←Back to structures
hypothetical_protein_SlsnVgp102
Euk-VirSpodoptera_littoralis_nucleopolyhedrovirus
hypothetical_protein_SlsnVgp102__YP_009505911__Spodoptera_littoralis_nucleopolyhedrovirus__10456
Identity
- Accession:
- YP_009505911 ↗
- Protein ID:
- hypothetical_protein_SlsnVgp102
- Kingdom:
- euk
Quality
59.8
mean pLDDT
Taxonomy
Naldaviricetes›
Lefavirales›
Baculoviridae›
Alphabaculovirus›
Spodoptera_littoralis_nucleopolyhedrovirus
TaxID: 10456
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 159-182_200-347
Domain cluster:
representative
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3a11B01 | 1.20.120.420 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › translation initiation factor eif-2b, domain 1 | 0.56 | 36.0 | 4.14e-01 | 91.9% | 88.0% |
| 2gfhA02 | 1.20.120.710 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Haloacid dehalogenase hydrolase-like domain | 0.54 | 23.0 | 3.18e-01 | 77.3% | 76.7% |
| 2wpvE00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.54 | 39.0 | 3.37e-01 | 95.3% | 46.4% |
| 1sxjE03 | 1.20.272.10 | Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › | 0.51 | 29.0 | 3.57e-01 | 89.5% | 92.8% |
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4026808 | 3914.1.1.0 ↗ | alpha bundles › TMEM16 lipid scramblase transmembrane domain › TMEM16 lipid scramblase transmembrane domain › TMEM16 lipid scramblase transmembrane domain | 0.54 | 44.0 | 3.21e-01 | 87.8% | 54.9% |
| 3520427 | 170.1.1.15 ↗ | alpha bundles › Retrovirus capsid protein › Retrovirus capsid protein-C › Retrovirus capsid protein-C › Retrotran_gag_2 | 0.51 | 27.0 | 3.41e-01 | 86.6% | 87.4% |