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hypothetical_protein_SlsnVgp102

Euk-Vir

Spodoptera_littoralis_nucleopolyhedrovirus

hypothetical_protein_SlsnVgp102__YP_009505911__Spodoptera_littoralis_nucleopolyhedrovirus__10456

Identity

Accession:
YP_009505911 ↗
Protein ID:
hypothetical_protein_SlsnVgp102
Kingdom:
euk

Quality

59.8 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 159-182_200-347
PDB
Domain cluster: representative
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3a11B01 1.20.120.420 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › translation initiation factor eif-2b, domain 1 0.56 36.0 4.14e-01 91.9% 88.0%
2gfhA02 1.20.120.710 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Haloacid dehalogenase hydrolase-like domain 0.54 23.0 3.18e-01 77.3% 76.7%
2wpvE00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.54 39.0 3.37e-01 95.3% 46.4%
1sxjE03 1.20.272.10 Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › 0.51 29.0 3.57e-01 89.5% 92.8%
ECOD (2)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4026808 3914.1.1.0 alpha bundles › TMEM16 lipid scramblase transmembrane domain › TMEM16 lipid scramblase transmembrane domain › TMEM16 lipid scramblase transmembrane domain 0.54 44.0 3.21e-01 87.8% 54.9%
3520427 170.1.1.15 alpha bundles › Retrovirus capsid protein › Retrovirus capsid protein-C › Retrovirus capsid protein-C › Retrotran_gag_2 0.51 27.0 3.41e-01 86.6% 87.4%