hypothetical_protein_PYVVs2_gp2

Euk-Vir

Potato_yellow_vein_virus

hypothetical_protein_PYVVs2_gp2__YP_054418__Potato_yellow_vein_virus__103881

Identity

77.1 mean pLDDT

Orthornavirae› Kitrinoviricota› Alsuviricetes› Martellivirales› Closteroviridae› Crinivirus› Potato_yellow_vein_virus

TaxID: 103881

Singleton — not in a non-trivial cluster

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high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 7-54

PDB

Domain cluster: representative

CATH (5)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3jr7A02	2.20.28.50	Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › DegV, N-terminal domain, peripheral subdomain	0.63	44.0	4.67e-01	87.5%	94.7%
1fjjA00	3.90.280.10	Alpha Beta › Alpha-Beta Complex › Phosphatidylethanolamine-binding Protein › PEBP-like	0.60	52.0	3.63e-01	100.0%	67.3%
3k2tA01	3.30.505.50	Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › Sigma 54 modulation/S30EA ribosomal protein, C-terminal domain	0.57	34.0	3.46e-01	100.0%	58.7%
2i0kA03	3.40.462.10	Alpha Beta › 3-Layer(aba) Sandwich › Vanillyl-alcohol Oxidase; Chain A, domain 3 › FAD-linked oxidases, C-terminal domain	0.56	43.0	2.77e-01	87.5%	46.1%
1y96A00	2.30.30.100	Mainly Beta › Roll › SH3 type barrels. ›	0.51	34.0	2.91e-01	70.8%	88.4%

ECOD (9)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4028660	252.2.1.0 ↗	a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like	0.63	36.0	3.51e-01	100.0%	49.1%
4804226	9.1.1.11 ↗	beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin_2	0.59	41.0	3.69e-01	72.9%	60.3%
3479395	64.1.1.0 ↗	beta meanders › WW domain-like › WW domain › WW domain	0.58	34.0	3.78e-01	100.0%	81.8%
3468853	4.1.1.0 ↗	beta barrels › SH3 › SH3 › SH3	0.57	35.0	3.79e-01	100.0%	82.9%
3383054	221.1.2.20 ↗	a+b two layers › beta-Grasp › Ubiquitin-related › Alpha-L RNA-binding motif › Ribosomal_S4e	0.54	32.0	3.54e-01	100.0%	77.1%
3715091	64.1.1.0 ↗	beta meanders › WW domain-like › WW domain › WW domain	0.52	32.0	2.91e-01	100.0%	41.5%
4029987	210.2.1.1 ↗	a+b four layers › Ntn/PP2C › Protein serine/threonine phosphatase 2C, catalytic domain › Protein serine/threonine phosphatase 2C, catalytic domain › PP2C	0.51	40.0	2.48e-01	91.7%	92.1%
4945181	3651.1.1.1 ↗	alpha bundles › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › IF-2B	0.51	42.0	3.20e-01	97.9%	98.5%
3480321	101.1.1.0 ↗	alpha arrays › HTH › HTH › Three-helical HTH	0.50	38.0	3.29e-01	91.7%	51.9%