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hypothetical_protein_RHVP.23
Euk-VirCricetid_gammaherpesvirus_2
hypothetical_protein_RHVP.23__YP_004207859__Cricetid_gammaherpesvirus_2__1605972
Identity
- Accession:
- YP_004207859 ↗
- Protein ID:
- hypothetical_protein_RHVP.23
- Kingdom:
- euk
Quality
80.0
mean pLDDT
Taxonomy
Heunggongvirae›
Peploviricota›
Herviviricetes›
Herpesvirales›
Orthoherpesviridae›
Rhadinovirus›
Cricetid_gammaherpesvirus_2
TaxID: 1605972
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-150
Domain cluster:
rep: tegument_protein_UL88__YP_002608280__Human_herpesvirus_5__10359__D21-114_139-191
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3fbxA00 | 3.60.60.30 | Alpha Beta › 4-Layer Sandwich › Penicillin V Acylase; Chain A › | 0.51 | 41.0 | 2.86e-01 | 85.2% | 65.0% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1489668 | 3936.1.1.1 ↗ | a+b complex topology › Herpesvirus UL21 N-terminal domain › Herpesvirus UL21 N-terminal domain › Herpesvirus UL21 N-terminal domain › Herpes_UL21 | 0.69 | 56.0 | 5.16e-01 | 85.9% | 89.3% |
| 5083831 | 210.1.2.5 ↗ | a+b four layers › Ntn/PP2C › Ntn › Penicillin acylase, catalytic domain › Peptidase_C69 | 0.55 | 44.0 | 3.44e-01 | 85.9% | 89.1% |
| 3291925 | 178.1.1.1 ↗ | alpha arrays › SWIB/MDM2 domain › SWIB/MDM2 domain › SWIB/MDM2 domain › SWIB | 0.53 | 31.0 | 3.88e-01 | 77.9% | 100.0% |
| 3234993 | 210.1.2.6 ↗ | a+b four layers › Ntn/PP2C › Ntn › Penicillin acylase, catalytic domain › Phospholip_B | 0.52 | 42.0 | 2.92e-01 | 85.9% | 62.1% |
D2
medium
residues 180-380
Domain cluster:
rep: tegument_protein_UL88__YP_007969786__Elephantid_betaherpesvirus_1__146015__D138-346
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF04682.18 best | Herpes_BTRF1 | 128.6 | 4.10e-37 | 96.0% | 66.8% |
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1ax8A00 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.52 | 30.0 | 3.55e-01 | 89.6% | 83.1% |