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hypothetical_protein_SWSSV_gp078

Euk-Vir

White_spot_syndrome_virus

hypothetical_protein_SWSSV_gp078__YP_009220552__White_spot_syndrome_virus__342409

Identity

Accession:
YP_009220552 ↗
Protein ID:
hypothetical_protein_SWSSV_gp078
Kingdom:
euk

Quality

65.7 mean pLDDT

Taxonomy

Naldaviricetes› Nimaviridae› Whispovirus› White_spot_syndrome_virus

TaxID: 342409

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 22-93
PDB
Domain cluster: rep: hypothetical_protein_SWSSV_gp171__YP_009220645__White_spot_syndrome_virus__342409__D27-98
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF09625.16 best VP9 115.9 1.00e-33 100.0% 91.1%
CATH (87)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2gj2A00 3.30.70.2070 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › VP9 protein domain 0.98 95.0 9.13e-01 100.0% 91.1%
5zneA00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.73 63.0 6.34e-01 95.8% 94.5%
3e8oB00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.72 62.0 5.58e-01 95.8% 86.0%
3tj8A02 3.30.70.790 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › UreE, C-terminal domain 0.72 53.0 5.31e-01 94.4% 77.0%
2djwA01 3.30.70.920 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain 0.71 62.0 6.21e-01 95.8% 93.2%
4hl9A00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.70 61.0 5.57e-01 95.8% 91.5%
1fvqA00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.70 61.0 6.18e-01 95.8% 97.2%
1mwyA00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.70 61.0 6.15e-01 95.8% 94.5%
3e0mC01 3.30.1060.10 Alpha Beta › 2-Layer Sandwich › Peptide Methionine Sulfoxide Reductase; Chain A › Peptide methionine sulphoxide reductase MsrA 0.70 61.0 4.64e-01 95.8% 59.1%
1konA03 3.30.70.980 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › YebC, transcriptional regulation domain 0.70 54.0 5.35e-01 95.8% 80.0%
4lwjA00 3.30.1060.10 Alpha Beta › 2-Layer Sandwich › Peptide Methionine Sulfoxide Reductase; Chain A › Peptide methionine sulphoxide reductase MsrA 0.70 60.0 4.34e-01 95.8% 44.4%
2kt2A00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.70 59.0 6.09e-01 93.1% 98.6%
2zbcA01 3.30.70.920 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain 0.70 62.0 6.22e-01 97.2% 95.9%
1ff3A00 3.30.1060.10 Alpha Beta › 2-Layer Sandwich › Peptide Methionine Sulfoxide Reductase; Chain A › Peptide methionine sulphoxide reductase MsrA 0.70 60.0 4.28e-01 95.8% 46.9%
2l3mA00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.69 58.0 5.91e-01 91.7% 95.8%
2cyyA02 3.30.70.920 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain 0.69 61.0 5.51e-01 97.2% 72.6%
4u9rA01 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.69 55.0 5.26e-01 86.1% 95.1%
2d9oA00 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.69 59.0 5.30e-01 95.8% 78.0%
1z1dB00 3.40.1310.20 Alpha Beta › 3-Layer(aba) Sandwich › Replication Protein E1; Chain: A, › 0.68 61.0 5.03e-01 100.0% 57.3%
1cc8A00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.68 59.0 5.99e-01 95.8% 95.8%
2dbbA02 3.30.70.920 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain 0.68 60.0 5.47e-01 95.8% 76.3%
1wexA01 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.68 58.0 5.86e-01 94.4% 98.6%
2cg4A02 3.30.70.920 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain 0.68 60.0 5.73e-01 97.2% 84.5%
3jb9a02 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.68 53.0 5.61e-01 94.4% 96.8%
2lqjA00 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.68 58.0 5.34e-01 95.8% 84.0%
2gqqA02 3.30.70.920 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain 0.68 59.0 5.63e-01 95.8% 84.7%
1afiA00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.68 59.0 5.94e-01 95.8% 98.6%
2kkhA01 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.68 57.0 5.71e-01 94.4% 93.3%
1i1gA02 3.30.70.920 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain 0.68 59.0 5.81e-01 95.8% 89.6%
3dfeA00 3.30.70.120 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.68 58.0 5.61e-01 95.8% 86.6%
3i4pA02 3.30.70.920 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain 0.68 59.0 5.60e-01 95.8% 84.5%
2p5vA02 3.30.70.920 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain 0.68 59.0 5.62e-01 97.2% 85.7%
