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hypothetical_protein_OtV5_051c

Euk-Vir

Ostreococcus_tauri_virus_OtV5

hypothetical_protein_OtV5_051c__YP_001648130__Ostreococcus_tauri_virus_OtV5__1785753

Identity

Accession:
YP_001648130 ↗
Protein ID:
hypothetical_protein_OtV5_051c
Kingdom:
euk

Quality

61.3 mean pLDDT

Taxonomy

Bamfordvirae› Nucleocytoviricota› Megaviricetes› Algavirales› Phycodnaviridae› Prasinovirus› Ostreococcus_tauri_virus_OtV5

TaxID: 1785753

Cluster

View cluster (7 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-87
PDB
Domain cluster: representative
CATH (37)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1a45A01 2.60.20.10 Mainly Beta › Sandwich › Gamma-B Crystallin; domain 1 › Crystallins 0.80 72.0 7.32e-01 100.0% 97.6%
3hz2A00 2.60.20.10 Mainly Beta › Sandwich › Gamma-B Crystallin; domain 1 › Crystallins 0.78 71.0 7.16e-01 98.8% 96.4%
2dadA00 2.60.20.10 Mainly Beta › Sandwich › Gamma-B Crystallin; domain 1 › Crystallins 0.78 70.0 6.75e-01 100.0% 87.1%
3lwkA02 2.60.20.10 Mainly Beta › Sandwich › Gamma-B Crystallin; domain 1 › Crystallins 0.77 72.0 7.03e-01 100.0% 94.5%
2bv2A00 2.60.20.10 Mainly Beta › Sandwich › Gamma-B Crystallin; domain 1 › Crystallins 0.77 71.0 7.19e-01 98.8% 98.8%
1okiA01 2.60.20.10 Mainly Beta › Sandwich › Gamma-B Crystallin; domain 1 › Crystallins 0.77 72.0 7.04e-01 100.0% 92.3%
3hzbC00 2.60.20.10 Mainly Beta › Sandwich › Gamma-B Crystallin; domain 1 › Crystallins 0.75 70.0 6.88e-01 100.0% 96.6%
4psrA03 2.60.20.10 Mainly Beta › Sandwich › Gamma-B Crystallin; domain 1 › Crystallins 0.75 68.0 6.67e-01 100.0% 92.1%
1npsA00 2.60.20.10 Mainly Beta › Sandwich › Gamma-B Crystallin; domain 1 › Crystallins 0.74 69.0 6.82e-01 100.0% 95.5%
1c01A00 2.60.20.30 Mainly Beta › Sandwich › Gamma-B Crystallin; domain 1 › 0.74 60.0 6.27e-01 100.0% 98.7%
4el6A00 2.60.20.10 Mainly Beta › Sandwich › Gamma-B Crystallin; domain 1 › Crystallins 0.73 65.0 6.21e-01 100.0% 84.5%
3enuA00 2.60.20.10 Mainly Beta › Sandwich › Gamma-B Crystallin; domain 1 › Crystallins 0.73 66.0 5.97e-01 100.0% 78.9%
3cw3A00 2.60.20.10 Mainly Beta › Sandwich › Gamma-B Crystallin; domain 1 › Crystallins 0.69 64.0 6.16e-01 100.0% 98.9%
1wktA00 2.60.20.20 Mainly Beta › Sandwich › Gamma-B Crystallin; domain 1 › 0.68 61.0 6.04e-01 100.0% 96.6%
1yhpA01 2.60.20.10 Mainly Beta › Sandwich › Gamma-B Crystallin; domain 1 › Crystallins 0.68 62.0 6.00e-01 100.0% 94.6%
3ujzA03 2.60.20.40 Mainly Beta › Sandwich › Gamma-B Crystallin; domain 1 › 0.68 61.0 5.80e-01 100.0% 92.0%
2kp5A00 2.60.20.10 Mainly Beta › Sandwich › Gamma-B Crystallin; domain 1 › Crystallins 0.67 60.0 5.85e-01 100.0% 92.3%
2q1fA01 2.60.120.430 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding lectin 0.65 55.0 4.44e-01 95.2% 79.0%
6fzvD01 2.60.120.290 Mainly Beta › Sandwich › Jelly Rolls › Spermadhesin, CUB domain 0.64 54.0 4.88e-01 94.0% 77.1%
7wqxA01 2.60.120.290 Mainly Beta › Sandwich › Jelly Rolls › Spermadhesin, CUB domain 0.61 52.0 4.80e-01 94.0% 82.1%
4qpwA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.60 50.0 4.29e-01 94.0% 88.0%
1nqjB00 2.60.120.380 Mainly Beta › Sandwich › Jelly Rolls › 0.57 48.0 4.41e-01 95.2% 71.9%
2zxqA03 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.57 44.0 3.58e-01 86.9% 64.2%
3n40P04 2.60.40.2400 Mainly Beta › Sandwich › Immunoglobulin-like › Alphavirus E2 glycoprotein, domain C 0.57 39.0 4.13e-01 100.0% 83.6%
3k8uA01 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.56 39.0 3.37e-01 72.6% 57.3%
3loiA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.55 48.0 3.92e-01 97.6% 61.3%
1wkyA02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.54 44.0 3.84e-01 95.2% 85.4%
1su4A01 2.70.150.10 Mainly Beta › Distorted Sandwich › Calcium-transporting ATPase, cytoplasmic transduction domain A › Calcium-transporting ATPase, cytoplasmic transduction domain A 0.54 45.0 3.68e-01 94.0% 84.6%
3besR01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 40.0 4.04e-01 100.0% 80.7%
4h7lB00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.54 43.0 3.95e-01 100.0% 65.8%
2eixA01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.53 39.0 3.72e-01 81.0% 99.1%
