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hypothetical_protein_OlV1_165c

Euk-Vir

Ostreococcus_lucimarinus_virus_1

hypothetical_protein_OlV1_165c__YP_004061797__Ostreococcus_lucimarinus_virus_1__880162

Identity

Accession:
YP_004061797 ↗
Protein ID:
hypothetical_protein_OlV1_165c
Kingdom:
euk

Quality

76.1 mean pLDDT

Taxonomy

Bamfordvirae› Nucleocytoviricota› Megaviricetes› Algavirales› Phycodnaviridae› Prasinovirus› Ostreococcus_lucimarinus_virus_1

TaxID: 880162

Cluster

View cluster (21 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 13-148
PDB
Domain cluster: rep: hypothetical_protein_MPVG_00067__YP_007676135__Micromonas_pusilla_virus_12T__755272__D13-146
D2 high residues 553-636
PDB
Domain cluster: rep: IMGVR_UViG_3300033781_000034-3300033781-Ga0326759_00004_125332_128028__D740-834
CATH (19)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1dp7P00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 63.0 6.57e-01 96.4% 97.4%
5hvqC01 3.90.1150.220 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › 0.67 55.0 5.67e-01 96.4% 95.0%
3l9fA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 52.0 5.13e-01 97.6% 80.9%
1fnnB03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 56.0 5.23e-01 98.8% 78.6%
5deqB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 48.0 4.92e-01 97.6% 84.3%
4izzB03 1.10.10.1670 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › HetR, flap domain 0.61 52.0 4.76e-01 96.4% 97.4%
2ychA02 3.30.1490.300 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › 0.60 36.0 4.13e-01 98.8% 85.0%
3e1sA01 1.10.10.2220 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.59 50.0 4.80e-01 95.2% 82.1%
1repC02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 51.0 5.03e-01 97.6% 93.4%
3lapA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 41.0 4.43e-01 97.6% 95.6%
1ldjA06 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 42.0 4.56e-01 94.0% 100.0%
4ywzB00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.54 37.0 3.19e-01 72.6% 78.1%
4qclA02 3.30.70.2820 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.53 39.0 3.63e-01 81.0% 77.5%
5tdeA02 3.30.1490.20 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain 0.52 32.0 3.23e-01 95.2% 61.0%
3ue2A01 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.52 32.0 3.23e-01 71.4% 60.2%
1xocA01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.51 30.0 2.48e-01 92.9% 30.3%
2qikA02 3.10.490.10 Alpha Beta › Roll › Hypothetical upf0131 protein ytfp › Gamma-glutamyl cyclotransferase-like 0.51 36.0 2.98e-01 73.8% 78.3%
4ghbA00 2.40.160.190 Mainly Beta › Beta Barrel › Porin › 0.51 41.0 3.01e-01 91.7% 60.4%
1hcyA02 1.10.1280.10 Mainly Alpha › Orthogonal Bundle › di-copper center containing domain from catechol oxidase › Di-copper center containing domain from catechol oxidase 0.51 44.0 3.27e-01 97.6% 87.7%
ECOD (62)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5081315 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.86 71.0 7.55e-01 95.2% 98.7%
4973290 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.84 66.0 7.17e-01 96.4% 100.0%
5029778 101.1.2.43 ↗ alpha arrays › HTH › HTH › winged helix domain › Pox_D5 0.81 71.0 7.00e-01 98.8% 88.9%
5022021 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.80 73.0 6.49e-01 100.0% 71.3%