2g9oA00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.67 58.0 5.76e-01 95.8% 96.1%
2jsxA01 3.30.70.920 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain 0.67 58.0 5.86e-01 95.8% 95.8%
4pcqA02 3.30.70.920 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain 0.67 58.0 5.55e-01 95.8% 84.5%
2e5gA01 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.67 57.0 5.79e-01 95.8% 100.0%
1qupA01 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.67 55.0 5.65e-01 94.4% 94.3%
4rr5A02 3.30.70.250 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding 0.67 50.0 5.24e-01 95.8% 90.6%
1el6A03 3.90.1160.10 Alpha Beta › Alpha-Beta Complex › Baseplate Structural Protein Gp11; Chain: A, domain 3 › Baseplate structural protein gp11, finger domain 0.67 58.0 5.05e-01 95.8% 91.7%
2cpxA01 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.67 57.0 5.59e-01 95.8% 97.5%
4ch7A02 3.30.70.3460 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.67 58.0 4.30e-01 97.2% 38.7%
2pd1A01 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.67 57.0 5.23e-01 95.8% 88.4%
2ijrA01 3.30.70.1270 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Api92-like domains 0.67 56.0 5.16e-01 97.2% 71.1%
2aymA00 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.67 58.0 5.56e-01 98.6% 91.6%
1zpvA00 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.66 56.0 5.34e-01 95.8% 92.9%
2efpA02 3.30.70.920 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain 0.66 55.0 5.05e-01 95.8% 74.5%
2qz8A02 3.30.70.920 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain 0.66 56.0 5.46e-01 97.2% 85.2%
3d2wA00 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.65 56.0 5.67e-01 95.8% 97.2%
1whvA00 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.65 53.0 4.78e-01 95.8% 65.0%
3to8A01 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.65 55.0 4.95e-01 95.8% 71.8%
1hl6C00 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.65 56.0 4.89e-01 97.2% 71.2%
2cpjA00 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.65 55.0 5.01e-01 95.8% 72.7%
1kn6A00 3.30.70.850 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Peptidase S8, pro-domain 0.65 55.0 5.49e-01 95.8% 97.3%
3im8A02 3.30.70.250 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding 0.65 53.0 5.32e-01 95.8% 90.4%
3ajdA01 3.30.70.1170 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Sun protein; domain 3 0.65 50.0 5.31e-01 93.1% 100.0%
2jx2A00 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.64 54.0 5.16e-01 95.8% 79.3%
2cveA02 3.30.70.240 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.64 51.0 5.23e-01 94.4% 97.0%
3tqeA02 3.30.70.250 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding 0.64 53.0 5.29e-01 97.2% 91.8%
1x4dA00 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.64 54.0 4.93e-01 98.6% 77.5%
3znuA00 3.30.70.1060 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Dimeric alpha+beta barrel 0.64 55.0 5.06e-01 97.2% 86.2%
3ewgA00 3.30.70.940 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › NusG, N-terminal domain 0.64 54.0 5.27e-01 94.4% 86.3%
2ahoB03 3.30.70.1130 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › EIF_2_alpha 0.64 53.0 5.01e-01 94.4% 98.9%
6lxgA01 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.64 52.0 5.21e-01 93.1% 100.0%
3tviA02 3.30.2130.10 Alpha Beta › 2-Layer Sandwich › VC0802-like › VC0802-like 0.64 52.0 4.18e-01 95.8% 46.5%
2wbmA03 3.30.70.240 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.63 52.0 5.33e-01 97.2% 97.1%
1q5yC00 3.30.70.1150 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT-like. Chain A, domain 2 0.63 53.0 5.16e-01 95.8% 90.2%
2qmwA03 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.63 53.0 5.24e-01 95.8% 98.7%
4c2mA09 3.30.70.2850 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.63 50.0 3.81e-01 87.5% 89.1%
4xchA00 3.30.1360.80 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › S-ribosylhomocysteinase (LuxS) 0.63 54.0 4.31e-01 97.2% 87.9%
4pg4B03 3.30.70.3100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.63 52.0 5.16e-01 97.2% 90.7%
1ygyA04 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.63 53.0 5.23e-01 97.2% 96.1%
3nrbB01 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.62 52.0 5.00e-01 97.2% 94.0%