5u55A02 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.53 46.0 4.10e-01 97.6% 68.9%
7zxkB01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 39.0 4.07e-01 100.0% 87.3%
5mj6A03 2.60.40.1910 Mainly Beta › Sandwich › Immunoglobulin-like › 0.52 41.0 4.16e-01 100.0% 90.0%
3wcyA04 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 40.0 3.97e-01 98.8% 80.2%
4mjjA00 2.60.40.150 Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain 0.51 41.0 3.75e-01 90.5% 83.6%
1ktbA02 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.50 42.0 4.14e-01 96.4% 96.7%
ECOD (49)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3860538 72.1.1.1 ↗ beta sandwiches › gamma-Crystallin-like › gamma-Crystallin-like › gamma-Crystallin-like › Crystall 0.80 76.0 7.10e-01 100.0% 85.0%
3184728 72.1.1.0 ↗ beta sandwiches › gamma-Crystallin-like › gamma-Crystallin-like › gamma-Crystallin-like 0.80 70.0 7.21e-01 100.0% 98.8%
3191749 72.1.1.0 ↗ beta sandwiches › gamma-Crystallin-like › gamma-Crystallin-like › gamma-Crystallin-like 0.79 68.0 7.01e-01 100.0% 98.7%
3675212 72.1.1.5 ↗ beta sandwiches › gamma-Crystallin-like › gamma-Crystallin-like › gamma-Crystallin-like › MiAMP1 0.76 62.0 6.48e-01 100.0% 98.7%
5051485 72.1.1.0 ↗ beta sandwiches › gamma-Crystallin-like › gamma-Crystallin-like › gamma-Crystallin-like 0.76 70.0 6.65e-01 100.0% 95.9%
4013269 72.1.1.0 ↗ beta sandwiches › gamma-Crystallin-like › gamma-Crystallin-like › gamma-Crystallin-like 0.75 68.0 6.71e-01 98.8% 96.6%
134238 72.1.1.3 ↗ beta sandwiches › gamma-Crystallin-like › gamma-Crystallin-like › gamma-Crystallin-like › Crystall_3 0.73 67.0 5.93e-01 100.0% 76.9%
3184038 72.1.1.0 ↗ beta sandwiches › gamma-Crystallin-like › gamma-Crystallin-like › gamma-Crystallin-like 0.70 60.0 6.04e-01 98.8% 97.6%
3723796 72.1.1.0 ↗ beta sandwiches › gamma-Crystallin-like › gamma-Crystallin-like › gamma-Crystallin-like 0.70 63.0 6.15e-01 100.0% 95.6%
3725294 72.1.1.0 ↗ beta sandwiches › gamma-Crystallin-like › gamma-Crystallin-like › gamma-Crystallin-like 0.69 61.0 5.89e-01 100.0% 87.4%
2051 72.1.1.6 ↗ beta sandwiches › gamma-Crystallin-like › gamma-Crystallin-like › gamma-Crystallin-like › Yeast-kill-tox 0.68 61.0 6.04e-01 100.0% 96.6%
3843097 10.4.1.1 ↗ beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB 0.68 53.0 4.69e-01 84.5% 67.2%
3523098 10.4.1.1 ↗ beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB 0.68 43.0 3.69e-01 90.5% 40.7%
4650155 10.4.1.1 ↗ beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB 0.67 53.0 4.76e-01 84.5% 78.1%
4195314 10.4.1.1 ↗ beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB 0.67 52.0 4.80e-01 84.5% 80.0%
5012588 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.65 48.0 4.97e-01 82.1% 83.7%
4615128 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.64 55.0 4.53e-01 95.2% 82.0%
3222246 10.4.1.0 ↗ beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain 0.62 48.0 4.42e-01 84.5% 76.4%
3201372 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.62 46.0 4.36e-01 82.1% 83.8%
3243005 10.32.1.227 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Glycoprotein 0.61 51.0 4.42e-01 95.2% 85.2%
3960302 11.1.1.47 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CBM_48 0.61 43.0 3.66e-01 97.6% 44.3%
4017006 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.61 51.0 4.33e-01 95.2% 92.4%
2605261 10.5.1.0 ↗ beta sandwiches › jelly-roll › Viral protein domain › Viral protein domain 0.60 51.0 4.60e-01 94.0% 81.9%
3710431 10.12.1.0 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix 0.60 51.0 4.96e-01 92.9% 83.2%
3219057 10.32.1.308 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › CUB_M02D8_5_7th 0.60 51.0 4.64e-01 95.2% 79.1%
3999000 10.7.1.0 ↗ beta sandwiches › jelly-roll › Hypothetical protein TM1070 › Hypothetical protein TM1070 0.60 43.0 4.30e-01 76.2% 76.5%
3799293 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.59 50.0 4.19e-01 94.0% 80.7%
3230185 10.32.1.227 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Glycoprotein 0.59 49.0 4.57e-01 94.0% 76.4%
4013577 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.59 48.0 3.96e-01 94.0% 76.5%
3285910 10.32.1.2 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › F5_F8_type_C 0.58 48.0 4.09e-01 92.9% 86.2%
