4%
3469397 109.4.1.1292 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, PPR_3 0.59 52.0 4.38e-01 100.0% 56.9%
3444129 109.4.1.1440 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_long, TPR_24 0.59 51.0 4.41e-01 100.0% 61.7%
3309832 109.4.1.1262 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, PPR_long 0.59 51.0 4.41e-01 100.0% 61.7%
3310783 109.4.1.1261 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_1, PPR_2, PPR_long 0.58 52.0 4.10e-01 100.0% 72.1%
3825219 109.4.1.1277 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_1, PPR_2, TPR_24 0.58 51.0 4.95e-01 100.0% 87.2%
3430064 109.4.1.1274 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, PPR_3, PPR_long 0.58 50.0 4.37e-01 100.0% 62.9%
3349007 109.4.1.1280 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_long 0.57 51.0 3.97e-01 100.0% 45.2%
3330619 109.4.1.1261 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_1, PPR_2, PPR_long 0.57 49.0 4.61e-01 100.0% 77.1%
3664730 109.4.1.1257 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_1, PPR_2 0.57 49.0 3.67e-01 100.0% 36.1%
3836539 109.4.1.1282 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, TPR_24 0.57 49.0 4.22e-01 100.0% 59.4%
3206756 109.4.1.1261 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_1, PPR_2, PPR_long 0.57 49.0 3.82e-01 100.0% 43.2%
3655099 109.4.1.420 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR 0.56 48.0 4.23e-01 98.2% 61.7%
3192236 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.56 46.0 4.35e-01 91.1% 83.0%
3307414 109.4.1.1257 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_1, PPR_2 0.56 49.0 4.37e-01 100.0% 86.1%
4264622 604.39.1.5 ↗ alpha bundles › Spectrin repeat-like › S-component of energy-coupling factor (ECF) transporters › S-component of energy-coupling factor (ECF) transporters › ECF_trnsprt 0.55 43.0 3.69e-01 83.9% 75.4%
5017125 1075.5.1.4 ↗ alpha bundles › Type II ABC exporter transmembrane domain fold › Multidrug and toxic compound extrusion (MATE) transporter › Multidrug and toxic compound extrusion (MATE) transporter › Polysacc_synt 0.54 42.0 3.49e-01 82.1% 76.0%
2583401 5001.1.1.1 ↗ alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 0.54 37.0 3.06e-01 70.5% 76.1%
4016729 109.4.1.1264 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_8, TPR_16 0.54 45.0 3.85e-01 97.3% 54.9%
3180843 109.4.1.192 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_8 0.53 45.0 3.82e-01 97.3% 53.8%
4986170 2007.1.3.1 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg 0.53 46.0 3.81e-01 100.0% 70.9%
5024110 604.39.1.1 ↗ alpha bundles › Spectrin repeat-like › S-component of energy-coupling factor (ECF) transporters › S-component of energy-coupling factor (ECF) transporters › CbiM 0.51 39.0 3.33e-01 83.0% 64.7%