hypothetical_protein_SlsnVgp109

Euk-Vir

Spodoptera_littoralis_nucleopolyhedrovirus

hypothetical_protein_SlsnVgp109__YP_009505918__Spodoptera_littoralis_nucleopolyhedrovirus__10456

Identity

83.0 mean pLDDT

Naldaviricetes› Lefavirales› Baculoviridae› Alphabaculovirus› Spodoptera_littoralis_nucleopolyhedrovirus

TaxID: 10456

View cluster (40 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 16-242

PDB

Domain cluster: rep: ac18__YP_008378341__Hemileuca_sp._nucleopolyhedrovirus__1367203__D17-171_201-232_282-326

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF07134.18 best	AcMNPV_Orf18	193.7	6.40e-57	99.6%	62.4%

CATH (3)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
8owfA01	2.60.40.290	Mainly Beta › Sandwich › Immunoglobulin-like ›	0.55	19.0	2.65e-01	90.3%	55.9%
1jkgA00	3.10.450.50	Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, ›	0.54	27.0	3.43e-01	98.7%	77.0%
3vhxF00	2.60.40.4330	Mainly Beta › Sandwich › Immunoglobulin-like › Kinesin-like protein Kif23, Arf6-interacting domain	0.52	24.0	3.52e-01	95.6%	97.1%

ECOD (3)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4594248	243.1.1.2 ↗	a+b two layers › Cystatin-like › NTF2-like › NTF2-like › NTF2	0.54	27.0	3.41e-01	98.2%	76.4%
3764436	883.1.1.1 ↗	a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like › LBP_BPI_CETP	0.54	28.0	3.11e-01	84.1%	60.6%
5000380	327.7.1.0 ↗	a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like	0.53	20.0	3.33e-01	85.5%	100.0%

D2 high residues 273-403

PDB

Domain cluster: rep: hypothetical_protein__YP_002300606__Adoxophyes_orana_nucleopolyhedrovirus__542343__D251-376

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF07134.18 best	AcMNPV_Orf18	63.5	2.60e-17	64.1%	25.6%