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hypothetical_protein_SPVCVp4
Euk-VirSweet_potato_vein_clearing_virus
hypothetical_protein_SPVCVp4__YP_004300271__Sweet_potato_vein_clearing_virus__995049
Identity
- Accession:
- YP_004300271 ↗
- Protein ID:
- hypothetical_protein_SPVCVp4
- Kingdom:
- euk
Quality
72.8
mean pLDDT
Taxonomy
Pararnavirae›
Artverviricota›
Revtraviricetes›
Ortervirales›
Caulimoviridae›
Solendovirus›
Sweet_potato_vein_clearing_virus
TaxID: 995049
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 5-67
Domain cluster:
representative
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4026646 | 3567.1.1.0 ↗ | a+b duplicates or obligate multimers › MPER trimer › MPER trimer › MPER trimer | 0.66 | 49.0 | 4.46e-01 | 79.4% | 65.9% |
| 3394753 | 192.5.1.12 ↗ | alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat › PH_19 | 0.64 | 47.0 | 4.55e-01 | 79.4% | 78.6% |
| 3243897 | 3684.1.1.0 ↗ | alpha complex topology › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like | 0.63 | 47.0 | 3.58e-01 | 79.4% | 85.0% |
| 4927414 | 1075.3.1.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC importer transmembrane domain fold › Type I ABC importer transmembrane domain fold › BPD_transp_1 | 0.60 | 52.0 | 3.41e-01 | 100.0% | 27.5% |