3mahA01 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.62 49.0 5.01e-01 88.9% 90.0%
2nyiA01 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.62 52.0 5.10e-01 95.8% 88.9%
7veeA02 3.40.366.10 Alpha Beta › 3-Layer(aba) Sandwich › Malonyl-Coenzyme A Acyl Carrier Protein; domain 2 › Malonyl-Coenzyme A Acyl Carrier Protein, domain 2 0.62 47.0 3.15e-01 95.8% 19.3%
2exuA02 3.30.70.940 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › NusG, N-terminal domain 0.61 51.0 4.75e-01 94.4% 82.8%
3dkxA01 3.40.1310.30 Alpha Beta › 3-Layer(aba) Sandwich › Replication Protein E1; Chain: A, › 0.61 50.0 4.25e-01 98.6% 62.7%
2kdoA03 3.30.70.240 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.60 49.0 4.75e-01 95.8% 82.5%
2asyA00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.60 49.0 4.53e-01 95.8% 81.2%
2vd3A03 3.30.70.120 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.60 48.0 4.86e-01 95.8% 90.5%
1nh8A03 3.30.70.120 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.59 47.0 4.84e-01 95.8% 97.0%
2uv8A06 3.30.70.2490 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.58 41.0 4.20e-01 73.6% 82.1%
2go8A01 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.58 49.0 4.86e-01 95.8% 91.9%
4gaaA01 2.60.40.1730 Mainly Beta › Sandwich › Immunoglobulin-like › tricorn interacting facor f3 domain 0.57 49.0 3.67e-01 98.6% 56.0%
4o1pD02 1.10.510.10 Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 0.56 42.0 2.99e-01 84.7% 52.0%
3kxyJ00 3.30.1460.10 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.55 43.0 3.70e-01 90.3% 74.4%
3m4xA01 3.30.70.1170 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Sun protein; domain 3 0.52 38.0 3.59e-01 95.8% 63.6%
ECOD (99)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
305987 304.144.1.1 ↗ a+b two layers › Alpha-beta plaits › WSSV VP9 › WSSV VP9 › VP9 0.90 84.0 8.00e-01 100.0% 87.8%
5051103 304.4.1.0 ↗ a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel 0.78 65.0 6.60e-01 94.4% 92.9%
4972707 304.4.1.1 ↗ a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg 0.74 61.0 5.81e-01 95.8% 75.3%
4959923 304.8.1.0 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.74 64.0 6.54e-01 94.4% 98.6%
3967386 304.163.1.0 ↗ a+b two layers › Alpha-beta plaits › ATP-binding protein TM_1403 insertion domain › ATP-binding protein TM_1403 insertion domain 0.74 62.0 6.29e-01 95.8% 94.3%
4040528 304.24.1.16 ↗ a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › PrmA 0.74 63.0 5.86e-01 94.4% 83.3%
3289145 304.4.1.0 ↗ a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel 0.73 61.0 5.81e-01 97.2% 76.5%
5023279 304.3.1.0 ↗ a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain 0.73 56.0 6.07e-01 95.8% 98.3%
3781988 304.9.1.1 ↗ a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 0.73 63.0 5.86e-01 95.8% 79.8%
4948075 304.4.1.0 ↗ a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel 0.72 62.0 6.13e-01 95.8% 90.7%
4936431 304.3.1.0 ↗ a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain 0.72 62.0 6.12e-01 95.8% 93.3%
5059379 304.3.1.0 ↗ a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain 0.71 60.0 6.08e-01 94.4% 94.3%
5007793 304.4.1.1 ↗ a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg 0.71 60.0 5.67e-01 95.8% 77.6%
3386827 304.8.1.3 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NapD 0.71 61.0 5.49e-01 95.8% 69.5%
4989809 304.4.1.1 ↗ a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg 0.71 62.0 5.93e-01 95.8% 82.1%
5046859 304.4.1.1 ↗ a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg 0.71 61.0 5.66e-01 95.8% 75.6%
4942895 304.4.1.0 ↗ a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel 0.71 61.0 5.87e-01 95.8% 83.7%
4933397 304.4.1.1 ↗ a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg 0.70 62.0 6.01e-01 95.8% 86.3%
3551744 304.163.1.1 ↗ a+b two layers › Alpha-beta plaits › ATP-binding protein TM_1403 insertion domain › ATP-binding protein TM_1403 insertion domain › R1_ABCA1 0.70 61.0 6.04e-01 95.8% 93.3%
5046205 304.4.1.1 ↗ a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg 0.70 62.0 5.86e-01 95.8% 81.2%
5046683 304.4.1.1 ↗ a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg 0.70 62.0 5.75e-01 95.8% 78.4%
