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hypothetical_protein_PGCG_00351
Euk-VirPhaeocystis_globosa_virus
hypothetical_protein_PGCG_00351__YP_008052669__Phaeocystis_globosa_virus__251749
Identity
- Accession:
- YP_008052669 ↗
- Protein ID:
- hypothetical_protein_PGCG_00351
- Kingdom:
- euk
Quality
68.3
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Megaviricetes›
Algavirales›
Phycodnaviridae›
Prymnesiovirus›
Phaeocystis_globosa_virus
TaxID: 251749
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 62-174
Domain cluster:
rep: hypothetical_protein_PGCG_00352__YP_008052670__Phaeocystis_globosa_virus__251749__D39-138
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2jqqA00 | 1.20.58.1240 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.66 | 57.0 | 5.17e-01 | 97.3% | 69.5% |
| 3beeA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.60 | 37.0 | 4.03e-01 | 98.2% | 74.7% |
| 4bujE03 | 1.10.3380.30 | Mainly Alpha › Orthogonal Bundle › Sec63 N-terminal domain-like fold › | 0.59 | 44.0 | 3.53e-01 | 77.0% | 99.1% |
| 1yw0A00 | 1.20.58.480 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.59 | 52.0 | 4.08e-01 | 97.3% | 77.8% |
| 3zilA00 | 1.25.10.60 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Rad61, Wapl domain | 0.57 | 51.0 | 3.58e-01 | 100.0% | 34.5% |
| 2f33A01 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.54 | 31.0 | 3.84e-01 | 79.6% | 91.5% |
| 3bulA01 | 1.10.1240.10 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Methionine synthase domain | 0.52 | 37.0 | 4.04e-01 | 100.0% | 94.3% |
| 5cqgA05 | 1.10.357.90 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Telomerase reverse transcriptase (TERT), thumb domain | 0.52 | 43.0 | 3.72e-01 | 92.9% | 88.4% |
| 3d3mA00 | 1.25.40.180 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.51 | 42.0 | 3.82e-01 | 100.0% | 64.6% |
| 1ny9A00 | 1.10.490.50 | Mainly Alpha › Orthogonal Bundle › Globin-like › Antibiotic binding domain of TipA-like multidrug resistance regulators | 0.51 | 39.0 | 4.26e-01 | 93.8% | 100.0% |
ECOD (13)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3784983 | 109.2.1.12 ↗ | alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid › Glyco_hydro_65m | 0.66 | 60.0 | 3.99e-01 | 100.0% | 32.6% |
| 3349393 | 109.4.1.420 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR | 0.65 | 41.0 | 4.15e-01 | 100.0% | 61.7% |
| 3750624 | 109.4.1.372 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › ECSIT_N | 0.64 | 47.0 | 4.41e-01 | 100.0% | 63.7% |
| 3311680 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.63 | 57.0 | 4.52e-01 | 99.1% | 59.1% |
| 3796308 | 109.4.1.372 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › ECSIT_N | 0.63 | 45.0 | 3.79e-01 | 100.0% | 44.2% |
| 4199922 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.59 | 49.0 | 4.73e-01 | 89.4% | 90.0% |
| 4937823 | 3558.1.1.0 ↗ | alpha arrays › HSDR subunit helical domain › HSDR subunit helical domain › HSDR subunit helical domain | 0.58 | 44.0 | 4.62e-01 | 78.8% | 98.0% |
| None | — | 0.57 | 50.0 | 3.22e-01 | 100.0% | 23.3% | |
| 4026326 | 2006.1.2.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › DHH phosphoesterases › DHH | 0.56 | 51.0 | 3.81e-01 | 100.0% | 88.9% |
| 3577300 | 101.1.2.352 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_Tnp_Tc5 | 0.52 | 29.0 | 3.42e-01 | 88.5% | 80.0% |
| 4194934 | 109.4.1.514 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Vps54 | 0.52 | 45.0 | 2.88e-01 | 100.0% | 28.3% |
| 3740246 | 109.4.1.61 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Sec15_C | 0.51 | 45.0 | 3.56e-01 | 100.0% | 60.5% |
| 3473426 | 109.4.1.372 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › ECSIT_N | 0.51 | 46.0 | 4.10e-01 | 100.0% | 71.9% |