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hypothetical_protein_PGCG_00022
Euk-VirPhaeocystis_globosa_virus
hypothetical_protein_PGCG_00022__YP_008052341__Phaeocystis_globosa_virus__251749
Identity
- Accession:
- YP_008052341 ↗
- Protein ID:
- hypothetical_protein_PGCG_00022
- Kingdom:
- euk
Quality
90.2
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Megaviricetes›
Algavirales›
Phycodnaviridae›
Prymnesiovirus›
Phaeocystis_globosa_virus
TaxID: 251749
Cluster
View cluster (18 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-52
Domain cluster:
representative
D2
medium
residues 53-119
Domain cluster:
rep: hypothetical_protein_H012_gp607__YP_007354292__Acanthamoeba_polyphaga_moumouvirus__1269028__D142-194
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF19064.7 best | DUF5760 | 66.5 | 2.70e-18 | 98.5% | 74.4% |
CATH (13)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1p1hB01 | 3.30.2360.10 | Alpha Beta › 2-Layer Sandwich › Glyceraldehyde-3-phosphate dehydrogenase-like fold › Glyceraldehyde-3-phosphate dehydrogenase-like domain | 0.77 | 50.0 | 3.65e-01 | 100.0% | 25.6% |
| 4jrnA02 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.72 | 35.0 | 2.74e-01 | 100.0% | 21.3% |
| 3n3wA00 | 1.10.1520.10 | Mainly Alpha › Orthogonal Bundle › Ribonuclease iii, N-terminal Endonuclease Domain; Chain A › Ribonuclease III domain | 0.68 | 49.0 | 3.77e-01 | 74.6% | 50.0% |
| 1uhvA01 | 2.60.40.1500 | Mainly Beta › Sandwich › Immunoglobulin-like › Glycosyl hydrolase domain; family 39 | 0.60 | 46.0 | 3.56e-01 | 83.6% | 37.8% |
| 3f2bA05 | 6.10.50.10 | Special › Helix non-globular › Insulin-like, subunit E › | 0.58 | 39.0 | 4.34e-01 | 71.6% | 100.0% |
| 1vi7A01 | 3.30.230.30 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › Impact, N-terminal domain | 0.57 | 39.0 | 3.14e-01 | 70.1% | 99.3% |
| 2jfrA00 | 3.60.40.10 | Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain | 0.55 | 37.0 | 2.55e-01 | 70.1% | 98.7% |
| 7b9cA02 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.54 | 45.0 | 2.93e-01 | 100.0% | 44.9% |
| 3u4qA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.54 | 40.0 | 2.80e-01 | 79.1% | 99.6% |
| 2jgpA03 | 3.30.559.30 | Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Nonribosomal peptide synthetase, condensation domain | 0.54 | 34.0 | 2.40e-01 | 89.6% | 18.5% |
| 4c23B02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.54 | 42.0 | 2.98e-01 | 88.1% | 91.5% |
| 1vk3A02 | 3.30.1330.10 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › PurM-like, N-terminal domain | 0.51 | 35.0 | 2.87e-01 | 73.1% | 74.8% |
| 3vc1J00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.51 | 35.0 | 2.37e-01 | 73.1% | 19.2% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4346496 | 230.1.1.5 ↗ | a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › GCHY-1 | 0.61 | 49.0 | 3.74e-01 | 92.5% | 36.6% |
| 4663348 | 12.1.1.1 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Glyco_hydro_39 | 0.59 | 45.0 | 3.45e-01 | 83.6% | 36.5% |
| 3559191 | 1086.1.1.0 ↗ | beta meanders › C-terminal beta-hairpin in astrotactin-2 › C-terminal beta-hairpin in astrotactin-2 › C-terminal beta-hairpin in astrotactin-2 | 0.59 | 42.0 | 4.51e-01 | 92.5% | 94.5% |
| 4978574 | 230.1.1.5 ↗ | a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › GCHY-1 | 0.58 | 46.0 | 3.58e-01 | 92.5% | 79.4% |
| 3276506 | 244.1.1.11 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C › SE | 0.55 | 41.0 | 2.58e-01 | 86.6% | 35.9% |
| 3863804 | 5.1.4.17 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CPSF_A,MMS1_N | 0.54 | 44.0 | 2.59e-01 | 100.0% | 21.4% |
| 3929065 | 872.1.1.0 ↗ | a+b two layers › Dodecin subunit-like › Flavin-binding protein dodecin-like › Flavin-binding protein dodecin-like | 0.54 | 40.0 | 4.27e-01 | 86.6% | 100.0% |