5068045 304.4.1.0 ↗ a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel 0.70 62.0 6.13e-01 95.8% 92.0%
4942815 304.4.1.1 ↗ a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg 0.70 62.0 6.15e-01 95.8% 92.0%
4935623 304.4.1.1 ↗ a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg 0.70 62.0 5.84e-01 95.8% 82.4%
5060029 304.4.1.1 ↗ a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg 0.70 62.0 5.84e-01 95.8% 81.2%
4979575 304.4.1.1 ↗ a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg 0.70 62.0 5.99e-01 95.8% 87.5%
5030322 304.4.1.0 ↗ a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel 0.70 61.0 6.18e-01 94.4% 97.1%
3288354 304.4.1.1 ↗ a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg 0.70 61.0 5.66e-01 97.2% 76.7%
4972147 304.4.1.1 ↗ a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg 0.70 61.0 5.93e-01 97.2% 87.5%
4963999 304.4.1.1 ↗ a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg 0.70 61.0 6.04e-01 95.8% 92.0%
5037431 304.4.1.1 ↗ a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg 0.70 60.0 5.80e-01 95.8% 85.0%
4189792 304.4.1.1 ↗ a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg 0.69 60.0 5.42e-01 97.2% 73.0%
4928613 304.4.1.0 ↗ a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel 0.69 61.0 6.19e-01 95.8% 98.6%
3947510 304.4.1.1 ↗ a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg 0.69 61.0 5.54e-01 97.2% 76.8%
3200754 304.3.1.1 ↗ a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain › HMA 0.69 60.0 5.84e-01 95.8% 88.7%
5050177 304.4.1.0 ↗ a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel 0.69 59.0 4.95e-01 95.8% 56.3%
4287179 304.4.1.1 ↗ a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg 0.69 61.0 5.64e-01 95.8% 80.9%
4563109 304.3.1.1 ↗ a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain › HMA 0.69 62.0 5.76e-01 100.0% 100.0%
3978046 304.4.1.1 ↗ a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg 0.69 61.0 5.52e-01 97.2% 77.9%
4987580 304.4.1.1 ↗ a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg 0.69 58.0 5.42e-01 95.8% 74.4%
4928610 304.4.1.1 ↗ a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg 0.69 60.0 5.85e-01 95.8% 86.3%
4176322 304.8.1.3 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NapD 0.69 58.0 5.60e-01 95.8% 82.5%
4930005 304.4.1.1 ↗ a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg 0.69 60.0 5.58e-01 95.8% 77.8%
5033040 304.4.1.0 ↗ a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel 0.69 58.0 4.81e-01 95.8% 52.3%
4979333 304.4.1.1 ↗ a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg 0.69 61.0 5.89e-01 97.2% 87.5%
5052883 304.4.1.29 ↗ a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg_3 0.69 60.0 5.48e-01 97.2% 74.7%
4038023 304.4.1.1 ↗ a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg 0.69 60.0 5.61e-01 97.2% 77.8%
3287039 304.4.1.1 ↗ a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg 0.69 60.0 5.48e-01 97.2% 73.7%
4933084 304.4.1.1 ↗ a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg 0.69 59.0 5.61e-01 95.8% 80.0%
3278158 304.4.1.1 ↗ a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg 0.69 61.0 5.78e-01 97.2% 85.9%
4987909 304.4.1.1 ↗ a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg 0.69 60.0 5.45e-01 95.8% 75.8%
4966152 304.4.1.0 ↗ a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel 0.69 58.0 5.76e-01 97.2% 89.3%
3663293 304.12.1.10 ↗ a+b two layers › Alpha-beta plaits › Ribosomal protein S6 › Ribosomal protein S6 › ABCA12_C 0.68 58.0 5.95e-01 95.8% 100.0%
4987469 304.8.1.3 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NapD 0.68 58.0 5.87e-01 95.8% 94.3%
160731 304.4.1.1 ↗ a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg 0.68 59.0 5.88e-01 95.8% 92.0%
3552754 304.163.1.1 ↗ a+b two layers › Alpha-beta plaits › ATP-binding protein TM_1403 insertion domain › ATP-binding protein TM_1403 insertion domain › R1_ABCA1 0.68 59.0 5.69e-01 95.8% 91.3%
4981472 304.4.1.1 ↗ a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg 0.68 60.0 5.67e-01 97.2% 82.4%
3968732 304.4.1.1 ↗ a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg 0.68 59.0 5.39e-01 95.8% 75.8%
4938850 304.4.1.1 ↗ a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg 0.68 60.0 5.44e-01 97.2% 74.7%
