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hypothetical_protein_OlV1_196

Euk-Vir

Ostreococcus_lucimarinus_virus_1

hypothetical_protein_OlV1_196__YP_004061828__Ostreococcus_lucimarinus_virus_1__880162

Identity

Accession:
YP_004061828 ↗
Protein ID:
hypothetical_protein_OlV1_196
Kingdom:
euk

Quality

74.4 mean pLDDT

Taxonomy

Bamfordvirae› Nucleocytoviricota› Megaviricetes› Algavirales› Phycodnaviridae› Prasinovirus› Ostreococcus_lucimarinus_virus_1

TaxID: 880162

Cluster

View cluster (8 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 3-36
PDB
Domain cluster: representative
CATH (43)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1biqA00 1.10.620.20 Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase, subunit A › Ribonucleotide Reductase, subunit A 0.76 40.0 2.28e-01 79.4% 5.0%
3hh0A01 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.68 47.0 3.66e-01 94.1% 34.7%
3e9lA02 1.20.80.40 Mainly Alpha › Up-down Bundle › Acyl-CoA Binding Protein › Prp8 RNase H domain, fingers region 0.67 53.0 4.04e-01 100.0% 54.7%
2x4hA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 46.0 3.08e-01 91.2% 20.2%
3r4iA02 6.10.140.960 Special › Helix non-globular › Helix Hairpins › 0.64 40.0 3.31e-01 73.5% 31.7%
3hxlA04 3.30.1370.220 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.64 43.0 3.25e-01 73.5% 30.4%
1r7jA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 40.0 3.01e-01 94.1% 24.4%
2x49A02 3.40.5.40 Alpha Beta › 3-Layer(aba) Sandwich › Ribosomal Protein L9; domain 1 › FHIPEP family, domain 2 0.61 36.0 3.28e-01 73.5% 35.4%
8bypX01 3.90.1240.10 Alpha Beta › Alpha-Beta Complex › Zincin-like › "Metalloproteases (""zincins""), catalytic domain like" 0.60 48.0 2.78e-01 97.1% 28.4%
1hw1A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 46.0 3.57e-01 85.3% 41.3%
4ev0A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 43.0 3.22e-01 76.5% 100.0%
2f1rA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.59 46.0 3.18e-01 100.0% 87.8%
6oinA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 41.0 3.40e-01 100.0% 37.3%
1nj4A01 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.58 45.0 2.80e-01 97.1% 26.0%
1fw8A01 3.40.50.1260 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphoglycerate kinase, N-terminal domain 0.58 39.0 2.35e-01 79.4% 8.9%
4a17H02 3.30.60.300 Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › 0.58 41.0 3.97e-01 100.0% 66.7%
1fshA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 40.0 3.26e-01 94.1% 40.4%
3fryA01 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.58 50.0 4.09e-01 100.0% 75.0%
2fnaA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 42.0 3.33e-01 94.1% 38.4%
5bq3A02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.57 38.0 2.49e-01 70.6% 41.3%
7t7jA02 3.40.640.10 Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.57 43.0 2.69e-01 91.2% 18.9%
3f5fA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.54 38.0 2.27e-01 76.5% 49.0%
4inaA02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.54 44.0 2.81e-01 100.0% 89.8%
1tjyA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.54 37.0 2.51e-01 76.5% 41.8%
3qaoA00 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.53 46.0 3.05e-01 100.0% 25.7%
1b48A01 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.53 46.0 3.33e-01 100.0% 62.5%
7tjbA01 3.40.50.1110 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase 0.53 40.0 2.63e-01 100.0% 89.8%
1tbxB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 37.0 2.88e-01 100.0% 30.0%
3e97A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 42.0 3.25e-01 91.2% 73.1%
8dgfB01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.53 37.0 2.27e-01 73.5% 19.9%
7k98E03 3.30.56.10 Alpha Beta › 2-Layer Sandwich › Phenylalanyl-tRNA Synthetase; Chain B, domain 1 › 0.53 45.0 3.63e-01 100.0% 57.4%
3c9hA02 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.52 43.0 2.95e-01 100.0% 51.7%
3aeiA00 1.10.287.370 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.52 37.0 2.78e-01 88.2% 26.6%
4by6D02 1.25.40.800 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.52 37.0 2.33e-01 94.1% 12.0%
7febA03 3.40.50.12790 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › FHIPEP family, domain 4 0.52 39.0 2.86e-01 82.4% 95.7%
1lnwF01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 45.0 3.06e-01 100.0% 65.3%
4b3hA03 1.10.1040.50 Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › 0.52 41.0 2.59e-01 97.1% 56.1%
3ucsA00 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.52 45.0 3.25e-01 100.0% 51.5%
1earA02 3.30.70.790 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › UreE, C-terminal domain 0.52 43.0 3.46e-01 97.1% 59.4%
3u5eI02 3.30.60.300 Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › 0.51 36.0 3.34e-01 100.0% 55.3%
1i7dA02 1.10.460.10 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; domain 2 › Topoisomerase I, domain 2 0.51 43.0 2.74e-01 100.0% 91.1%
