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hypothetical_protein_PnCV_gp2
Euk-VirPoinsettia_latent_virus
hypothetical_protein_PnCV_gp2__YP_002308461__Poinsettia_latent_virus__305785
Identity
- Accession:
- YP_002308461 ↗
- Protein ID:
- hypothetical_protein_PnCV_gp2
- Kingdom:
- euk
Quality
59.8
mean pLDDT
Taxonomy
Orthornavirae›
Pisuviricota›
Pisoniviricetes›
Sobelivirales›
Solemoviridae›
Polemovirus›
Poinsettia_latent_virus
TaxID: 305785
Cluster
View cluster (30 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 231-401
Domain cluster:
rep: 100_kDa_protein__YP_008130303__Citrus_vein_enation_virus__1301220__D379-571
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02122.22 best | Peptidase_S39 | 218.8 | 8.20e-65 | 100.0% | 84.7% |
D2
medium
residues 105-184
Domain cluster:
representative
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3onjA00 | 1.20.58.400 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › t-snare proteins | 0.71 | 50.0 | 4.67e-01 | 72.5% | 63.9% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4216519 | 2003.1.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains | 0.80 | 73.0 | 4.98e-01 | 100.0% | 32.1% |
| 3585753 | 142.1.1.0 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors | 0.63 | 43.0 | 4.24e-01 | 72.5% | 63.3% |
| 3236866 | 1135.1.1.3 ↗ | a+b complex topology › Immune Mapped Protein 2 (IMP2) › Immune Mapped Protein 2 (IMP2) › Immune Mapped Protein 2 (IMP2) › CytochromB561_N | 0.60 | 53.0 | 5.01e-01 | 95.0% | 81.1% |