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hypothetical_protein_OrNV_gp005
Euk-VirOryctes_rhinoceros_nudivirus
hypothetical_protein_OrNV_gp005__YP_002321316__Oryctes_rhinoceros_nudivirus__92521
Identity
- Accession:
- YP_002321316 ↗
- Protein ID:
- hypothetical_protein_OrNV_gp005
- Kingdom:
- euk
Quality
74.9
mean pLDDT
Taxonomy
TaxID: 92521
Cluster
View cluster (5 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-14_106-117_129-190
D2
medium
residues 15-105_118-128
Domain cluster:
rep: GfV-B58-ORF1__YP_001029393__Ichnoviriform_fumiferanae__419435__D2-87
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3mwpB02 | 3.30.420.410 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Arenaviral nucleoprotein, C-terminal domain | 0.69 | 60.0 | 5.01e-01 | 100.0% | 56.1% |
| 4okeA00 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.68 | 61.0 | 5.29e-01 | 100.0% | 72.5% |
| 2iz4A02 | 2.20.25.590 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.55 | 18.0 | 2.63e-01 | 72.5% | 57.1% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3624820 | 2484.1.1.65 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Maelstrom | 0.72 | 64.0 | 4.57e-01 | 100.0% | 43.5% |
| 3706908 | 2484.1.1.13 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_T | 0.71 | 65.0 | 4.65e-01 | 100.0% | 41.8% |
| 3799955 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.70 | 62.0 | 4.63e-01 | 100.0% | 50.9% |
| 3612874 | 2484.1.1.13 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_T | 0.69 | 63.0 | 4.56e-01 | 100.0% | 46.1% |
| 3599368 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.68 | 62.0 | 4.62e-01 | 100.0% | 51.6% |
| 3784569 | 389.1.1.109 ↗ | few secondary structure elements › EGF-like › EGF-related › EGF/Laminin › Vps3844_C | 0.58 | 24.0 | 3.15e-01 | 73.5% | 67.3% |
| 3491998 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.57 | 38.0 | 3.51e-01 | 86.3% | 52.6% |
| 3946510 | 803.1.1.0 ↗ | a+b duplicates or obligate multimers › Hypothetical protein YoaG › Hypothetical protein YoaG › Hypothetical protein YoaG | 0.56 | 24.0 | 3.36e-01 | 73.5% | 86.7% |
| 3992928 | 73.1.1.0 ↗ | beta sandwiches › SMAD/FHA domain › SMAD/FHA domain › SMAD/FHA domain | 0.51 | 30.0 | 2.91e-01 | 73.5% | 50.0% |
| 3939245 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.51 | 45.0 | 3.13e-01 | 100.0% | 72.1% |