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hypothetical_protein_OrNV_gp111

Euk-Vir

Oryctes_rhinoceros_nudivirus

hypothetical_protein_OrNV_gp111__YP_002321422__Oryctes_rhinoceros_nudivirus__92521

Identity

Accession:
YP_002321422 ↗
Protein ID:
hypothetical_protein_OrNV_gp111
Kingdom:
euk

Quality

72.1 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 1-48
PDB
Domain cluster: representative
CATH (46)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4ye6A02 1.10.10.2420 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.80 68.0 6.45e-01 97.9% 98.3%
1ci4A00 1.10.150.40 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Barrier-to-autointegration factor, BAF 0.79 69.0 5.67e-01 100.0% 76.1%
3lcnB00 1.10.340.40 Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › Nuclear abundant poly(A) RNA-bind protein 2, N-terminal domain 0.76 65.0 5.25e-01 100.0% 49.5%
1zq3P00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.76 64.0 5.78e-01 100.0% 69.1%
4rayA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 62.0 5.26e-01 100.0% 76.5%
2bnkA00 1.10.8.600 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Phage phi29 replication organiser protein p16.7-like 0.73 48.0 4.36e-01 70.8% 51.6%
3zqcA02 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.73 59.0 5.40e-01 97.9% 68.8%
6ui4A02 1.20.58.530 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.73 62.0 4.38e-01 100.0% 43.2%
1ug2A01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.72 57.0 5.64e-01 95.8% 84.6%
1ignB02 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.72 61.0 5.03e-01 100.0% 55.4%
7ccmB01 1.10.437.10 Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › Blc2-like 0.72 62.0 4.42e-01 97.9% 43.4%
2llkA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.72 52.0 5.51e-01 95.8% 95.1%
3e3vA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 60.0 5.86e-01 100.0% 88.7%
3eyyA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 57.0 5.00e-01 100.0% 62.2%
2dodA00 1.10.10.440 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › FF domain 0.70 58.0 5.04e-01 100.0% 61.0%
1ofcX04 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.70 58.0 4.81e-01 100.0% 60.6%
2xigA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 57.0 4.78e-01 100.0% 57.1%
2doeA00 1.10.10.440 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › FF domain 0.69 57.0 4.93e-01 100.0% 62.7%
2k85A00 1.10.10.440 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › FF domain 0.69 57.0 5.31e-01 100.0% 90.8%
4mtdD01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 54.0 4.70e-01 100.0% 59.1%
2cjjA00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.67 57.0 5.33e-01 100.0% 81.0%
4g84A01 3.30.930.10 Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 0.67 55.0 3.39e-01 100.0% 28.5%
2cqqA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.67 55.0 5.07e-01 100.0% 71.6%
2lrdA00 1.10.10.1840 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.66 48.0 4.53e-01 85.4% 63.9%
5fhiA02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.66 44.0 3.14e-01 95.8% 23.7%
2gxaE01 1.10.10.510 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Zinc finger, large T-antigen D1 domain 0.65 53.0 4.82e-01 100.0% 82.2%
1abvA00 1.10.520.20 Mainly Alpha › Orthogonal Bundle › Peroxidase; domain 1 › N-terminal domain of the delta subunit of the F1F0-ATP synthase 0.65 51.0 4.10e-01 91.7% 51.4%
1f20A01 3.40.50.80 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module 0.65 53.0 3.70e-01 93.8% 34.4%
3tjmA02 1.10.1470.20 Mainly Alpha › Orthogonal Bundle › Protein Yjbj; Chain: A; › Fatty acid synthase; domain 2 0.65 52.0 4.37e-01 95.8% 62.2%
2hoqA02 1.10.150.520 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 0.63 51.0 4.39e-01 93.8% 60.8%
1h8eG02 3.40.1380.10 Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate Kinase; Chain: A, domain 1 › ATP synthase, F1 complex, gamma subunit 0.63 52.0 3.61e-01 95.8% 77.5%
2mw2A00 1.20.1280.40 Mainly Alpha › Up-down Bundle › Monooxygenase › HHA 0.61 52.0 4.72e-01 100.0% 70.1%
2yukA00 1.10.30.10 Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › High mobility group box domain 0.61 43.0 3.49e-01 75.0% 44.4%
2go7A02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.61 49.0 4.54e-01 97.9% 82.1%