3595486 10.13.1.0 ↗ beta sandwiches › jelly-roll › Calcium ATPase, transduction domain A › Calcium ATPase, transduction domain A 0.58 48.0 3.86e-01 92.9% 84.0%
3561132 2006.1.1.0 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like 0.58 47.0 2.87e-01 91.7% 36.3%
3225227 10.4.1.1 ↗ beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB 0.58 48.0 4.55e-01 94.0% 82.9%
3561958 10.4.1.1 ↗ beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB 0.58 52.0 4.57e-01 100.0% 79.2%
3230786 10.4.1.0 ↗ beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain 0.58 41.0 4.11e-01 75.0% 88.2%
4027937 10.13.1.0 ↗ beta sandwiches › jelly-roll › Calcium ATPase, transduction domain A › Calcium ATPase, transduction domain A 0.57 46.0 3.78e-01 91.7% 88.8%
3499526 2006.1.1.0 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like 0.57 46.0 2.82e-01 91.7% 37.0%
3579853 10.4.1.0 ↗ beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain 0.57 47.0 4.25e-01 94.0% 71.7%
3217206 10.4.1.0 ↗ beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain 0.57 49.0 4.53e-01 96.4% 83.6%
3924093 10.4.1.33 ↗ beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB_M02D8_5_3rd 0.57 50.0 4.48e-01 100.0% 84.2%
3226168 11.1.1.2 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 0.56 42.0 3.99e-01 100.0% 68.0%
3388184 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.55 46.0 4.44e-01 96.4% 81.6%
3924473 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.55 45.0 3.59e-01 94.0% 73.7%
2822348 10.13.1.1 ↗ beta sandwiches › jelly-roll › Calcium ATPase, transduction domain A › Calcium ATPase, transduction domain A › E1-E2_ATPase 0.55 39.0 3.94e-01 94.0% 75.0%
2790612 10.3.1.1 ↗ beta sandwiches › jelly-roll › TNF-like › TNF-like › TNF 0.53 45.0 4.03e-01 94.0% 84.7%
4342482 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.53 43.0 4.18e-01 91.7% 91.6%
4662228 10.12.1.39 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 0.52 46.0 4.00e-01 100.0% 65.4%
5033992 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.51 44.0 4.03e-01 100.0% 84.3%
3944546 11.1.1.47 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CBM_48 0.50 41.0 3.59e-01 98.8% 58.5%
D2 medium residues 95-186
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF19082.6 best DUF5773 38.7 1.70e-09 76.1% 24.3%
CATH (7)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5cwhA01 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.69 55.0 4.64e-01 85.9% 69.9%
2a9uA01 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.61 44.0 3.92e-01 75.0% 61.1%
4dloB02 1.25.40.610 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.59 50.0 4.64e-01 94.6% 97.4%
1fbwA01 1.50.10.10 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › 0.57 49.0 3.24e-01 100.0% 56.9%
4ga0A00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.55 44.0 3.87e-01 93.5% 57.3%
3n00A00 1.10.565.10 Mainly Alpha › Orthogonal Bundle › Retinoid X Receptor › Retinoid X Receptor 0.55 41.0 3.28e-01 79.3% 83.7%
4huqA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.51 44.0 3.18e-01 100.0% 68.0%
ECOD (10)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3285752 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.63 56.0 4.78e-01 100.0% 90.0%
4975759 101.1.2.136 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.58 46.0 3.69e-01 88.0% 84.7%
3723226 226.1.1.0 ↗ a+b two layers › POZ domain › POZ domain › POZ domain 0.57 45.0 3.97e-01 85.9% 100.0%
3218024 109.4.1.1651 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_8, TPR_EMC2 0.56 44.0 3.61e-01 85.9% 52.6%
5051389 109.4.1.207 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HEAT_2 0.56 44.0 4.07e-01 94.6% 64.8%
3335807 109.4.1.1382 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_3, TPR_24 0.55 46.0 3.55e-01 97.8% 61.3%
3956597 213.1.1.0 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) 0.55 43.0 3.15e-01 85.9% 44.6%
None — 0.54 43.0 3.14e-01 91.3% 29.1%
3730853 5.1.4.223 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_RIC1_2nd 0.53 46.0 2.67e-01 97.8% 22.3%
5010136 316.1.1.0 ↗ a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase 0.52 42.0 3.47e-01 92.4% 74.1%
D3 medium residues 189-235_247-284
PDB