3688358 101.1.2.34 ↗ alpha arrays › HTH › HTH › winged helix domain › RFX_DNA_binding 0.79 66.0 6.73e-01 98.8% 93.8%
3993626 101.1.2.34 ↗ alpha arrays › HTH › HTH › winged helix domain › RFX_DNA_binding 0.78 68.0 6.82e-01 100.0% 92.9%
3883278 101.1.2.34 ↗ alpha arrays › HTH › HTH › winged helix domain › RFX_DNA_binding 0.76 67.0 6.41e-01 100.0% 84.2%
3689786 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.75 64.0 5.03e-01 100.0% 45.3%
3480455 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.75 64.0 6.60e-01 98.8% 100.0%
3537242 101.1.2.34 ↗ alpha arrays › HTH › HTH › winged helix domain › RFX_DNA_binding 0.74 65.0 6.18e-01 100.0% 81.0%
3743842 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.73 67.0 6.28e-01 100.0% 84.0%
3498779 101.1.2.34 ↗ alpha arrays › HTH › HTH › winged helix domain › RFX_DNA_binding 0.73 65.0 6.50e-01 100.0% 97.6%
3729476 101.1.2.34 ↗ alpha arrays › HTH › HTH › winged helix domain › RFX_DNA_binding 0.73 66.0 5.94e-01 100.0% 89.6%
3249045 101.1.15.0 ↗ alpha arrays › HTH › HTH › HAT1, C-terminal domain 0.73 63.0 5.36e-01 98.8% 60.0%
3177239 101.1.2.34 ↗ alpha arrays › HTH › HTH › winged helix domain › RFX_DNA_binding 0.72 65.0 5.54e-01 100.0% 91.9%
4012878 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.70 63.0 5.70e-01 100.0% 82.6%
3898745 101.1.2.34 ↗ alpha arrays › HTH › HTH › winged helix domain › RFX_DNA_binding 0.70 62.0 6.00e-01 100.0% 88.4%
4990676 101.1.2.101 ↗ alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.70 61.0 5.60e-01 97.6% 76.4%
3396890 101.1.2.34 ↗ alpha arrays › HTH › HTH › winged helix domain › RFX_DNA_binding 0.69 62.0 6.10e-01 100.0% 95.6%
3601870 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.68 55.0 5.57e-01 97.6% 88.2%
5036311 101.1.2.101 ↗ alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.68 61.0 5.75e-01 98.8% 83.0%
3597393 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.68 60.0 4.87e-01 96.4% 53.3%
3628907 101.1.2.394 ↗ alpha arrays › HTH › HTH › winged helix domain › eWH_GTF3C1 0.67 60.0 3.35e-01 98.8% 10.2%
4961270 101.1.2.101 ↗ alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.67 59.0 5.53e-01 98.8% 81.9%
5050129 101.1.2.101 ↗ alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.66 59.0 5.40e-01 98.8% 80.0%
3238923 101.1.2.394 ↗ alpha arrays › HTH › HTH › winged helix domain › eWH_GTF3C1 0.66 59.0 3.57e-01 98.8% 23.9%
3797519 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.66 59.0 3.53e-01 98.8% 22.9%
5073929 101.1.2.101 ↗ alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.65 58.0 5.32e-01 98.8% 77.3%
3413423 101.1.1.21 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_Tc5 0.65 51.0 5.37e-01 96.4% 96.0%
5035685 101.1.2.48 ↗ alpha arrays › HTH › HTH › winged helix domain › PadR 0.64 51.0 4.56e-01 97.6% 60.5%
4948099 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.63 56.0 5.14e-01 98.8% 80.0%
5065308 101.1.2.101 ↗ alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.63 56.0 4.97e-01 98.8% 73.3%
5075771 101.1.2.48 ↗ alpha arrays › HTH › HTH › winged helix domain › PadR 0.63 50.0 4.67e-01 97.6% 68.2%
5082386 101.1.2.48 ↗ alpha arrays › HTH › HTH › winged helix domain › PadR 0.63 50.0 4.48e-01 97.6% 60.5%