3963920 304.4.1.1 ↗ a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg 0.68 59.0 5.31e-01 97.2% 72.0%
3819968 304.24.1.20 ↗ a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › ABCA12_C 0.68 57.0 5.28e-01 95.8% 74.5%
3947003 304.4.1.1 ↗ a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg 0.67 58.0 5.36e-01 97.2% 76.8%
4984647 304.4.1.1 ↗ a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg 0.67 58.0 5.38e-01 97.2% 75.6%
4988131 304.4.1.1 ↗ a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg 0.67 54.0 5.30e-01 97.2% 81.2%
4081394 304.4.1.1 ↗ a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg 0.67 58.0 5.56e-01 97.2% 85.9%
5077217 304.4.1.0 ↗ a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel 0.67 57.0 5.64e-01 95.8% 97.3%
3258106 304.33.1.0 ↗ a+b two layers › Alpha-beta plaits › CheY-binding domain of CheA › CheY-binding domain of CheA 0.67 58.0 5.72e-01 94.4% 96.0%
166656 304.4.1.1 ↗ a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg 0.67 58.0 5.38e-01 97.2% 81.1%
4995547 304.4.1.1 ↗ a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg 0.67 59.0 5.26e-01 97.2% 70.0%
1318644 304.4.1.20 ↗ a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg2 0.67 58.0 5.61e-01 98.6% 87.8%
5030497 304.4.1.1 ↗ a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg 0.66 58.0 5.32e-01 97.2% 80.9%
4945308 304.4.1.0 ↗ a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel 0.66 57.0 5.55e-01 97.2% 86.3%
3604080 304.4.1.1 ↗ a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg 0.66 57.0 5.30e-01 97.2% 75.3%
3795358 304.8.1.0 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.66 55.0 5.52e-01 95.8% 97.3%
5049192 304.4.1.0 ↗ a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel 0.66 56.0 5.33e-01 97.2% 80.0%
4543144 304.4.1.1 ↗ a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg 0.66 58.0 5.48e-01 97.2% 82.4%
5058264 304.4.1.1 ↗ a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg 0.66 57.0 5.26e-01 97.2% 81.9%
4981868 304.4.1.0 ↗ a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel 0.66 55.0 5.16e-01 95.8% 76.7%
4961378 304.4.1.0 ↗ a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel 0.65 57.0 5.31e-01 97.2% 83.3%
4496868 304.7.1.4 ↗ a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors › S8_pro-domain 0.65 56.0 5.37e-01 95.8% 82.4%
3916419 304.4.1.66 ↗ a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › S8_pro-domain 0.65 56.0 5.49e-01 97.2% 91.3%
3974796 304.4.1.1 ↗ a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg 0.65 54.0 4.94e-01 95.8% 74.0%
134075 304.9.1.15 ↗ a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RNA_bind 0.65 52.0 4.66e-01 95.8% 62.7%
3923666 304.7.1.0 ↗ a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors 0.65 55.0 5.12e-01 94.4% 85.6%
5075371 304.4.1.0 ↗ a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel 0.64 54.0 5.11e-01 95.8% 77.8%
4962212 304.4.1.1 ↗ a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg 0.64 56.0 5.20e-01 97.2% 83.3%
4419829 304.28.1.0 ↗ a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain 0.64 53.0 5.27e-01 95.8% 89.3%
4524601 304.117.1.6 ↗ a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in YebC › Ferredoxin-like domain in YebC › Sec_GG 0.64 51.0 5.05e-01 95.8% 86.7%
3769495 304.7.1.4 ↗ a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors › S8_pro-domain 0.63 54.0 5.19e-01 95.8% 82.4%
3934530 304.9.1.0 ↗ a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD 0.63 55.0 5.09e-01 95.8% 78.9%
3785470 304.24.1.6 ↗ a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › SBDS_C 0.63 53.0 5.10e-01 97.2% 88.2%
3852546 4954.1.1.0 ↗ a+b complex topology › central helical domain in RNA-polymerase beta-prime subunit › central helical domain in RNA-polymerase beta-prime subunit › central helical domain in RNA-polymerase beta-prime subunit 0.63 50.0 3.74e-01 87.5% 94.7%
5057051 304.130.1.0 ↗ a+b two layers › Alpha-beta plaits › Uncharacterized protein MK0293 N-terminal domain › Uncharacterized protein MK0293 N-terminal domain 0.63 52.0 5.21e-01 95.8% 90.7%
3912204 304.7.1.4 ↗ a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors › S8_pro-domain 0.62 53.0 5.27e-01 94.4% 92.0%
3190455 304.4.1.0 ↗ a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel 0.61 50.0 4.75e-01 95.8% 86.7%
