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hypothetical_protein_RBSDVs7gp1
Euk-VirRice_black_streaked_dwarf_virus
hypothetical_protein_RBSDVs7gp1__NP_620454__Rice_black_streaked_dwarf_virus__10990
Identity
- Accession:
- NP_620454 ↗
- Protein ID:
- hypothetical_protein_RBSDVs7gp1
- Kingdom:
- euk
Quality
66.9
mean pLDDT
Taxonomy
Orthornavirae›
Duplornaviricota›
Resentoviricetes›
Reovirales›
Spinareoviridae›
Fijivirus›
Rice_black_streaked_dwarf_virus
TaxID: 10990
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 34-333
Domain cluster:
rep: structural_protein__YP_001883317__Cypovirus_5__205899__D4-284
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF06503.18 best | DUF1101 | 542.0 | 9.50e-163 | 100.0% | 82.9% |
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1wdeA02 | 3.30.950.10 | Alpha Beta › 2-Layer Sandwich › Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2 › Tetrapyrrole methylase, C-terminal domain | 0.52 | 27.0 | 3.48e-01 | 88.7% | 84.5% |
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 227350 | 3190.1.1.1 ↗ | alpha arrays › Viral structural protein 5 › Viral structural protein 5 › Viral structural protein 5 › VP5 | 0.69 | 61.0 | 6.24e-01 | 92.7% | 96.6% |
| 3621635 | 601.1.2.0 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › I/LWEQ domain (Pfam 01608) | 0.53 | 24.0 | 3.38e-01 | 89.0% | 85.3% |