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hypothetical_protein_SWSSV_gp133
Euk-VirWhite_spot_syndrome_virus
hypothetical_protein_SWSSV_gp133__YP_009220607__White_spot_syndrome_virus__342409
Identity
- Accession:
- YP_009220607 ↗
- Protein ID:
- hypothetical_protein_SWSSV_gp133
- Kingdom:
- euk
Quality
70.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-130
D2
medium
residues 131-227
Domain cluster:
representative
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2au3A04 | 1.20.50.30 | Mainly Alpha › Up-down Bundle › Pheromone ER-1 › | 0.65 | 38.0 | 4.62e-01 | 80.4% | 100.0% |
| 3c2gB01 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.55 | 48.0 | 3.05e-01 | 99.0% | 21.8% |
| 1yuiA00 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.53 | 21.0 | 2.72e-01 | 80.4% | 59.3% |
| 4by6D02 | 1.25.40.800 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.53 | 47.0 | 3.63e-01 | 100.0% | 47.1% |
| 1c4zA01 | 3.90.1750.10 | Alpha Beta › Alpha-Beta Complex › Hect, E3 ligase catalytic domain fold › Hect, E3 ligase catalytic domains | 0.53 | 43.0 | 3.73e-01 | 91.8% | 84.4% |
| 3lfjB00 | 3.40.35.10 | Alpha Beta › 3-Layer(aba) Sandwich › Fructose Permease › Phosphotransferase system, sorbose subfamily IIB component | 0.52 | 39.0 | 3.32e-01 | 92.8% | 46.4% |
| 2if4A02 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.52 | 43.0 | 3.97e-01 | 96.9% | 68.4% |
| 3ibvB00 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.52 | 44.0 | 2.63e-01 | 100.0% | 11.1% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3497752 | 101.1.1.67 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_6 | 0.59 | 37.0 | 4.37e-01 | 71.1% | 93.8% |
| 3630454 | 109.3.1.2 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 | 0.57 | 45.0 | 3.30e-01 | 99.0% | 30.7% |
| 3859117 | 109.4.1.2231 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HEAT, HEAT_Maestro, HEAT_Maestro_2, HEAT_MROH2B_1st, HEAT_MROH2B_C | 0.55 | 49.0 | 2.82e-01 | 100.0% | 13.4% |
| 3935355 | 109.4.1.1950 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF30196 | 0.55 | 48.0 | 3.03e-01 | 100.0% | 23.3% |
| 4023617 | 109.4.1.356 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Fungal_trans | 0.54 | 47.0 | 3.01e-01 | 100.0% | 30.0% |
| 3722303 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.53 | 46.0 | 3.45e-01 | 96.9% | 44.8% |
| 3867664 | 109.3.1.96 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank+Ank_2+Ank_4 | 0.53 | 45.0 | 2.90e-01 | 94.8% | 53.7% |
| 3584269 | 109.4.1.1654 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › SYMPK_PTA1_N, Symplekin_C | 0.53 | 46.0 | 2.71e-01 | 100.0% | 18.4% |
| 4991997 | 2005.1.1.13 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › CTP_transf_like | 0.53 | 36.0 | 3.27e-01 | 97.9% | 49.3% |
| 3969883 | 5081.1.1.1 ↗ | alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › Rhomboid | 0.52 | 37.0 | 2.93e-01 | 74.2% | 60.5% |
| 3734007 | 109.4.1.681 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Fungal_trans_2 | 0.52 | 45.0 | 2.96e-01 | 100.0% | 29.7% |