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hypothetical_protein_PsunGV_gp062
Euk-VirPseudalatia_unipuncta_granulovirus
hypothetical_protein_PsunGV_gp062__YP_003422401__Pseudalatia_unipuncta_granulovirus__36355
Identity
- Accession:
- YP_003422401 ↗
- Protein ID:
- hypothetical_protein_PsunGV_gp062
- Kingdom:
- euk
Quality
66.5
mean pLDDT
Taxonomy
TaxID: 36355
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-128
Domain cluster:
rep: MH268168.1__AWY10457.1__PFP1_07__00007__D2-95
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02498.23 best | Bro-N | 69.4 | 4.50e-19 | 88.2% | 97.9% |
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1d4tA00 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.56 | 30.0 | 3.32e-01 | 98.4% | 62.5% |
| 8p2bA01 | 3.90.1010.20 | Alpha Beta › Alpha-Beta Complex › Sufe protein. Chain: A › | 0.55 | 35.0 | 4.15e-01 | 99.2% | 100.0% |
| 2lt1A00 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.53 | 24.0 | 2.91e-01 | 74.8% | 64.0% |
| 4exrA02 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.51 | 21.0 | 2.69e-01 | 100.0% | 62.0% |
ECOD (21)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3163642 | 101.1.9.63 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › Bro-N | 0.85 | 66.0 | 7.07e-01 | 100.0% | 91.8% |
| 1790169 | 101.1.9.7 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › Baculo_PEP_N | 0.83 | 63.0 | 6.86e-01 | 100.0% | 93.4% |
| 4033119 | 101.1.9.63 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › Bro-N | 0.76 | 53.0 | 5.95e-01 | 89.8% | 90.0% |
| 3378706 | 211.1.1.0 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase | 0.70 | 25.0 | 3.14e-01 | 91.3% | 51.2% |
| 4954530 | 101.1.9.143 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › Virulence_RhuM | 0.67 | 57.0 | 5.98e-01 | 95.3% | 100.0% |
| 3661102 | 211.1.1.0 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase | 0.64 | 24.0 | 3.40e-01 | 88.2% | 70.9% |
| 5005640 | 3604.1.1.1 ↗ | a+b two layers › Uncharacterized protein MK0293 C-terminal domain › Uncharacterized protein MK0293 C-terminal domain › Uncharacterized protein MK0293 C-terminal domain › Ni_insertion | 0.61 | 31.0 | 4.09e-01 | 100.0% | 92.3% |
| 4964555 | 3604.1.1.1 ↗ | a+b two layers › Uncharacterized protein MK0293 C-terminal domain › Uncharacterized protein MK0293 C-terminal domain › Uncharacterized protein MK0293 C-terminal domain › Ni_insertion | 0.60 | 31.0 | 4.08e-01 | 100.0% | 95.4% |
| 3883088 | 252.1.1.1 ↗ | a+b two layers › DNA-binding domain › Methyl-CpG-binding domain, MBD › Methyl-CpG-binding domain, MBD › MBD | 0.58 | 30.0 | 3.81e-01 | 96.1% | 87.1% |
| 4944756 | 3604.1.1.0 ↗ | a+b two layers › Uncharacterized protein MK0293 C-terminal domain › Uncharacterized protein MK0293 C-terminal domain › Uncharacterized protein MK0293 C-terminal domain | 0.58 | 29.0 | 3.98e-01 | 99.2% | 100.0% |
| 3912111 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.54 | 29.0 | 3.08e-01 | 98.4% | 56.5% |
| 4459946 | 223.1.1.6 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › dCache_1 | 0.53 | 37.0 | 3.00e-01 | 70.9% | 72.2% |
| 3955467 | 4312.1.1.0 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like | 0.53 | 22.0 | 2.93e-01 | 100.0% | 68.6% |
| 5000121 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.53 | 20.0 | 3.13e-01 | 77.2% | 100.0% |
| 4975236 | 3604.1.1.1 ↗ | a+b two layers › Uncharacterized protein MK0293 C-terminal domain › Uncharacterized protein MK0293 C-terminal domain › Uncharacterized protein MK0293 C-terminal domain › Ni_insertion | 0.53 | 28.0 | 3.65e-01 | 99.2% | 96.9% |
| 3622645 | 4184.1.1.2 ↗ | beta barrels › MFPT repeat › MFPT repeat › MFPT repeat › MFP2b | 0.52 | 23.0 | 2.66e-01 | 99.2% | 50.5% |
| 682 | 4184.1.1.2 ↗ | beta barrels › MFPT repeat › MFPT repeat › MFPT repeat › MFP2b | 0.52 | 23.0 | 2.66e-01 | 99.2% | 50.5% |
| 5001454 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.52 | 31.0 | 3.79e-01 | 74.8% | 98.7% |
| 4369577 | 3604.1.1.1 ↗ | a+b two layers › Uncharacterized protein MK0293 C-terminal domain › Uncharacterized protein MK0293 C-terminal domain › Uncharacterized protein MK0293 C-terminal domain › Ni_insertion | 0.52 | 26.0 | 3.54e-01 | 98.4% | 100.0% |
| 3229102 | 207.1.1.81 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH | 0.52 | 31.0 | 2.53e-01 | 73.2% | 30.4% |
| 3587129 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.51 | 21.0 | 2.83e-01 | 78.7% | 70.8% |
D2
medium
residues 140-216