6s10A01 1.10.1710.10 Mainly Alpha › Orthogonal Bundle › Fertility Inhibition Protein O; Chain: A; Domain 1 › ProQ/FinO domain 0.59 47.0 3.93e-01 100.0% 63.7%
2pkeA02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.58 45.0 4.06e-01 97.9% 85.9%
4evfA01 1.10.220.10 Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › Annexin 0.56 43.0 3.99e-01 93.8% 64.8%
5cofA00 1.20.120.450 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › dinb family like domain 0.56 44.0 2.98e-01 85.4% 36.6%
1v9mA02 1.20.1690.10 Mainly Alpha › Up-down Bundle › V-type ATP synthase subunit C fold › V-type ATP synthase subunit C domain 0.55 43.0 3.55e-01 95.8% 71.3%
1wkbA03 1.10.730.10 Mainly Alpha › Orthogonal Bundle › Isoleucyl-tRNA Synthetase; Domain 1 › Isoleucyl-tRNA Synthetase; Domain 1 0.54 44.0 3.33e-01 91.7% 54.5%
3ddhA02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.53 41.0 3.71e-01 100.0% 86.4%
1yuzB01 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.52 45.0 3.30e-01 100.0% 84.8%
3l09A01 1.20.58.1460 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.52 45.0 3.59e-01 97.9% 64.3%
4kjmA02 1.20.5.420 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C 0.52 40.0 3.83e-01 83.3% 78.2%
4g1tA02 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.51 39.0 3.69e-01 85.4% 68.9%
2dsjA01 1.20.970.10 Mainly Alpha › Up-down Bundle › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3 › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C 0.51 41.0 3.85e-01 100.0% 76.1%
ECOD (62)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5080257 101.35.1.0 alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX 0.91 78.0 7.19e-01 100.0% 75.0%
3704050 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.88 69.0 6.82e-01 87.5% 82.0%
167309 592.2.1.3 alpha arrays › PWI domain-like › YugE-like › YugE-like › Nab2 0.85 74.0 5.68e-01 100.0% 44.8%
3800383 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.84 74.0 6.70e-01 100.0% 73.8%
3672635 101.1.1.295 alpha arrays › HTH › HTH › Three-helical HTH › HTH_70 0.83 73.0 6.28e-01 100.0% 68.0%
4013216 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.82 71.0 6.65e-01 97.9% 93.3%
3236431 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.81 71.0 6.28e-01 100.0% 70.0%
3389549 101.11.1.1 alpha arrays › HTH › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › PNPase 0.81 71.0 5.76e-01 100.0% 74.4%
4953832 7000.1.1.0 alpha arrays › inserted region in the C-terminal domain of the archeal LeuRS › inserted region in the C-terminal domain of the archeal LeuRS › inserted region in the C-terminal domain of the archeal LeuRS 0.80 69.0 6.71e-01 100.0% 89.1%
3993576 610.3.1.3 alpha arrays › ERP29 C domain-like › GatB/GatE C-terminal domain › GatB/GatE C-terminal domain › tRNA_synt_1c_R1 0.80 69.0 4.79e-01 100.0% 35.2%
3406014 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.80 71.0 6.45e-01 100.0% 73.8%
3992048 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.79 69.0 6.66e-01 100.0% 89.1%
3504507 610.3.1.3 alpha arrays › ERP29 C domain-like › GatB/GatE C-terminal domain › GatB/GatE C-terminal domain › tRNA_synt_1c_R1 0.79 68.0 4.58e-01 100.0% 31.4%
3783147 101.1.2.212 alpha arrays › HTH › HTH › winged helix domain › Cac1_C 0.79 70.0 6.15e-01 100.0% 82.9%
5048341 4156.1.1.0 alpha arrays › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like 0.78 68.0 5.40e-01 100.0% 82.0%
3925094 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.78 67.0 6.51e-01 100.0% 87.3%
3337658 610.3.1.3 alpha arrays › ERP29 C domain-like › GatB/GatE C-terminal domain › GatB/GatE C-terminal domain › tRNA_synt_1c_R1 0.76 65.0 4.43e-01 100.0% 31.4%
3940696 101.1.1.103 alpha arrays › HTH › HTH › Three-helical HTH › DUF4817 0.76 66.0 6.53e-01 100.0% 94.0%
3925766 101.1.1.103 alpha arrays › HTH › HTH › Three-helical HTH › DUF4817 0.76 66.0 5.76e-01 100.0% 64.0%
4995716 101.43.1.0 alpha arrays › HTH › Phage G20C small terminase N-terminal domain › Phage G20C small terminase N-terminal domain 0.76 64.0 6.08e-01 100.0% 88.3%
4028411 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.75 64.0 5.86e-01 97.9% 86.2%
4998572 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.75 64.0 5.39e-01 100.0% 57.6%
3573652 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.74 63.0 6.32e-01 100.0% 96.0%
3491303 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.74 66.0 5.22e-01 100.0% 69.5%
