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hypothetical_protein_PGCG_00004
Euk-VirPhaeocystis_globosa_virus
hypothetical_protein_PGCG_00004__YP_008052323__Phaeocystis_globosa_virus__251749
Identity
- Accession:
- YP_008052323 ↗
- Protein ID:
- hypothetical_protein_PGCG_00004
- Kingdom:
- euk
Quality
51.7
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Megaviricetes›
Algavirales›
Phycodnaviridae›
Prymnesiovirus›
Phaeocystis_globosa_virus
TaxID: 251749
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 1-94
D2
high
residues 121-169
Domain cluster:
representative
CATH (17)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4p0dA02 | 2.60.40.740 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.68 | 50.0 | 3.41e-01 | 95.9% | 22.9% |
| 2p38A01 | 3.10.450.220 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.65 | 53.0 | 4.53e-01 | 100.0% | 84.4% |
| 3tvkA00 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.58 | 39.0 | 2.76e-01 | 71.4% | 79.1% |
| 3tvjB02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.56 | 41.0 | 3.37e-01 | 83.7% | 75.7% |
| 1n7vA01 | 2.105.10.10 | Mainly Beta › 3 Propeller › Pseudo beta propeller › Pseudo beta propeller | 0.56 | 48.0 | 3.34e-01 | 100.0% | 50.3% |
| 2zxqA01 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.56 | 44.0 | 2.80e-01 | 89.8% | 33.6% |
| 4rmoA00 | 3.10.129.130 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › | 0.56 | 45.0 | 3.36e-01 | 100.0% | 92.9% |
| 7c9rH01 | 3.90.50.10 | Alpha Beta › Alpha-Beta Complex › Photosynthetic Reaction Center; Chain H, domain 2 › Photosynthetic Reaction Center, subunit H, domain 2 | 0.56 | 42.0 | 3.02e-01 | 83.7% | 48.6% |
| 1jeyA02 | 2.40.290.10 | Mainly Beta › Beta Barrel › Ku70; Chain: A; Domain 2 › | 0.54 | 44.0 | 3.39e-01 | 98.0% | 90.5% |
| 5mghA01 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.54 | 42.0 | 2.66e-01 | 93.9% | 24.1% |
| 1d3bC00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.53 | 44.0 | 3.97e-01 | 95.9% | 73.2% |
| 1h12A00 | 1.50.10.10 | Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › | 0.53 | 42.0 | 2.57e-01 | 100.0% | 21.5% |
| 4bt2A01 | 3.30.1330.80 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Hypothetical protein, similar to alpha- acetolactate decarboxylase; domain 2 | 0.52 | 37.0 | 2.90e-01 | 95.9% | 32.5% |
| 7q5yD01 | 3.30.70.3270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.52 | 42.0 | 3.19e-01 | 91.8% | 37.2% |
| 2x0qA01 | 3.30.310.280 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › | 0.52 | 40.0 | 3.08e-01 | 91.8% | 36.1% |
| 1pcfA00 | 2.30.31.10 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A | 0.51 | 39.0 | 3.68e-01 | 93.9% | 87.9% |
| 1gteA04 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.50 | 42.0 | 3.06e-01 | 100.0% | 55.6% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3625628 | 391.1.1.7 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module › Fn1_2 | 0.64 | 50.0 | 4.37e-01 | 100.0% | 57.3% |
| 3225894 | 391.1.2.0 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › VWC domain-related | 0.60 | 47.0 | 3.95e-01 | 100.0% | 50.6% |
| 3781121 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.56 | 48.0 | 2.93e-01 | 100.0% | 31.1% |
| 3826594 | 5.1.3.65 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › DUF295 | 0.55 | 45.0 | 2.88e-01 | 100.0% | 32.1% |
| 2705754 | 389.1.1.12 ↗ | few secondary structure elements › EGF-like › EGF-related › EGF/Laminin › FOLN | 0.53 | 30.0 | 3.37e-01 | 95.9% | 88.0% |
| 3614687 | 7525.1.1.2 ↗ | a/b three-layered sandwiches › Phosphoglycerate mutase-like › Phosphoglycerate mutase-like › Phosphoglycerate mutase-like › His_Phos_2 | 0.52 | 44.0 | 2.64e-01 | 100.0% | 29.9% |
| 4504072 | 6020.1.1.1 ↗ | a+b two layers › Beta domain of DivIB/FtsQ › Beta domain of DivIB/FtsQ › Beta domain of DivIB/FtsQ › FtsQ_DivIB_C | 0.52 | 42.0 | 3.10e-01 | 89.8% | 54.4% |
| 4540843 | 4.1.1.434 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF2642 | 0.52 | 39.0 | 3.71e-01 | 93.9% | 67.7% |
| 4613074 | 6020.1.1.1 ↗ | a+b two layers › Beta domain of DivIB/FtsQ › Beta domain of DivIB/FtsQ › Beta domain of DivIB/FtsQ › FtsQ_DivIB_C | 0.52 | 41.0 | 3.04e-01 | 89.8% | 55.4% |