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hypothetical_protein_PGCG_00284
Euk-VirPhaeocystis_globosa_virus
hypothetical_protein_PGCG_00284__YP_008052602__Phaeocystis_globosa_virus__251749
Identity
- Accession:
- YP_008052602 ↗
- Protein ID:
- hypothetical_protein_PGCG_00284
- Kingdom:
- euk
Quality
51.2
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Megaviricetes›
Algavirales›
Phycodnaviridae›
Prymnesiovirus›
Phaeocystis_globosa_virus
TaxID: 251749
Cluster
View cluster (2 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 71-129
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02037.34 best | SAP | 34.1 | 2.30e-08 | 54.2% | 83.8% |
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3n5lA03 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.82 | 47.0 | 4.86e-01 | 86.4% | 59.6% |
| 3vbbE01 | 1.10.287.40 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain | 0.75 | 58.0 | 4.61e-01 | 84.7% | 61.3% |
| 3qo8A01 | 1.10.287.40 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain | 0.74 | 57.0 | 4.69e-01 | 83.1% | 56.6% |
| 4wv4B00 | 1.10.20.10 | Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A | 0.71 | 53.0 | 4.53e-01 | 79.7% | 58.1% |
ECOD (18)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3372994 | 130.1.1.1 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif › SAP | 0.94 | 67.0 | 7.00e-01 | 76.3% | 80.0% |
| 4263826 | 130.1.1.0 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif | 0.92 | 63.0 | 5.94e-01 | 74.6% | 60.0% |
| 4565026 | 130.1.1.1 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif › SAP | 0.92 | 62.0 | 5.63e-01 | 71.2% | 54.7% |
| 3253225 | 130.1.1.1 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif › SAP | 0.88 | 65.0 | 5.69e-01 | 78.0% | 54.1% |
| 3257421 | 130.1.1.0 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif | 0.88 | 72.0 | 6.80e-01 | 94.9% | 74.3% |
| None | — | 0.88 | 64.0 | 4.26e-01 | 78.0% | 22.0% | |
| 3994610 | 130.1.1.0 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif | 0.86 | 66.0 | 6.36e-01 | 83.1% | 72.3% |
| 3930571 | 130.1.1.0 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif | 0.86 | 75.0 | 7.10e-01 | 98.3% | 81.4% |
| 3272244 | 130.1.1.0 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif | 0.85 | 73.0 | 6.84e-01 | 94.9% | 77.1% |
| 3496288 | 130.1.1.1 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif › SAP | 0.83 | 70.0 | 6.80e-01 | 96.6% | 83.1% |
| 3483114 | 192.8.1.0 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain | 0.83 | 68.0 | 5.99e-01 | 91.5% | 62.4% |
| 3583564 | 130.1.1.1 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif › SAP | 0.82 | 55.0 | 5.19e-01 | 72.9% | 58.6% |
| 3705227 | 130.1.1.0 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif | 0.76 | 64.0 | 5.82e-01 | 94.9% | 100.0% |
| 3596488 | 3737.1.1.0 ↗ | alpha duplicates or obligate multimers › Major allergen Bla g 1 tandem repeats › Major allergen Bla g 1 tandem repeats › Major allergen Bla g 1 tandem repeats | 0.74 | 55.0 | 4.32e-01 | 81.4% | 57.6% |
| 4584784 | 4993.1.1.3 ↗ | extended segments › Glu-tRNAGln amidotransferase C subunit › Glu-tRNAGln amidotransferase C subunit › Glu-tRNAGln amidotransferase C subunit › GatF | 0.65 | 45.0 | 3.50e-01 | 72.9% | 33.1% |
| 4087978 | 4993.1.1.0 ↗ | extended segments › Glu-tRNAGln amidotransferase C subunit › Glu-tRNAGln amidotransferase C subunit › Glu-tRNAGln amidotransferase C subunit | 0.62 | 45.0 | 3.86e-01 | 78.0% | 46.0% |
| 4540189 | 4993.1.1.3 ↗ | extended segments › Glu-tRNAGln amidotransferase C subunit › Glu-tRNAGln amidotransferase C subunit › Glu-tRNAGln amidotransferase C subunit › GatF | 0.62 | 43.0 | 3.79e-01 | 72.9% | 48.9% |
| 4375209 | 4993.1.1.3 ↗ | extended segments › Glu-tRNAGln amidotransferase C subunit › Glu-tRNAGln amidotransferase C subunit › Glu-tRNAGln amidotransferase C subunit › GatF | 0.62 | 45.0 | 3.55e-01 | 78.0% | 36.8% |
D2
medium
residues 226-363