5y9sC01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 39.0 2.99e-01 100.0% 35.4%
7rtyA01 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.51 43.0 2.64e-01 100.0% 70.5%
ECOD (44)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3688231 5069.1.1.0 ↗ alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes 0.71 50.0 3.22e-01 76.5% 17.6%
4018916 149.1.1.1 ↗ alpha arrays › Cytochrome P450 › Cytochrome P450 › Cytochrome P450 › p450 0.67 44.0 2.43e-01 94.1% 4.8%
5019274 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.66 53.0 3.35e-01 88.2% 77.6%
4071664 101.1.2.1 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.66 40.0 2.83e-01 73.5% 19.0%
3594246 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.65 45.0 2.42e-01 73.5% 17.2%
3387117 101.1.2.1 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.59 41.0 3.08e-01 76.5% 31.2%
3944117 2008.1.1.0 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.58 40.0 2.70e-01 73.5% 17.7%
3211053 174.1.1.0 ↗ few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain 0.58 39.0 2.54e-01 82.4% 15.5%
3981748 101.1.2.1 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.57 40.0 3.00e-01 73.5% 95.3%
137857 101.1.2.1 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.56 40.0 2.94e-01 76.5% 42.2%
4585075 101.1.2.1 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.56 38.0 2.94e-01 76.5% 31.2%
4599024 3001.1.1.1 ↗ alpha arrays › Tetrahydrodipicolinate-N-succinlytransferase, N-terminal 3-helical domain › Tetrahydrodipicolinate-N-succinlytransferase, N-terminal 3-helical domain › Tetrahydrodipicolinate-N-succinlytransferase, N-terminal 3-helical domain › THDPS_N_2 0.56 38.0 2.80e-01 73.5% 34.1%
3973326 101.1.2.1 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.55 39.0 2.84e-01 76.5% 43.3%
3945655 101.1.2.1 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.55 39.0 2.89e-01 76.5% 32.2%
3285856 101.1.2.1 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.54 37.0 2.79e-01 76.5% 27.8%
3969371 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.54 38.0 2.85e-01 100.0% 28.9%
3947249 101.1.2.1 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.54 38.0 2.91e-01 76.5% 35.0%
3947768 101.1.2.1 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.54 38.0 2.84e-01 100.0% 28.9%
3941446 101.1.2.1 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.53 37.0 2.81e-01 70.6% 28.2%
3966780 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.53 39.0 2.90e-01 76.5% 61.1%
4034171 101.1.2.1 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.53 37.0 2.85e-01 100.0% 30.6%
3946019 101.1.2.1 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.53 38.0 2.81e-01 100.0% 28.9%
3590569 101.1.2.1 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.53 38.0 2.91e-01 76.5% 33.8%
3973740 101.1.2.1 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.53 40.0 2.89e-01 100.0% 29.0%
3977861 101.1.2.1 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.53 37.0 2.85e-01 100.0% 30.6%
3941586 101.1.2.1 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.52 38.0 2.90e-01 100.0% 32.5%
3963507 4275.1.1.1 ↗ alpha arrays › Hypothetical protein YqbG-like › Hypothetical protein YqbG-like › Hypothetical protein YqbG-like › Phage_connect_1 0.52 44.0 3.15e-01 100.0% 65.5%
4176786 2002.1.1.102 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP 0.52 41.0 2.48e-01 100.0% 91.8%
4137092 101.1.2.1 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.52 36.0 2.85e-01 100.0% 32.5%
4185875 101.1.2.1 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.52 36.0 2.76e-01 76.5% 34.1%
5046209 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.51 43.0 3.33e-01 100.0% 48.2%
3974491 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.51 39.0 3.21e-01 100.0% 44.6%
4030795 101.1.2.1 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.51 39.0 2.96e-01 100.0% 34.1%
4259035 101.1.2.1 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.51 36.0 2.70e-01 76.5% 28.4%
3970001 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.51 39.0 2.92e-01 100.0% 32.2%
4154788 101.1.2.1 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.51 39.0 2.94e-01 100.0% 34.1%
4009354 101.1.2.1 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.51 39.0 2.93e-01 100.0% 32.2%
3946198 101.1.2.1 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.51 36.0 2.73e-01 100.0% 30.6%
3946350 101.1.2.1 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.51 38.0 2.88e-01 100.0% 32.2%
3983219 101.1.2.1 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.51 38.0 2.76e-01 100.0% 27.6%
4008585 101.1.2.1 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.50 39.0 2.89e-01 100.0% 32.2%
3280201 101.1.2.1 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.50 38.0 2.88e-01 100.0% 32.2%
3284225 101.1.2.1 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.50 37.0 2.96e-01 100.0% 36.3%
4584593 101.1.2.1 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.50 37.0 2.82e-01 100.0% 32.2%