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hypothetical_protein_PmNV_037
Euk-VirPenaeus_monodon_nudivirus
hypothetical_protein_PmNV_037__YP_009051875__Penaeus_monodon_nudivirus__1529056
Identity
- Accession:
- YP_009051875 ↗
- Protein ID:
- hypothetical_protein_PmNV_037
- Kingdom:
- euk
Quality
74.4
mean pLDDT
Taxonomy
TaxID: 1529056
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-62
Domain cluster:
representative
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2p1aB01 | 1.20.120.450 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › dinb family like domain | 0.68 | 48.0 | 3.59e-01 | 75.0% | 87.0% |
| 5svlA01 | 1.10.287.940 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › atp-gated p2x4 ion channel | 0.64 | 44.0 | 4.24e-01 | 100.0% | 63.2% |
| 2pmzK00 | 3.90.940.10 | Alpha Beta › Alpha-Beta Complex › Eukaryotic RPB6 RNA polymerase subunit › RNA polymerase subunit, RPB6/omega | 0.63 | 45.0 | 4.04e-01 | 75.0% | 63.4% |
| 1fx3B00 | 3.10.420.10 | Alpha Beta › Roll › Bacterial Protein-export protein SecB › SecB-like | 0.60 | 41.0 | 3.09e-01 | 71.7% | 33.6% |
| 1s9qA00 | 1.10.565.10 | Mainly Alpha › Orthogonal Bundle › Retinoid X Receptor › Retinoid X Receptor | 0.56 | 49.0 | 3.31e-01 | 100.0% | 25.9% |
| 1dj8A00 | 1.10.890.10 | Mainly Alpha › Orthogonal Bundle › 10k-s Protein, Hypothetical Protein A; Chain A › HNS-dependent expression A | 0.56 | 40.0 | 3.69e-01 | 78.3% | 58.2% |
| 2ayaA00 | 3.30.300.150 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › DNA polymerase III, tau subunit, domain V | 0.54 | 42.0 | 3.42e-01 | 100.0% | 42.2% |
| 7kpsB01 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.54 | 45.0 | 3.22e-01 | 93.3% | 60.3% |
| 2lfhA00 | 4.10.280.10 | Few Secondary Structures › Irregular › MYOD Basic-Helix-Loop-Helix Domain, subunit B › Helix-loop-helix DNA-binding domain | 0.54 | 40.0 | 3.88e-01 | 88.3% | 72.1% |
| 2optA02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.52 | 45.0 | 3.47e-01 | 100.0% | 59.0% |