4407721 101.8.1.2 alpha arrays › HTH › An anticodon-binding domain of class I aminoacyl-tRNA synthetases › An anticodon-binding domain of class I aminoacyl-tRNA synthetases › Anticodon_2 0.73 62.0 4.36e-01 97.9% 41.9%
3281824 101.1.8.0 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes 0.73 57.0 5.58e-01 100.0% 80.0%
3628499 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.73 63.0 4.99e-01 100.0% 52.0%
5014384 101.1.2.54 alpha arrays › HTH › HTH › winged helix domain › Penicillinase_R 0.73 60.0 4.71e-01 100.0% 44.3%
4432991 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.71 58.0 3.50e-01 100.0% 25.4%
3264072 101.1.1.70 alpha arrays › HTH › HTH › Three-helical HTH › SANT_DAMP1_like 0.71 61.0 4.75e-01 100.0% 64.5%
3455407 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.71 58.0 5.66e-01 97.9% 90.9%
3178452 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.71 59.0 5.45e-01 97.9% 72.3%
3676556 101.1.1.250 alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-binding_2 0.71 61.0 5.43e-01 100.0% 68.6%
5033536 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.70 57.0 4.59e-01 100.0% 47.3%
4218571 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.70 59.0 5.67e-01 97.9% 92.7%
2897 101.1.17.2 alpha arrays › HTH › HTH › FF domain › FF 0.69 57.0 5.19e-01 100.0% 74.3%
2388330 101.1.2.25 alpha arrays › HTH › HTH › winged helix domain › FUR 0.69 56.0 4.23e-01 100.0% 37.8%
3264673 101.1.2.498 alpha arrays › HTH › HTH › winged helix domain › PF25870 0.69 58.0 4.32e-01 100.0% 75.4%
4162559 101.1.1.3 alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-binding 0.69 58.0 5.63e-01 100.0% 89.1%
4371007 101.11.1.1 alpha arrays › HTH › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › PNPase 0.68 56.0 4.83e-01 100.0% 77.6%
5064866 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.68 57.0 4.48e-01 100.0% 44.5%
4945903 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.67 56.0 5.43e-01 100.0% 89.1%
3640032 101.1.3.9 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › Myb_DNA-bind_8 0.67 56.0 5.42e-01 100.0% 90.9%
4446563 101.1.2.318 alpha arrays › HTH › HTH › winged helix domain › HSD3 0.67 55.0 5.21e-01 100.0% 86.7%
3825757 101.35.1.23 alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › Ovate 0.67 56.0 5.19e-01 100.0% 83.1%
3791697 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.67 54.0 5.27e-01 100.0% 85.5%
3836454 101.1.1.3 alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-binding 0.66 55.0 5.22e-01 100.0% 78.3%
3810810 101.1.1.50 alpha arrays › HTH › HTH › Three-helical HTH › Nop16 0.66 55.0 5.36e-01 97.9% 88.7%
3489209 101.1.10.33 alpha arrays › HTH › HTH › Cyclin-like › Rrn7_cyclin_C 0.66 52.0 4.23e-01 95.8% 44.8%
5048987 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.65 54.0 5.24e-01 100.0% 98.1%
2073547 621.1.1.2 alpha bundles › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Smg8_Smg9 0.64 53.0 4.92e-01 100.0% 87.7%
4956322 2006.1.1.0 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like 0.64 51.0 3.43e-01 93.8% 22.3%
3601831 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.64 53.0 4.69e-01 100.0% 86.7%
3261856 101.1.1.50 alpha arrays › HTH › HTH › Three-helical HTH › Nop16 0.64 52.0 4.86e-01 100.0% 86.2%
3709674 101.1.1.50 alpha arrays › HTH › HTH › Three-helical HTH › Nop16 0.63 52.0 4.65e-01 100.0% 86.7%
3000387 101.1.1.50 alpha arrays › HTH › HTH › Three-helical HTH › Nop16 0.62 51.0 4.97e-01 97.9% 90.6%
3691061 101.1.1.216 alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_8 0.62 49.0 4.76e-01 95.8% 90.9%
3623357 101.1.10.0 alpha arrays › HTH › HTH › Cyclin-like 0.61 48.0 4.72e-01 100.0% 89.1%
3588464 604.39.1.5 alpha bundles › Spectrin repeat-like › S-component of energy-coupling factor (ECF) transporters › S-component of energy-coupling factor (ECF) transporters › ECF_trnsprt 0.60 50.0 3.49e-01 97.9% 67.6%
3686518 101.1.2.384 alpha arrays › HTH › HTH › winged helix domain › Myb_DNA-bind_8 0.60 47.0 4.58e-01 95.8% 92.7%
5058985 7064.1.1.1 alpha bundles › Transmembrane domain of VIT1 › Transmembrane domain of VIT1 › Transmembrane domain of VIT1 › VIT1 0.55 43.0 3.20e-01 100.0% 51.2%
3971484 5063.1.1.2 alpha bundles › Photosystem I reaction center subunit X, PsaK › Photosystem I reaction center subunit X, PsaK › Photosystem I reaction center subunit X, PsaK › MadL 0.52 37.0 2.82e-01 77.1% 60.9%