3739985 101.1.2.98 ↗ alpha arrays › HTH › HTH › winged helix domain › CDT1 0.62 53.0 4.34e-01 97.6% 51.0%
3485400 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.62 53.0 5.00e-01 97.6% 93.3%
5003912 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.61 53.0 4.40e-01 100.0% 86.3%
4959599 101.1.2.48 ↗ alpha arrays › HTH › HTH › winged helix domain › PadR 0.61 48.0 4.47e-01 97.6% 65.8%
5029803 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.61 48.0 4.21e-01 97.6% 56.2%
3788427 101.1.2.207 ↗ alpha arrays › HTH › HTH › winged helix domain › TFC3_eWH 0.61 52.0 4.95e-01 97.6% 81.0%
3587826 101.1.2.48 ↗ alpha arrays › HTH › HTH › winged helix domain › PadR 0.61 47.0 4.44e-01 97.6% 67.6%
4934296 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.61 48.0 4.54e-01 97.6% 71.4%
3585425 101.1.2.98 ↗ alpha arrays › HTH › HTH › winged helix domain › CDT1 0.60 52.0 5.03e-01 97.6% 95.8%
3963083 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.60 48.0 4.13e-01 95.2% 54.1%
3481547 101.1.2.68 ↗ alpha arrays › HTH › HTH › winged helix domain › RNA_pol_Rpc34 0.60 52.0 4.34e-01 97.6% 62.7%
3343334 101.1.2.98 ↗ alpha arrays › HTH › HTH › winged helix domain › CDT1 0.60 51.0 4.32e-01 97.6% 55.9%
3953987 101.1.2.213 ↗ alpha arrays › HTH › HTH › winged helix domain › NrtR_WHD 0.60 43.0 4.40e-01 85.7% 80.0%
5051534 101.1.2.48 ↗ alpha arrays › HTH › HTH › winged helix domain › PadR 0.60 47.0 3.72e-01 97.6% 40.0%
4024350 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.59 51.0 4.37e-01 97.6% 63.6%
3670739 101.1.2.98 ↗ alpha arrays › HTH › HTH › winged helix domain › CDT1 0.59 51.0 4.14e-01 97.6% 50.6%
3731543 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.59 52.0 3.77e-01 100.0% 49.0%
3264027 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.59 51.0 5.06e-01 97.6% 91.1%
5001098 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.59 46.0 4.55e-01 97.6% 81.1%
4999532 101.1.2.48 ↗ alpha arrays › HTH › HTH › winged helix domain › PadR 0.57 49.0 3.64e-01 97.6% 38.3%
2391543 101.1.2.48 ↗ alpha arrays › HTH › HTH › winged helix domain › PadR 0.57 49.0 3.83e-01 100.0% 76.6%
4964911 101.1.2.920 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_TbsP_C 0.55 44.0 3.95e-01 97.6% 60.8%
3401082 101.1.2.352 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_Tnp_Tc5 0.55 48.0 4.40e-01 100.0% 75.5%
5021160 327.11.2.82 ↗ a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › PF27275 0.52 35.0 3.50e-01 81.0% 65.6%
3265322 221.1.2.0 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Alpha-L RNA-binding motif 0.52 38.0 3.96e-01 100.0% 89.3%
1176522 810.1.1.3 ↗ a+b two layers › BtrG-like (Pfam 03674) › BtrG-like (Pfam 03674) › BtrG-like (Pfam 03674) › AIG2_2 0.51 36.0 2.97e-01 73.8% 77.8%
4117256 101.1.2.88 ↗ alpha arrays › HTH › HTH › winged helix domain › Dimerisation 0.50 42.0 3.73e-01 96.4% 64.6%
3692895 375.1.1.179 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIE_alpha 0.50 43.0 3.23e-01 98.8% 82.6%
D3 medium residues 167-255
PDB
Domain cluster: rep: hypothetical_protein_OtV2_151__YP_004063584__Ostreococcus_tauri_virus_2__696472__D3-92
D4 medium residues 372-551
PDB
Domain cluster: rep: MN062720.1__QDP45567.1__SEA_FUZZBUSTER_83__00083__D568-722_747-764
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF19263.6 best DUF5906 41.9 2.00e-10 61.7% 99.1%