4080042 304.33.1.2 ↗ a+b two layers › Alpha-beta plaits › CheY-binding domain of CheA › CheY-binding domain of CheA › CheY-binding 0.61 52.0 5.05e-01 100.0% 88.7%
4102298 304.24.1.0 ↗ a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like 0.60 48.0 4.76e-01 95.8% 85.3%
3798494 304.24.1.0 ↗ a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like 0.60 49.0 4.60e-01 94.4% 76.7%
4990222 304.4.1.20 ↗ a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg2 0.56 45.0 4.17e-01 95.8% 69.5%
D2 high residues 103-262
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF07056.17 best DUF1335 212.8 2.30e-63 76.9% 93.9%
CATH (1)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2dchX02 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.54 30.0 3.45e-01 70.0% 73.0%
ECOD (2)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3947416 101.1.9.88 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › Phage_pRha 0.63 39.0 4.55e-01 72.5% 89.1%
3941747 101.1.9.78 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › AntA 0.59 38.0 4.49e-01 72.5% 94.5%
D3 high residues 268-349
PDB
D4 high residues 369-497_512-543
PDB
Domain cluster: representative
CATH (12)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1d3bC00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.66 19.0 2.97e-01 75.8% 59.2%
1s12A00 3.30.70.1490 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Cysteine protease Prp 0.60 34.0 4.29e-01 92.5% 94.7%
3wdhA01 2.60.40.2320 Mainly Beta › Sandwich › Immunoglobulin-like › 0.57 26.0 3.20e-01 98.8% 66.7%
4oloB00 3.30.70.1710 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › BMC (bacterial microcompartment) domain 0.54 29.0 3.94e-01 80.7% 100.0%
1konA02 3.30.70.980 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › YebC, transcriptional regulation domain 0.53 27.0 3.43e-01 71.4% 84.4%
2ap1A01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.53 31.0 3.33e-01 95.0% 65.5%
1eu3A02 2.40.50.110 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.53 24.0 3.21e-01 95.7% 81.2%
2cpdA01 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.53 27.0 3.59e-01 90.1% 100.0%
5fmgG00 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.52 42.0 3.84e-01 86.3% 87.2%
1mw7A02 3.30.70.980 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › YebC, transcriptional regulation domain 0.51 28.0 3.69e-01 72.0% 97.7%
6qm7A00 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.51 42.0 3.67e-01 87.0% 86.1%
3aqoA01 3.30.70.3400 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.51 26.0 3.46e-01 88.2% 95.0%
ECOD (11)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4930866 305.1.1.0 ↗ a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase 0.65 31.0 4.40e-01 75.2% 97.3%
3943274 304.3.1.1 ↗ a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain › HMA 0.63 28.0 3.82e-01 87.6% 82.5%
3252775 3696.1.1.0 ↗ a+b two layers › DNA helicase UvsW N-terminal a+b domain-related › DNA helicase UvsW N-terminal a+b domain-related › DNA helicase UvsW N-terminal a+b domain-related 0.61 29.0 4.13e-01 70.2% 100.0%
3950768 304.8.1.0 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.60 25.0 3.79e-01 88.2% 93.8%
5081376 3696.1.1.0 ↗ a+b two layers › DNA helicase UvsW N-terminal a+b domain-related › DNA helicase UvsW N-terminal a+b domain-related › DNA helicase UvsW N-terminal a+b domain-related 0.59 27.0 3.88e-01 91.3% 97.1%
4643895 304.3.1.0 ↗ a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain 0.58 27.0 3.89e-01 90.7% 98.6%
4992482 4955.1.1.0 ↗ a+b two layers › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit 0.57 30.0 3.90e-01 74.5% 92.9%
3927505 304.3.1.0 ↗ a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain 0.57 29.0 3.83e-01 90.7% 95.0%
3603050 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.55 30.0 3.91e-01 90.1% 98.8%
4940497 304.128.1.0 ↗ a+b two layers › Alpha-beta plaits › ferredoxin-like domain in periplasmic region of MacB › ferredoxin-like domain in periplasmic region of MacB 0.53 32.0 3.94e-01 90.7% 98.0%
4981449 304.11.1.0 ↗ a+b two layers › Alpha-beta plaits › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Probable ACP-binding domain of malonyl-CoA ACP transacylase 0.51 25.0 3.42e-01 93.8% 97.3%